ENTRY A03191 #type fragments TITLE antifreeze glycoprotein 3 - bald rockcod (fragments) ORGANISM #formal_name Pagothenia borchgrevinki #common_name bald rockcod DATE 05-Oct-1988 #sequence_revision 19-Nov-1988 #text_change 15-May-1998 ACCESSIONS A03191 REFERENCE A92083 #authors DeVries, A.L.; Vandenheede, J.; Feeney, R.E. #journal J. Biol. Chem. (1971) 246:305-308 #title Primary structure of freezing point-depressing glycoproteins. #cross-references MUID:71104882 #accession A03191 ##molecule_type protein ##residues 1-31 ##label DEV ##note the three major glycoproteins (3, 4, and 5) have the same amino-terminal sequence, Ala-Ala-Thr-Ala-Ala-Thr, and carboxyl-terminal Ala. Each protein is composed only of Ala and Thr residues in a ratio of 2:1 and arranged in the repeating sequence Ala-Ala-Thr ##note all threonine residues have carbohydrate (the disaccharide galactosyl-N-acetylgalactosamine) that is bound glycosidically; the three proteins may differ only in the number of repeating units of Ala-Ala-Thr REFERENCE A90178 #authors Lin, Y.; Duman, J.G.; DeVries, A.L. #journal Biochem. Biophys. Res. Commun. (1972) 46:87-92 #title Studies on the structure and activity of low molecular weight glycoproteins from an antarctic fish. #cross-references MUID:72056127 #contents annotation #note the small glycopeptides 7 and 8 appear to contain 20 and 14 residues, respectively, and to have the same amino-terminal sequence and carboxyl-terminal residue as the three major proteins; however, each has two proline residues (instead of one of the alanines in each of two repeating units) COMMENT This fish lives in Antarctic waters where it experiences water temperatures near -1.9 degrees C. Its blood has a freezing point of about -2.0 degrees, and 30% of the freezing-point depression is due mainly to the three major high molecular weight glycoproteins in the plasma. COMMENT The two small glycopeptides are present in a much higher concentration (5 times by weight) than the HMW glycoproteins but produce only a small depression effect. The exact physiological role of the small glycopeptides is not known. KEYWORDS glycoprotein FEATURE 3,6,9,12,15,18,21, 24,27,30 #binding_site carbohydrate (Thr) (covalent) #status experimental SUMMARY #length 31 #checksum 5375 SEQUENCE 5 10 15 20 25 30 1 A A T A A T A A T A A T A A T A A T A A T A A T A A T A A T 31/A /// ENTRY A05161 #type complete TITLE antifreeze protein B precursor - winter flounder ORGANISM #formal_name Pseudopleuronectes americanus #common_name winter flounder DATE 05-Jun-1987 #sequence_revision 05-Jun-1987 #text_change 24-Oct-2000 ACCESSIONS A05161 REFERENCE A05161 #authors Davies, P.L.; Hough, C.; Scott, G.K.; Ng, N.; White, B.N.; Hew, C.L. #journal J. Biol. Chem. (1984) 259:9241-9247 #cross-references MUID:84264559 #accession A05161 ##molecule_type DNA ##residues 1-82 ##label DAV ##cross-references GB:L00138; GB:J00929; NID:g343126; PIDN:AAB59964.1; PID:g457351 GENETICS #introns 19/2 CLASSIFICATION #superfamily antifreeze protein KEYWORDS antifreeze SUMMARY #length 82 #molecular-weight 7755 #checksum 349 SEQUENCE 5 10 15 20 25 30 1 M A L S L F T V G Q L I F L F W T M R I T E A S P D P A A K 31 A A P A A A A A P A A A A P D T A S D A A A A A A L T A A N 61 A K A A A E L T A D N A A A A A A A T A R G /// ENTRY A05162 #type complete TITLE antifreeze protein SS-3 - shorthorn sculpin ORGANISM #formal_name Myoxocephalus scorpius #common_name shorthorn sculpin, daddy sculpin DATE 05-Jun-1987 #sequence_revision 05-Jun-1987 #text_change 24-Oct-2000 ACCESSIONS A05162 REFERENCE A91150 #authors Hew, C.L.; Joshi, S.; Wang, N.C.; Kao, M.H.; Ananthanarayanan, V.S. #journal Eur. J. Biochem. (1985) 151:167-172 #title Structures of shorthorn sculpin antifreeze polypeptides. #cross-references MUID:85285003 #accession A05162 ##molecule_type protein ##residues 1-33 ##label HEW CLASSIFICATION #superfamily antifreeze protein KEYWORDS antifreeze SUMMARY #length 33 #molecular-weight 2939 #checksum 8095 SEQUENCE 5 10 15 20 25 30 1 M N A P A R A A A K T A A D A L A A A K K T A A D A A A A A 31 A A A /// ENTRY A05163 #type complete TITLE antifreeze protein SS-8 - shorthorn sculpin ORGANISM #formal_name Myoxocephalus scorpius #common_name shorthorn sculpin, daddy sculpin DATE 05-Jun-1987 #sequence_revision 05-Jun-1987 #text_change 24-Nov-1999 ACCESSIONS A05163 REFERENCE A91150 #authors Hew, C.L.; Joshi, S.; Wang, N.C.; Kao, M.H.; Ananthanarayanan, V.S. #journal Eur. J. Biochem. (1985) 151:167-172 #title Structures of shorthorn sculpin antifreeze polypeptides. #cross-references MUID:85285003 #accession A05163 ##molecule_type protein ##residues 1-45 ##label HEW CLASSIFICATION #superfamily antifreeze protein KEYWORDS antifreeze; blocked amino end; plasma FEATURE 9-45 #region alanine-rich\ 1 #modified_site blocked amino end (Met) #status experimental SUMMARY #length 45 #molecular-weight 4006 #checksum 777 SEQUENCE 5 10 15 20 25 30 1 M N G E T P A Q K A A R L A A A A A L A A K T A A D A A A K 31 A A A K A A A I A A A A A S A /// ENTRY A22592 #type complete TITLE antifreeze protein IIA7 precursor - winter flounder ORGANISM #formal_name Pseudopleuronectes americanus #common_name winter flounder DATE 05-Oct-1988 #sequence_revision 05-Oct-1988 #text_change 24-Oct-2000 ACCESSIONS A22592; S12604 REFERENCE A22592 #authors Gourlie, B.; Lin, Y.; Price, J.; De Vries, A.L.; Powers, D.; Huang, R.C.C. #journal J. Biol. Chem. (1984) 259:14960-14965 #title Winter flounder antifreeze proteins: a multigene family. #cross-references MUID:85054993 #accession A22592 ##molecule_type mRNA ##residues 1-91 ##label GOU ##cross-references GB:M10148; NID:g213579; PIDN:AAA49465.1; PID:g213580 REFERENCE S12604 #authors Gauthier, S.; Wu, Y.; Davies, P.L. #journal Nucleic Acids Res. (1990) 18:5303 #title Nucleotide sequence of a variant antifreeze protein gene. #cross-references MUID:90384854 #accession S12604 ##molecule_type DNA ##residues 1-63,'V',65-91 ##label GAU ##cross-references EMBL:X53718; NID:g64213; PIDN:CAA37754.1; PID:g3805952 GENETICS #introns 19/2 CLASSIFICATION #superfamily antifreeze protein KEYWORDS antifreeze; tandem repeat FEATURE 1-21 #domain signal sequence #status predicted #label SIG\ 22-91 #product antifreeze protein IIA7 #status predicted #label MAT SUMMARY #length 91 #molecular-weight 8326 #checksum 8524 SEQUENCE 5 10 15 20 25 30 1 M A L S L F T V G Q L I F L F W T M R I T E A N P D P A A K 31 A V P A A A A P D T A S D A A A A A A A T A A T A A A A A A 61 A T A A T A A K A A A L T A A N A A A A A A A T A A A A A R 91 G /// ENTRY A25213 #type complete TITLE antifreeze glycoprotein 8R - saffron cod ORGANISM #formal_name Eleginus gracilis #common_name saffron cod DATE 19-Nov-1988 #sequence_revision 19-Nov-1988 #text_change 31-Dec-1993 ACCESSIONS A25213 REFERENCE A92586 #authors Burcham, T.S.; Osuga, D.T.; Rao, B.N.N.; Bush, C.A.; Feeney, R.E. #journal J. Biol. Chem. (1986) 261:6384-6389 #title Purification and primary sequences of the major arginine-containing antifreeze glycopeptides from the fish Eleginus gracilis. #cross-references MUID:86196057 #accession A25213 ##molecule_type protein ##residues 1-16 ##label BUR KEYWORDS glycoprotein SUMMARY #length 16 #molecular-weight 1413 #checksum 9965 SEQUENCE 5 10 15 20 25 30 1 A A T A A T P A T A A T P A R A /// ENTRY A30238 #type complete TITLE antifreeze proteins - Atlantic wolffish ORGANISM #formal_name Anarhichas lupus #common_name Atlantic wolffish DATE 01-Dec-1989 #sequence_revision 30-Sep-1991 #text_change 24-Oct-2000 ACCESSIONS A30238; B30238 REFERENCE A30238 #authors Scott, G.K.; Hayes, P.H.; Fletcher, G.L.; Davies, P.L. #journal Mol. Cell. Biol. (1988) 8:3670-3675 #title Wolffish antifreeze protein genes are primarily organized as tandem repeats that each contain two genes in inverted orientation. #cross-references MUID:89127205 #accession A30238 ##molecule_type DNA ##residues 1-88 ##label SC1 ##cross-references GB:M22125; NID:g210958; PIDN:AAA74890.1; PID:g210959 #accession B30238 ##molecule_type DNA ##residues 1-68,'A',70-88 ##label SC2 ##cross-references GB:M22125 ##note the authors translated the codon GAC for residue 17 as Asp, CTG for residue 19 as Met, and CAA for residue 60 as ASN CLASSIFICATION #superfamily antifreeze protein SP1 KEYWORDS antifreeze SUMMARY #length 88 #molecular-weight 9438 #checksum 4282 SEQUENCE 5 10 15 20 25 30 1 M K S A I L T G L L F V L L C V D H L S S A S Q S V V A T Q 31 L I P I N T A L T P I M M K G Q V V N P A G I P F A E M S Q 61 I V G K Q V N R P V A K D E T L M P N M V K T Y R A A K /// ENTRY A30839 #type fragment TITLE antifreeze protein 12 - ocean pout (fragment) ORGANISM #formal_name Macrozoarces americanus #common_name ocean pout DATE 28-Feb-1990 #sequence_revision 28-Feb-1990 #text_change 24-Oct-2000 ACCESSIONS A30839 REFERENCE A31075 #authors Hew, C.L.; Wang, N.C.; Joshi, S.; Fletcher, G.L.; Scott, G.K.; Hayes, P.H.; Buettner, B.; Davies, P.L. #journal J. Biol. Chem. (1988) 263:12049-12055 #title Multiple genes provide the basis for antifreeze protein diversity and dosage in the ocean pout, Macrozoarces americanus. #cross-references MUID:88298890 #accession A30839 ##molecule_type protein ##residues 1-66 ##label HEW CLASSIFICATION #superfamily antifreeze protein SP1 KEYWORDS antifreeze SUMMARY #length 66 #checksum 2901 SEQUENCE 5 10 15 20 25 30 1/N Q A S V V A N Q L I P I N T A L T L V M M R S E V V T P V 31 G I P A E D I P R L V S M Q V N R A V P L G T T L M P D M V 61 K G Y P P A/ /// ENTRY A31075 #type complete TITLE antifreeze protein c10 precursor - ocean pout ORGANISM #formal_name Macrozoarces americanus #common_name ocean pout DATE 28-Feb-1990 #sequence_revision 28-Feb-1990 #text_change 24-Oct-2000 ACCESSIONS A31075 REFERENCE A31075 #authors Hew, C.L.; Wang, N.C.; Joshi, S.; Fletcher, G.L.; Scott, G.K.; Hayes, P.H.; Buettner, B.; Davies, P.L. #journal J. Biol. Chem. (1988) 263:12049-12055 #title Multiple genes provide the basis for antifreeze protein diversity and dosage in the ocean pout, Macrozoarces americanus. #cross-references MUID:88298890 #accession A31075 ##molecule_type mRNA ##residues 1-87 ##label HEW ##cross-references GB:M11790 CLASSIFICATION #superfamily antifreeze protein SP1 KEYWORDS antifreeze SUMMARY #length 87 #molecular-weight 9306 #checksum 2187 SEQUENCE 5 10 15 20 25 30 1 M K S V I L T G L L F V L L C V D H M T A S Q S V V A T Q L 31 I P M N S A L T P V M M E G K V T N P I G I P F A E M S Q M 61 V G K Q V N R P V A K G Q T I M P N M V K T Y A A G K /// ENTRY A34313 #type complete TITLE antifreeze protein II precursor - sea raven ALTERNATE_NAMES pro-antifreeze protein type II ORGANISM #formal_name Hemitripterus americanus #common_name sea raven DATE 10-Sep-1999 #sequence_revision 10-Sep-1999 #text_change 10-Sep-1999 ACCESSIONS A34313; A24602; PC2386; PC2387; S65733 REFERENCE A34313 #authors Hayes, P.H.; Scott, G.K.; Ng, N.F.L.; Hew, C.L.; Davies, P.L. #journal J. Biol. Chem. (1989) 264:18761-18767 #title Cystine-rich type II antifreeze protein precursor is initiated from the third AUG codon of its mRNA. #cross-references MUID:90036986 #accession A34313 ##molecule_type DNA; mRNA ##residues 1-37,'G',39-163 ##label HAY ##cross-references GB:J05100; NID:g213875; PIDN:AAA49618.1; PID:g213876 ##note there are 12-15 copies in the genome; the sequence of SR7 was determined ##note the initiator codon was determined ##note parts of this sequence, including the amino end of the mature protein, were determined by protein sequencing ##note the amino end of the mature protein is blocked REFERENCE A24602 #authors Ng, N.F.; Trinh, K.Y.; Hew, C.L. #journal J. Biol. Chem. (1986) 261:15690-15695 #title Structure of an antifreeze polypeptide precursor from the sea raven, Hemitripterus americanus. #cross-references MUID:87057207 #accession A24602 ##molecule_type mRNA ##residues 'MQRQQADTETREDISTAGLSIIFIVCTISTTR',1-163 ##label NGN ##cross-references GB:J02593; NID:g213873; PIDN:AAA49617.1; PID:g213874 ##note parts of this sequence were determined by protein sequencing REFERENCE PC2386 #authors Duncker, B.P.; Gauthier, S.Y.; Davies, P.L. #journal Biochem. Biophys. Res. Commun. (1994) 203:1851-1857 #title Cystine-rich fish antifreeze is produced as an active proprotein precursor in fall armyworm cells. #cross-references MUID:95032070 #accession PC2386 ##molecule_type mRNA ##residues 1-45 ##label DUN #accession PC2387 ##molecule_type protein ##residues 18-27 ##label DU2 REFERENCE S65733 #authors Duncker, B.P.; Gauthier, S.Y.; Davies, P.L. #journal Biochim. Biophys. Acta (1996) 1292:312-316 #title Evidence for a proprotein intermediate during maturation of type II antifreeze protein in sea raven, Hemitripterus americanus. #cross-references MUID:96176860 #accession S65733 ##molecule_type protein ##residues 18-22 ##label DUW GENETICS #introns 21/1; 66/3; 105/3; 142/1 CLASSIFICATION #superfamily tetranectin; C-type lectin homology KEYWORDS pyroglutamic acid FEATURE 1-17 #domain signal sequence #status predicted #label SIG\ 18-34 #domain propeptide #status experimental #label PRO\ 35-163 #product antifreeze protein II #status predicted #label MAT\ 41-159 #domain C-type lectin homology #label LCH\ 35 #modified_site pyrrolidone carboxylic acid (Gln) (in mature form) #status experimental\ 41-52,69-159, 135-151 #disulfide_bonds #status predicted SUMMARY #length 163 #molecular-weight 17509 #checksum 1944 SEQUENCE 5 10 15 20 25 30 1 M L T V S L L V C A M M A L T Q A N D D K I L K G T A T E A 31 G P V S Q R A P P N C P A G W Q P L G D R C I Y Y E T T A M 61 T W A L A E T N C M K L G G H L A S I H S Q E E H S F I Q T 91 L N A G V V W I G G S A C L Q A G A W T W S D G T P M N F R 121 S W C S T K P D D V L A A C C M Q M T A A A D Q C W D D L P 151 C P A S H K S V C A M T F /// ENTRY A38420 #type complete TITLE antifreeze glycoprotein precursor - black rockcod ORGANISM #formal_name Notothenia coriiceps neglecta #common_name black rockcod DATE 28-Jun-1991 #sequence_revision 30-Jan-1993 #text_change 09-Sep-1997 ACCESSIONS A38420 REFERENCE A38420 #authors Hsiao, K.C.; Cheng, C.H.C.; Fernandes, I.E.; Detrich, H.W.; DeVries, A.L. #journal Proc. Natl. Acad. Sci. U.S.A. (1990) 87:9265-9269 #title An antifreeze glycopeptide gene from the antarctic cod Notothenia coriiceps neglecta encodes a polyprotein of high peptide copy number. #cross-references MUID:91067687 #accession A38420 ##status preliminary ##molecule_type DNA ##residues 1-822 ##label HSI ##cross-references GB:M55000; NID:g213391; PID:g213392 ##note the authors translated the codon CCT for residue 489 as Ala KEYWORDS glycoprotein SUMMARY #length 822 #molecular-weight 74669 #checksum 6246 SEQUENCE 5 10 15 20 25 30 1 M F V V E D N K C I S F S V C V C V C V C V C V S V C V C E 31 T A V T A A P A A T A A T A A T P A T A A L N F A A T A A T 61 P A T P A T P A L I F A A T A A T A A T P A T A A L N F A A 91 T A A T P A T A A T P A L I F A A A A A T A A T P A T A A L 121 N F A A T A A T P A T A A T P A L I F A A T A A T A A T P A 151 T P A F H F A A T A A T P A T A A T P A L I F A A T A A T A 181 A T P A T P A F H F A A T A A T P A T A A T P A L I F A A T 211 A A T A A T P A T A A L N F A A T A A T P A T A A T P A L I 241 F A A T A A T A A T P A T A A L N F A A T A A T A A T P A T 271 A A C N F A A T A A T P A T A A T P A L I F A A T A A T A A 301 T P A T A A C N F A A T A A T P A T A A T P A L I F A A T A 331 A T A A T P A T A A L N F A A T A A T P A T A A T P A L I F 361 A A T A A T A A T P A T A A L N F A A T A A T P A T A A T P 391 A L I F A A T A A T A A T P A T A A L N F A A T A A T A A T 421 P A T P A F N F A A T A A T P A T A A T P A L I F A A T A A 451 T A A T P A T A A L N F A A T A A T P A T A A T P A L I F A 481 A T A A T A A T P A T A A L H F A A T A A T A A T P A T A A 511 L N F A A T A A T P A T A A T P A L I F A A T A A T A A T P 541 A T A A F N F A A T A A T A A T P A T A A L N F A A T A A T 571 P A T A A T P A L I F A A T A A T A A T P A T A A L N F A A 601 T A A T P A T A A T P A L I F A A T A A T A A T P A T P A F 631 H F A A T A A T P A T A A T P A L I F A A T A A T A A T P A 661 T A A L N F A A T A A T A A T P A T A A L N F A A T A A T P 691 A T A A T P A L I F A A T A A T A A T P A T A A L N F A A T 721 A A T P A T A A T P A L I F A A T A A T A A T P A T A A F N 751 F A A T A A T A A T P A T A A T P A L I F A A T A A T A A T 781 P A T P A T P A L I F A A T A A T A A T P A T P A L N F A A 811 T A A T A A T T A A R G /// ENTRY A59010 #type complete TITLE antifreeze protein LS-12 - longhorn sculpin ORGANISM #formal_name Myoxocephalus octodecimspinosis #common_name longhorn sculpin DATE 10-Oct-1997 #sequence_revision 10-Oct-1997 #text_change 07-May-1999 ACCESSIONS A59010 REFERENCE A59010 #authors Deng, G.; Andrews, D.W.; Laursen, R.A. #journal FEBS Lett. (1997) 402:17-20 #cross-references MUID:97165956 #accession A59010 ##status preliminary ##molecule_type protein ##residues 1-108 ##label LAU ##experimental_source blood plasma KEYWORDS antifreeze; plasma; pyroglutamic acid FEATURE 1 #modified_site pyrrolidone carboxylic acid (Gln) #status experimental SUMMARY #length 108 #molecular-weight 12315 #checksum 5099 SEQUENCE 5 10 15 20 25 30 1 Q G A A D L E S L G Q Y F E E M K T K L I Q D M T E I I R S 31 Q D L A N Q A Q A F V E D K K T Q L Q P L V A Q I Q E Q M K 61 T V A T N V E E Q I R P L T A N V Q A H L Q P Q I D N F Q K 91 Q M E A I I K K L T D Q T M A I E N /// ENTRY B25213 #type complete TITLE antifreeze glycoprotein 7R - saffron cod ORGANISM #formal_name Eleginus gracilis #common_name saffron cod DATE 19-Nov-1988 #sequence_revision 19-Nov-1988 #text_change 31-Dec-1993 ACCESSIONS B25213 REFERENCE A92586 #authors Burcham, T.S.; Osuga, D.T.; Rao, B.N.N.; Bush, C.A.; Feeney, R.E. #journal J. Biol. Chem. (1986) 261:6384-6389 #title Purification and primary sequences of the major arginine-containing antifreeze glycopeptides from the fish Eleginus gracilis. #cross-references MUID:86196057 #accession B25213 ##molecule_type protein ##residues 1-19 ##label BUR KEYWORDS glycoprotein SUMMARY #length 19 #molecular-weight 1656 #checksum 3811 SEQUENCE 5 10 15 20 25 30 1 A A T A A T P A T A A T P A T A A R A /// ENTRY B30839 #type complete TITLE antifreeze protein lambda-3 precursor - ocean pout ORGANISM #formal_name Macrozoarces americanus #common_name ocean pout DATE 28-Feb-1990 #sequence_revision 28-Feb-1990 #text_change 24-Oct-2000 ACCESSIONS B30839 REFERENCE A31075 #authors Hew, C.L.; Wang, N.C.; Joshi, S.; Fletcher, G.L.; Scott, G.K.; Hayes, P.H.; Buettner, B.; Davies, P.L. #journal J. Biol. Chem. (1988) 263:12049-12055 #title Multiple genes provide the basis for antifreeze protein diversity and dosage in the ocean pout, Macrozoarces americanus. #cross-references MUID:88298890 #accession B30839 ##molecule_type DNA ##residues 1-91 ##label HEW ##cross-references GB:J03923; GB:J03924; NID:g213364; PIDN:AAA49348.1; PID:g213365 CLASSIFICATION #superfamily antifreeze protein SP1 KEYWORDS antifreeze SUMMARY #length 91 #molecular-weight 9912 #checksum 3641 SEQUENCE 5 10 15 20 25 30 1 M K S V I L T G L L F V L L C V D H M S S A N Q S V V A T Q 31 L I P I N T A L T L V M M T T R V I Y P T G I P A E D I P R 61 L V S M Q V N Q A V P M G T T L M P D M V K F Y C L C A P K 91 N /// ENTRY B31075 #type complete TITLE antifreeze protein c7 precursor - ocean pout ORGANISM #formal_name Macrozoarces americanus #common_name ocean pout DATE 28-Feb-1990 #sequence_revision 28-Feb-1990 #text_change 24-Oct-2000 ACCESSIONS B31075 REFERENCE A31075 #authors Hew, C.L.; Wang, N.C.; Joshi, S.; Fletcher, G.L.; Scott, G.K.; Hayes, P.H.; Buettner, B.; Davies, P.L. #journal J. Biol. Chem. (1988) 263:12049-12055 #title Multiple genes provide the basis for antifreeze protein diversity and dosage in the ocean pout, Macrozoarces americanus. #cross-references MUID:88298890 #accession B31075 ##molecule_type mRNA ##residues 1-87 ##label HEW ##cross-references GB:M11790 CLASSIFICATION #superfamily antifreeze protein SP1 KEYWORDS antifreeze SUMMARY #length 87 #molecular-weight 9229 #checksum 2098 SEQUENCE 5 10 15 20 25 30 1 M K S V I L T G L L F V L L C V D H M T A S Q S V V A T Q L 31 I P I N T A L T P V M M E G K V T N P I G I P F A E M S Q I 61 V G K Q V N T P V A K G Q T I M P N M V K T Y A A G K /// ENTRY C31075 #type complete TITLE antifreeze protein lambda-5 precursor - ocean pout ORGANISM #formal_name Macrozoarces americanus #common_name ocean pout DATE 28-Feb-1990 #sequence_revision 28-Feb-1990 #text_change 24-Oct-2000 ACCESSIONS C31075 REFERENCE A31075 #authors Hew, C.L.; Wang, N.C.; Joshi, S.; Fletcher, G.L.; Scott, G.K.; Hayes, P.H.; Buettner, B.; Davies, P.L. #journal J. Biol. Chem. (1988) 263:12049-12055 #title Multiple genes provide the basis for antifreeze protein diversity and dosage in the ocean pout, Macrozoarces americanus. #cross-references MUID:88298890 #accession C31075 ##molecule_type DNA ##residues 1-87 ##label HEW ##cross-references GB:J03921 CLASSIFICATION #superfamily antifreeze protein SP1 KEYWORDS antifreeze SUMMARY #length 87 #molecular-weight 9229 #checksum 2152 SEQUENCE 5 10 15 20 25 30 1 M K S V I L T G L L F V L L C V D H M T A S Q S V V A T Q L 31 I P I N T A L T P V M M E G K V T N P I G I P F A E M S Q I 61 V G K Q V N T P V A K G Q T L M P N M V K T Y A A G K /// ENTRY D31075 #type fragment TITLE antifreeze protein 1 - ocean pout (fragment) ORGANISM #formal_name Macrozoarces americanus #common_name ocean pout DATE 28-Feb-1990 #sequence_revision 28-Feb-1990 #text_change 24-Oct-2000 ACCESSIONS D31075 REFERENCE A31075 #authors Hew, C.L.; Wang, N.C.; Joshi, S.; Fletcher, G.L.; Scott, G.K.; Hayes, P.H.; Buettner, B.; Davies, P.L. #journal J. Biol. Chem. (1988) 263:12049-12055 #title Multiple genes provide the basis for antifreeze protein diversity and dosage in the ocean pout, Macrozoarces americanus. #cross-references MUID:88298890 #accession D31075 ##molecule_type protein ##residues 1-64 ##label HEW CLASSIFICATION #superfamily antifreeze protein SP1 KEYWORDS antifreeze SUMMARY #length 64 #checksum 9 SEQUENCE 5 10 15 20 25 30 1/S Q S V V A T Q L I P M N T A L T P V M M E G K V T N P I G 31 I P F A E M S Q I V G K Q V N T P V A K G Q T I M P N M V K 61 T Y A A/ /// ENTRY E31075 #type fragment TITLE antifreeze protein 4 - ocean pout (fragment) ORGANISM #formal_name Macrozoarces americanus #common_name ocean pout DATE 28-Feb-1990 #sequence_revision 28-Feb-1990 #text_change 24-Oct-2000 ACCESSIONS E31075 REFERENCE A31075 #authors Hew, C.L.; Wang, N.C.; Joshi, S.; Fletcher, G.L.; Scott, G.K.; Hayes, P.H.; Buettner, B.; Davies, P.L. #journal J. Biol. Chem. (1988) 263:12049-12055 #title Multiple genes provide the basis for antifreeze protein diversity and dosage in the ocean pout, Macrozoarces americanus. #cross-references MUID:88298890 #accession E31075 ##molecule_type protein ##residues 1-63 ##label HEW CLASSIFICATION #superfamily antifreeze protein SP1 KEYWORDS antifreeze SUMMARY #length 63 #checksum 9004 SEQUENCE 5 10 15 20 25 30 1/Q S V V A T Q L I P I N T A L T P A M M E G K V T N P I G I 31 P F A E M S Q I V G K Q V N T P V A K G Q T I M P N M V K T 61 Y A A/ /// ENTRY FDFI5G #type complete TITLE antifreeze protein GS-5 - grubby sculpin ORGANISM #formal_name Myoxocephalus aenaeus #common_name grubby sculpin DATE 31-Dec-1990 #sequence_revision 31-Dec-1990 #text_change 24-Nov-1999 ACCESSIONS S06417 REFERENCE S06417 #authors Chakrabartty, A.; Hew, C.L.; Shears, M.; Fletcher, G. #journal Can. J. Zool. (1988) 66:403-408 #title Primary structures of the alanine-rich antifreeze polypeptides from grubby sculpin, Myoxocephalus aenaeus. #accession S06417 ##molecule_type protein ##residues 1-33 ##label CHA CLASSIFICATION #superfamily antifreeze protein KEYWORDS antifreeze; blocked amino end FEATURE 1 #modified_site blocked amino end (Met) #status experimental SUMMARY #length 33 #molecular-weight 2980 #checksum 8836 SEQUENCE 5 10 15 20 25 30 1 M D A P A I A A A K T A A D A L A A A K K T A A D A A A A A 31 A K P /// ENTRY FDFI8G #type complete TITLE antifreeze protein GS-8 - grubby sculpin ORGANISM #formal_name Myoxocephalus aenaeus #common_name grubby sculpin DATE 31-Dec-1990 #sequence_revision 31-Dec-1990 #text_change 24-Nov-1999 ACCESSIONS S07046 REFERENCE S06417 #authors Chakrabartty, A.; Hew, C.L.; Shears, M.; Fletcher, G. #journal Can. J. Zool. (1988) 66:403-408 #title Primary structures of the alanine-rich antifreeze polypeptides from grubby sculpin, Myoxocephalus aenaeus. #accession S07046 ##molecule_type protein ##residues 1-40 ##label CHA CLASSIFICATION #superfamily antifreeze protein KEYWORDS antifreeze; blocked amino end FEATURE 1 #modified_site blocked amino end (Met) #status experimental SUMMARY #length 40 #molecular-weight 3579 #checksum 5679 SEQUENCE 5 10 15 20 25 30 1 M D G E T P A Q K A A R L A A A A A A L A A K T A A D A A A 31 K A A A I A A A A A /// ENTRY FDFICP #type complete TITLE antifreeze protein SP1-C precursor - ocean pout ORGANISM #formal_name Macrozoarces americanus #common_name ocean pout DATE 31-Mar-1988 #sequence_revision 31-Mar-1988 #text_change 22-Jun-1999 ACCESSIONS A24081; F31075 REFERENCE A24081 #authors Li, X.M.; Trinh, K.Y.; Hew, C.L.; Buettner, B.; Baenziger, J.; Davies, P.L. #journal J. Biol. Chem. (1985) 260:12904-12909 #title Structure of an antifreeze polypeptide and its precursor from the ocean pout, Macrozoarces americanus. #cross-references MUID:86033715 #accession A24081 ##molecule_type mRNA ##residues 1-87 ##label LIX ##cross-references GB:M11790; NID:g213362; PIDN:AAA49347.1; PID:g213363 REFERENCE A31075 #authors Hew, C.L.; Wang, N.C.; Joshi, S.; Fletcher, G.L.; Scott, G.K.; Hayes, P.H.; Buettner, B.; Davies, P.L. #journal J. Biol. Chem. (1988) 263:12049-12055 #title Multiple genes provide the basis for antifreeze protein diversity and dosage in the ocean pout, Macrozoarces americanus. #cross-references MUID:88298890 #accession F31075 ##molecule_type protein ##residues 23-86 ##label HEW COMMENT Ocean pout AFP has at least 12 components, which separate into SP1, SP2, SP3, and SP4 in ion-exchange chromatography. SP1 has 3 components; SP1-A, SP1-B and SP1-C. SP1-A differs from that shown at least in having 75-Ile and 84-Ala. SP1-B may be a posttranslational modification of SP1-C. CLASSIFICATION #superfamily antifreeze protein SP1 KEYWORDS antifreeze; plasma; pyroglutamic acid FEATURE 1-22 #domain signal sequence #status predicted #label SIG\ 23-87 #product antifreeze protein SP1-C #status experimental #label AFC\ 23 #modified_site pyrrolidone carboxylic acid (Gln) (in mature form) #status experimental SUMMARY #length 87 #molecular-weight 9229 #checksum 1879 SEQUENCE 5 10 15 20 25 30 1 M K S V I L T G L L F V L L C V D H M T A S Q S V V A T Q L 31 I P I N T A L T P A M M E G K V T N P I G I P F A E M S Q I 61 V G K Q V N T P V A K G Q T L M P N M V K T Y V A G K /// ENTRY FDFILC #type complete TITLE antifreeze protein LP - Canadian eelpout ORGANISM #formal_name Lycodes polaris #common_name Canadian eelpout DATE 30-Sep-1991 #sequence_revision 30-Sep-1991 #text_change 30-Jun-1993 ACCESSIONS S07150 REFERENCE S07150 #authors Schrag, J.D.; Cheng, C.H.C.; Panico, M.; Morris, H.R.; DeVries, A.L. #journal Biochim. Biophys. Acta (1987) 915:357-370 #title Primary and secondary structure of antifreeze peptides from arctic and antarctic zoarcid fishes. #cross-references MUID:88000728 #accession S07150 ##molecule_type protein ##residues 1-66 ##label SCH CLASSIFICATION #superfamily antifreeze protein SP1 KEYWORDS antifreeze SUMMARY #length 66 #molecular-weight 6982 #checksum 966 SEQUENCE 5 10 15 20 25 30 1 N K A S V V A N Q L I P I N T A L T L V M M R A E V V T P A 31 G I P A E D I P R L V G L Q V N R A V L I G T T L M P D M V 61 K G Y A P Q /// ENTRY FDFIRE #type complete TITLE antifreeze protein RD2 - eelpout (Lycodichthys dearborni) ORGANISM #formal_name Lycodichthys dearborni DATE 30-Sep-1991 #sequence_revision 30-Sep-1991 #text_change 26-Feb-1999 ACCESSIONS S08561; S53513 REFERENCE S07150 #authors Schrag, J.D.; Cheng, C.H.C.; Panico, M.; Morris, H.R.; DeVries, A.L. #journal Biochim. Biophys. Acta (1987) 915:357-370 #title Primary and secondary structure of antifreeze peptides from arctic and antarctic zoarcid fishes. #cross-references MUID:88000728 #accession S08561 ##molecule_type protein ##residues 1-64 ##label SCH ##note the source is designated as Rhigophila dearborni REFERENCE S53512 #authors Wang, X.; DeVries, A.L.; Cheng, C.H.C. #journal Biochim. Biophys. Acta (1995) 1247:163-172 #title Antifreeze peptide heterogeneity in an antarctic eel pout includes an unusually large major variant comprised of two 7 kDa type III AFPs linked in tandem. #cross-references MUID:95210308 #accession S53513 ##status preliminary ##molecule_type protein ##residues 1-64 ##label WAN CLASSIFICATION #superfamily antifreeze protein SP1 KEYWORDS antifreeze SUMMARY #length 64 #molecular-weight 6934 #checksum 9342 SEQUENCE 5 10 15 20 25 30 1 N K A S V V A N Q L I P I N T A L T L I M M K A E V V T P M 31 G I P A E D I P R I I G M Q V N R A V P L G T T L M P D M V 61 K N Y E /// ENTRY FDFL3W #type complete TITLE antifreeze protein 3 - winter flounder ORGANISM #formal_name Pseudopleuronectes americanus #common_name winter flounder DATE 01-Sep-1981 #sequence_revision 01-Sep-1981 #text_change 23-Aug-1996 ACCESSIONS A03192 REFERENCE A03192 #authors DeVries, A.L.; Lin, Y. #journal Biochim. Biophys. Acta (1977) 495:388-392 #title Structure of a peptide antifreeze and mechanism of adsorption to ice. #cross-references MUID:78060969 #accession A03192 ##molecule_type protein ##residues 1-37 ##label DEV CLASSIFICATION #superfamily antifreeze protein KEYWORDS antifreeze SUMMARY #length 37 #molecular-weight 3144 #checksum 7865 SEQUENCE 5 10 15 20 25 30 1 D T A S D A A A A A A L T A A B A A A A A K L T A B B A A A 31 A A A A T A A /// ENTRY FDFL4W #type complete TITLE antifreeze protein 4 precursor - winter flounder ORGANISM #formal_name Pseudopleuronectes americanus #common_name winter flounder DATE 01-Sep-1981 #sequence_revision 01-Sep-1981 #text_change 25-Apr-1997 ACCESSIONS A03193 REFERENCE A03193 #authors Lin, Y.; Gross, J.K. #journal Proc. Natl. Acad. Sci. U.S.A. (1981) 78:2825-2829 #title Molecular cloning and characterization of winter flounder antifreeze cDNA. #cross-references MUID:81247379 #accession A03193 ##molecule_type mRNA ##residues 1-85 ##label LIN CLASSIFICATION #superfamily antifreeze protein KEYWORDS antifreeze FEATURE 1-21 #domain signal sequence #status predicted #label SIG\ 22-85 #product antifreeze protein 4 #status predicted #label MAT SUMMARY #length 85 #molecular-weight 7243 #checksum 2205 SEQUENCE 5 10 15 20 25 30 1 M R I T E A N P D P D A K A V P A A A A P D T A S D A A A A 31 A A A T A A T A A A A A A A T A A T A A A A A A A T A A T A 61 A K A A A L T A A N A A A A A A A T A A A A A R G /// ENTRY FDFLAW #type complete TITLE antifreeze protein A precursor - winter flounder ORGANISM #formal_name Pseudopleuronectes americanus #common_name winter flounder DATE 13-Aug-1986 #sequence_revision 13-Aug-1986 #text_change 22-Jun-1999 ACCESSIONS JS0704; A03194 REFERENCE JH0627 #authors Davies, P.L. #journal Gene (1992) 112:163-170 #title Conservation of antifreeze protein-encoding genes in tandem repeats. #cross-references MUID:92209995 #accession JS0704 ##molecule_type DNA ##residues 1-82 ##label DA1 ##cross-references GB:M62412; GB:M62416; NID:g213592; PIDN:AAA49471.1; PID:g213593 REFERENCE A03194 #authors Davies, P.L.; Roach, A.H.; Hew, C.L. #journal Proc. Natl. Acad. Sci. U.S.A. (1982) 79:335-339 #title DNA sequence coding for an antifreeze protein precursor from winter flounder. #cross-references MUID:82197490 #accession A03194 ##molecule_type mRNA ##residues 1-82 ##label DA2 ##experimental_source clones 4-2b and 2A-7c ##note the authors translated the codon AGC for residue 24 as Arg GENETICS #introns 19/2 CLASSIFICATION #superfamily antifreeze protein KEYWORDS antifreeze; plasma; tandem repeat FEATURE 1-21 #domain signal sequence #status predicted #label SIG\ 22-44 #domain propeptide #status predicted #label PRO\ 45-82 #product antifreeze protein A #status predicted #label MAT SUMMARY #length 82 #molecular-weight 7711 #checksum 310 SEQUENCE 5 10 15 20 25 30 1 M A L S L F T V G Q L I F L F W T M R I T E A S P D P A A K 31 A A P A A A A A P A A A A P D T A S D A A A A A A L T A A N 61 A K A A A E L T A A N A A A A A A A T A R G /// ENTRY G31075 #type fragment TITLE antifreeze protein 7 - ocean pout (fragment) ORGANISM #formal_name Macrozoarces americanus #common_name ocean pout DATE 28-Feb-1990 #sequence_revision 28-Feb-1990 #text_change 24-Oct-2000 ACCESSIONS G31075 REFERENCE A31075 #authors Hew, C.L.; Wang, N.C.; Joshi, S.; Fletcher, G.L.; Scott, G.K.; Hayes, P.H.; Buettner, B.; Davies, P.L. #journal J. Biol. Chem. (1988) 263:12049-12055 #title Multiple genes provide the basis for antifreeze protein diversity and dosage in the ocean pout, Macrozoarces americanus. #cross-references MUID:88298890 #accession G31075 ##molecule_type protein ##residues 1-64 ##label HEW CLASSIFICATION #superfamily antifreeze protein SP1 KEYWORDS antifreeze SUMMARY #length 64 #checksum 9359 SEQUENCE 5 10 15 20 25 30 1/S Q S V V A T R L I P M N T A L T P A M M E G K V T N P I G 31 I P F A E M S Q I V G K Q V N R I V A K G Q T L M P N M V K 61 T Y A A/ /// ENTRY H31075 #type fragment TITLE antifreeze protein 9 - ocean pout (fragment) ORGANISM #formal_name Macrozoarces americanus #common_name ocean pout DATE 28-Feb-1990 #sequence_revision 28-Feb-1990 #text_change 24-Oct-2000 ACCESSIONS H31075 REFERENCE A31075 #authors Hew, C.L.; Wang, N.C.; Joshi, S.; Fletcher, G.L.; Scott, G.K.; Hayes, P.H.; Buettner, B.; Davies, P.L. #journal J. Biol. Chem. (1988) 263:12049-12055 #title Multiple genes provide the basis for antifreeze protein diversity and dosage in the ocean pout, Macrozoarces americanus. #cross-references MUID:88298890 #accession H31075 ##molecule_type protein ##residues 1-64 ##label HEW CLASSIFICATION #superfamily antifreeze protein SP1 KEYWORDS antifreeze SUMMARY #length 64 #checksum 9351 SEQUENCE 5 10 15 20 25 30 1/S Q S V V A T Q L I P M N T A L T P A M M E G K V T N P I G 31 I P F A E M S Q I V G K Q V N R I V A K G Q T L M P N M V K 61 T Y A A/ /// ENTRY I31075 #type fragment TITLE antifreeze protein 11 - ocean pout (fragment) ORGANISM #formal_name Macrozoarces americanus #common_name ocean pout DATE 28-Feb-1990 #sequence_revision 28-Feb-1990 #text_change 24-Oct-2000 ACCESSIONS I31075 REFERENCE A31075 #authors Hew, C.L.; Wang, N.C.; Joshi, S.; Fletcher, G.L.; Scott, G.K.; Hayes, P.H.; Buettner, B.; Davies, P.L. #journal J. Biol. Chem. (1988) 263:12049-12055 #title Multiple genes provide the basis for antifreeze protein diversity and dosage in the ocean pout, Macrozoarces americanus. #cross-references MUID:88298890 #accession I31075 ##molecule_type protein ##residues 1-62 ##label HEW CLASSIFICATION #superfamily antifreeze protein SP1 KEYWORDS antifreeze SUMMARY #length 62 #checksum 8795 SEQUENCE 5 10 15 20 25 30 1/S V V A T Q L I P I N T A L T P A M M E G K V T N P I G I P 31 F A E M S Q I V G K Q V N R I V A K G Q T L M P N M V K T Y 61 A A/ /// ENTRY I51125 #type complete TITLE antifreeze protein - winter flounder ORGANISM #formal_name Pseudopleuronectes americanus #common_name winter flounder DATE 13-Sep-1996 #sequence_revision 13-Sep-1996 #text_change 24-Oct-2000 ACCESSIONS I51125 REFERENCE I51125 #authors Pickett, M.; Scott, G.; Davies, P.; Wang, N.; Joshi, S.; Hew, C. #journal Eur. J. Biochem. (1984) 143:35-38 #title Sequence of an antifreeze protein precursor. #cross-references MUID:84285392 #accession I51125 ##status preliminary; translated from GB/EMBL/DDBJ ##molecule_type mRNA ##residues 1-82 ##label PIC ##cross-references GB:M28337; NID:g213581; PIDN:AAA49466.1; PID:g213582 GENETICS #gene AFP CLASSIFICATION #superfamily antifreeze protein KEYWORDS antifreeze SUMMARY #length 82 #molecular-weight 7697 #checksum 353 SEQUENCE 5 10 15 20 25 30 1 M A L S L F T V G Q L I F L F W T M R I T E A S P D P A A K 31 A A P A A A A A P A A A A P D T A S D A A A A A A L T A A N 61 A A A A A K L T A D N A A A A A A A T A R G /// ENTRY JH0626 #type complete TITLE antifreeze protein II precursor - rainbow smelt ORGANISM #formal_name Osmerus mordax #common_name rainbow smelt DATE 10-Sep-1999 #sequence_revision 10-Sep-1999 #text_change 10-Sep-1999 ACCESSIONS JH0626; PS0361 REFERENCE JH0626 #authors Ewart, K.V.; Rubinsky, B.; Fletcher, G.L. #journal Biochem. Biophys. Res. Commun. (1992) 185:335-340 #title Structural and functional similarity between fish antifreeze proteins and calcium-dependent lectins. #cross-references MUID:92287116 #accession JH0626 ##molecule_type mRNA ##residues 1-175 ##label EWA ##experimental_source liver #accession PS0361 ##molecule_type protein ##residues 145-154;162-173 ##label EWA1 COMMENT This protein lowers solution freezing points non-colligatively (antifreeze activity) and protects mammalian cells from damage at hypothermic temperatures. CLASSIFICATION #superfamily tetranectin; C-type lectin homology KEYWORDS glycoprotein FEATURE 1-16 #domain signal sequence #status predicted #label SIG\ 17-175 #product antifreeze protein II #status predicted #label ANT\ 38-159 #domain C-type lectin homology #label LCH\ 34 #binding_site carbohydrate (Asn) (covalent) #status predicted\ 38-49,66-159, 135-151 #disulfide_bonds #status predicted SUMMARY #length 175 #molecular-weight 19055 #checksum 8439 SEQUENCE 5 10 15 20 25 30 1 M L A A L L V C A M V A L T R A A N G D T G K E A V M T G S 31 S G K N L T E C P T D W K M F N G R C F L F N P L Q L H W A 61 H A Q I S C M K D G A N L A S I H S L E E Y A F V K E L T T 91 A G L I P A W I G G S D C H V S T Y W F W M D S T S M D F T 121 D W C A A Q P D F T L T E C C I Q I N V G V G K C W N D T P 151 C T H L H A S V C A K P A T V N P E V T P P S I M /// ENTRY JS0705 #type complete TITLE antifreeze protein (clones 1A-1a and 3-3a) - winter flounder ORGANISM #formal_name Pseudopleuronectes americanus #common_name winter flounder DATE 17-Aug-1992 #sequence_revision 17-Aug-1992 #text_change 24-Oct-2000 ACCESSIONS JS0705 REFERENCE JH0627 #authors Davies, P.L. #journal Gene (1992) 112:163-170 #title Conservation of antifreeze protein-encoding genes in tandem repeats. #cross-references MUID:92209995 #accession JS0705 ##molecule_type DNA ##residues 1-82 ##label DAV ##cross-references GB:M62413; NID:g213586; PIDN:AAA49468.1; PID:g213587 GENETICS #introns 19/2 CLASSIFICATION #superfamily antifreeze protein KEYWORDS antifreeze SUMMARY #length 82 #molecular-weight 7794 #checksum 1127 SEQUENCE 5 10 15 20 25 30 1 M A L S L F T V G Q L I F L F W T M R I T E A R P D P A A K 31 A A P A A A A V P A A A A P D T A S D A A A A A A L T A A N 61 A A A A A K L T A D N A A A A A A A T A R G /// ENTRY JS0706 #type complete TITLE antifreeze protein (clone 4-2c) - winter flounder ORGANISM #formal_name Pseudopleuronectes americanus #common_name winter flounder DATE 17-Aug-1992 #sequence_revision 17-Aug-1992 #text_change 24-Oct-2000 ACCESSIONS JS0706 REFERENCE JH0627 #authors Davies, P.L. #journal Gene (1992) 112:163-170 #title Conservation of antifreeze protein-encoding genes in tandem repeats. #cross-references MUID:92209995 #accession JS0706 ##molecule_type DNA ##residues 1-82 ##label DAV ##cross-references GB:M62417; NID:g213594; PIDN:AAA49472.1; PID:g213595 ##note the authors translated the codon AGC for residue 24 as Arg GENETICS #introns 19/2 CLASSIFICATION #superfamily antifreeze protein KEYWORDS antifreeze SUMMARY #length 82 #molecular-weight 7739 #checksum 1066 SEQUENCE 5 10 15 20 25 30 1 M A L S L F T V G Q L I F L F W T M R I T E A S P D P A A K 31 A A P A A V A A P A A A A P D T A S D A A A A A A L T A A N 61 A K A A A E L T A A N A A A A A A A T A R G /// ENTRY S02326 #type complete TITLE antifreeze protein A - winter flounder ORGANISM #formal_name Pseudopleuronectes americanus #common_name winter flounder DATE 30-Sep-1989 #sequence_revision 30-Sep-1989 #text_change 24-Oct-2000 ACCESSIONS S02326; JH0627 REFERENCE S02326 #authors Scott, G.K.; Davies, P.L.; Kao, M.H.; Fletcher, G.L. #journal J. Mol. Evol. (1988) 27:29-35 #title Differential amplification of antifreeze protein genes in the Pleuronectinae. #cross-references MUID:88259236 #accession S02326 ##molecule_type DNA ##residues 1-82 ##label SCO ##cross-references EMBL:X07506; NID:g64211; PIDN:CAA30389.1; PID:g64212 REFERENCE JH0627 #authors Davies, P.L. #journal Gene (1992) 112:163-170 #title Conservation of antifreeze protein-encoding genes in tandem repeats. #cross-references MUID:92209995 #accession JH0627 ##molecule_type DNA ##residues 1-82 ##label DAV ##cross-references GB:M62415 GENETICS #introns 19/2 CLASSIFICATION #superfamily antifreeze protein KEYWORDS antifreeze SUMMARY #length 82 #molecular-weight 7780 #checksum 286 SEQUENCE 5 10 15 20 25 30 1 M A L S L F T V G Q L I F L F W T M R I T E A R P D P A A K 31 A A P A A A A A P A A A A P D T A S D A A A A A A L T A A N 61 A K A A A E L T A A N A A A A A A A T A R G /// ENTRY S02376 #type complete TITLE antifreeze protein precursor - yellowtail flounder ORGANISM #formal_name Limanda ferruginea #common_name yellowtail flounder DATE 01-Dec-1989 #sequence_revision 01-Dec-1989 #text_change 24-Oct-2000 ACCESSIONS S02376 REFERENCE S02376 #authors Scott, G.K.; Davies, P.L.; Shears, M.A.; Fletcher, G.L. #journal Eur. J. Biochem. (1987) 168:629-633 #title Structural variations in the alanine-rich antifreeze proteins of the Pleuronectinae. #cross-references MUID:88029483 #accession S02376 ##molecule_type mRNA ##residues 1-97 ##label SCO ##cross-references EMBL:X06356; NID:g64041; PIDN:CAA29655.1; PID:g64042 ##note part of this sequence, including the amino end of the mature protein, was confirmed by protein sequencing CLASSIFICATION #superfamily antifreeze protein KEYWORDS antifreeze FEATURE 1-23 #domain signal sequence #status predicted #label SIG\ 24-48 #domain propeptide #status predicted #label PRO\ 49-96 #product antifreeze protein #status predicted #label MAT SUMMARY #length 97 #molecular-weight 8865 #checksum 3431 SEQUENCE 5 10 15 20 25 30 1 M A L S L F T V G Q L I F L F W T L R I T E A N P D P A A K 31 A A P A A V A D P A A A A A A A V A D T A S D A A A A A A A 61 T A A A A A K A A A D T A A A A A K A A A D T A A A A A E A 91 A A A T A R G /// ENTRY S04973 #type complete TITLE antifreeze protein AB1 - Antarctic eelpout ORGANISM #formal_name Austrolycichthys brachycephalus #common_name Antarctic eelpout DATE 07-Sep-1990 #sequence_revision 07-Sep-1990 #text_change 24-Oct-2000 ACCESSIONS S04973; B30095 REFERENCE S04973 #authors Cheng, C.H.C.; DeVries, A.L. #journal Biochim. Biophys. Acta (1989) 997:55-64 #title Structures of antifreeze peptides from the antarctic eel pout, Austrolycicthys brachycephalus. #cross-references MUID:89323219 #accession S04973 ##molecule_type protein ##residues 1-63 ##label CHE ##note the accession number A30095 cited as assigned by EMBL is not in GenBank release 101.0 CLASSIFICATION #superfamily antifreeze protein SP1 KEYWORDS antifreeze SUMMARY #length 63 #molecular-weight 6846 #checksum 7531 SEQUENCE 5 10 15 20 25 30 1 T K S V V A S Q L I P I N T A L T P A M M K A K E V S P K G 31 I P A E E M S K I V G M Q V N R A V N L D E T L M P D M V K 61 T Y Q /// ENTRY S04974 #type complete TITLE antifreeze protein AB2 - Antarctic eelpout ORGANISM #formal_name Austrolycichthys brachycephalus #common_name Antarctic eelpout DATE 07-Sep-1990 #sequence_revision 07-Sep-1990 #text_change 24-Oct-2000 ACCESSIONS S04974; A30095 REFERENCE S04973 #authors Cheng, C.H.C.; DeVries, A.L. #journal Biochim. Biophys. Acta (1989) 997:55-64 #title Structures of antifreeze peptides from the antarctic eel pout, Austrolycicthys brachycephalus. #cross-references MUID:89323219 #accession S04974 ##molecule_type protein ##residues 1-63 ##label CHE ##note the accession number A30095 cited as assigned by EMBL is not in GenBank release 101.0 CLASSIFICATION #superfamily antifreeze protein SP1 KEYWORDS antifreeze SUMMARY #length 63 #molecular-weight 7001 #checksum 8250 SEQUENCE 5 10 15 20 25 30 1 T K S V V A N Q L I P I N T A L T L V M M K A E E V S P K G 31 I P A E E I P R L V G M Q V N R A V Y L D E T L M P D M V K 61 N Y E /// ENTRY S11155 #type complete TITLE cold and ABA inducible protein kin1 - Arabidopsis thaliana ALTERNATE_NAMES protein F1N13_100 ORGANISM #formal_name Arabidopsis thaliana #common_name mouse-ear cress DATE 20-Feb-1995 #sequence_revision 20-Feb-1995 #text_change 02-Sep-2000 ACCESSIONS S11155; T51379 REFERENCE S11155 #authors Kurkela, S.; Franck, M. #journal Plant Mol. Biol. (1990) 15:137-144 #title Cloning and characterization of a cold- and ABA-inducible Arabidopsis gene. #cross-references MUID:91355846 #accession S11155 ##molecule_type DNA ##residues 1-66 ##label KUR ##cross-references EMBL:X51474; NID:g16349; PIDN:CAA35838.1; PID:g296033 ##note mRNA was also sequenced REFERENCE Z25393 #authors Sato, S.; Nakamura, Y.; Kaneko, T.; Kato, T.; Asamizu, E.; Kotani, H.; Tabata, S.; Bancroft, I.; Mewes, H.W.; Rudd, S.; Lemcke, K.; Mayer, K.F.X. #submission submitted to the Protein Sequence Database, August 2000 #accession T51379 ##status preliminary ##molecule_type DNA ##residues 1-66 ##label SAT ##cross-references EMBL:AL391145 ##experimental_source cultivar Columbia; BAC clone F1N13 COMMENT inducible by cold and also by abscisic acid (ABA) and water stress; protein kin1 shows similarity to fish antifreeze protein. GENETICS #gene kin1 #map_position 5 #introns 19/2; 42/2 #note F1N13_100 SUMMARY #length 66 #molecular-weight 6495 #checksum 3455 SEQUENCE 5 10 15 20 25 30 1 M S E T N K N A F Q A G Q T A G K A E E K S N V L L D K A K 31 D A A A G A G A G A Q Q A G K S V S D A A A G G V N F V K D 61 K T G L N K /// ENTRY S53512 #type complete TITLE antifreeze protein RD1 - eelpout (Lycodichthys dearborni) ORGANISM #formal_name Lycodichthys dearborni DATE 15-Jul-1995 #sequence_revision 21-Jul-1995 #text_change 24-Oct-2000 ACCESSIONS S53512 REFERENCE S53512 #authors Wang, X.; DeVries, A.L.; Cheng, C.H.C. #journal Biochim. Biophys. Acta (1995) 1247:163-172 #title Antifreeze peptide heterogeneity in an antarctic eel pout includes an unusually large major variant comprised of two 7 kDa type III AFPs linked in tandem. #cross-references MUID:95210308 #accession S53512 ##status preliminary ##molecule_type protein ##residues 1-64 ##label WAN CLASSIFICATION #superfamily antifreeze protein SP1 KEYWORDS antifreeze SUMMARY #length 64 #molecular-weight 6906 #checksum 9758 SEQUENCE 5 10 15 20 25 30 1 N K A S V V A N Q L I P I N T A L T L I M M K A E V V T P M 31 G I P A E E I P K L V G M Q V N R A V P L G T T L M P D M V 61 K N Y E /// ENTRY S53514 #type complete TITLE antifreeze protein RD3 - eelpout (Lycodichthys dearborni) ORGANISM #formal_name Lycodichthys dearborni DATE 15-Jul-1995 #sequence_revision 21-Jul-1995 #text_change 17-Mar-1999 ACCESSIONS S53514 REFERENCE S53512 #authors Wang, X.; DeVries, A.L.; Cheng, C.H.C. #journal Biochim. Biophys. Acta (1995) 1247:163-172 #title Antifreeze peptide heterogeneity in an antarctic eel pout includes an unusually large major variant comprised of two 7 kDa type III AFPs linked in tandem. #cross-references MUID:95210308 #accession S53514 ##status preliminary ##molecule_type protein ##residues 1-134 ##label WAN SUMMARY #length 134 #molecular-weight 14480 #checksum 921 SEQUENCE 5 10 15 20 25 30 1 N K A S V V A N Q L I P I N T A L T L I M M K A E V V T P M 31 G I P A E E I P N L V G M Q V N R A V P L G T T L M P D M V 61 K N Y E D G T T S P G L K S V V A N Q L I P I N T A L T L V 91 M M K A E E V S P K G I P S E E I S K L V G M Q V N R A V Y 121 L D Q T L M P D M V K N Y E /// ENTRY T14845 #type complete TITLE antifreeze-like protein (af70) - Norway spruce ORGANISM #formal_name Picea abies #common_name Norway spruce DATE 20-Sep-1999 #sequence_revision 20-Sep-1999 #text_change 20-Jun-2000 ACCESSIONS T14845 REFERENCE Z18237 #authors Sabala, I.; Franzen, H.; von Arnold, S. #submission submitted to the EMBL Data Library, April 1996 #description Characteriozation of a spruce gene constitutively expressed in somatic embryos and induced by ABA and low temperature in seedlings. #accession T14845 ##status preliminary; translated from GB/EMBL/DDBJ ##molecule_type mRNA ##residues 1-779 ##label SAB ##cross-references EMBL:D86598 ##experimental_source embryogenic suspension cultures CLASSIFICATION #superfamily subtilisin-like proteinase ag12; subtilisin homology SUMMARY #length 779 #molecular-weight 82832 #checksum 2539 SEQUENCE 5 10 15 20 25 30 1 M M G L K L Y F A L V F L C S L L F G P V I A E D G K V H I 31 V Y M G S L S H N N R E D L V T S H L E V L S S V L E S P R 61 H A K Q S L V R S Y T Y A F N G F A A V L S K E Q A T T L V 91 G K P G V L S V F P D T V L N L H T T H S W D Y L E K D L S 121 M P G F S Y R K P K S S G T D I I L G F L D T G I W P E A A 151 S F S D K G M G P V P S R W K G A C V K G E N F N V S N C N 181 R K I I G A R Y Y S G G E D D D L K K N S K P K S I W P E S 211 R T A R D Y Q G H G T Y T A A T A A G S F V D N A N Y N G L 241 A N G T A R G G S A S S S T R I A M Y R V C G L D Y G C P G 271 V Q I L A A F D D A V K D G V D I V S I S I G V R S S N Q A 301 D F V K D A I A I G A F H A T Q K G I L V V S S A G N E G P 331 D S Q T V V N A A P W I F T V G A T S I D R E F L S N V V L 361 G N G K I I K G K G I T M S N L S H S A V H P L V Y A G S I 391 P D K S S Y P V A A S N C L L D S L D A S K A K G N V V V C 421 I A N D T A A S R Y I M K L A V Q D A G G I G M V V V E D I 451 Q I F E A F D Y G T F P A T A V S K T S A T E I F S Y I K S 481 N R N P V A T I T L T E V V T N Y I P A P V I A S F S S R G 511 P G G L T Q N I L K P D I S A P G V N I I A A W N P P N Q S 541 D E D T V V S E M T P S T F N M M S G T S V A V P H V T G A 571 A A F V K S I N P T W S S S A I R S A L M T T A I V R N N M 601 G K L L T N E S D I P G T P F D F G A G V V N P I G A L Q P 631 G L V Y E T S I D D Y F H F L C N Y G L D S E N I K I I A A 661 N E S Y K C P S G V N A D L I S N M N Y P S I A I S K L G I 691 K N G S T T I S R S V T N F V P E Q A P T Y K V T I D A P P 721 G L N V K V S P E I L H F S K T S K K L S F N V V F T P T N 751 V A T K G Y A F G T L V W S D G K H N V R S P F A V N M V /// ENTRY T44768 #type complete TITLE antifreeze glycopeptide AFGP polyprotein precursor [imported] - Boreogadus saida ORGANISM #formal_name Boreogadus saida DATE 21-Jan-2000 #sequence_revision 21-Jan-2000 #text_change 21-Jul-2000 ACCESSIONS T44768 REFERENCE Z22834 #authors Chen, L.; DeVries, A.L.; Cheng, C.H.C. #journal Proc. Natl. Acad. Sci. U.S.A. (1997) 94:3817-3822 #title Convergent evolution of antifreeze glycopeptides in Antarctic notothenioid fish and Arctic Cod. #cross-references MUID:97268653 #accession T44768 ##status preliminary; translated from GB/EMBL/DDBJ ##molecule_type DNA ##residues 1-507 ##label CHE ##cross-references EMBL:U43200; NID:g2078482; PIDN:AAC60129.1; PID:g2078483 GENETICS #introns 1/3 SUMMARY #length 507 #molecular-weight 44684 #checksum 2297 SEQUENCE 5 10 15 20 25 30 1 M L T G S C L L G P S C T S S P R Y E Q H Q L L V A R P A A 31 A A R A A T P A T A A T P A T A A T P A T A A T A A T E A T 61 A A T A A T P A T A A T P A T A A T A A T T A A T A A T A A 91 T A A T P A R A A R A A T P A T A A T P A T A A T A A T A A 121 T A A T A E T P A R A A T P A T A A T P A T A A T P A T A A 151 T A A T A A T S A T A A T A A R A A T P A T A A T P A T P A 181 T A A R A A R A A T P A T A A T A A T A A T A A T A A T A A 211 T A A T A A T P A R A A R A A T P A T A P T P A T A A T P A 241 T A A T A A T A P T A A T P A R A A R A A T P A T A A T L A 271 T A A T P A T P A T P A T A A T D A T A A T A A T P A R A A 301 T P A T P A T A A T P A T P A T A A T A A T A A T A A T A A 331 T P A R A A R A A T P A T A A T P A T A A T A A T A A T A A 361 T A A T A A T P A R A A R A A T P A T A A T A A T A A T A A 391 T A A T A A T P A R A A R A A T P A T P A T P A T P A T P A 421 T A A T A A T A A T A A T A A T A A T A A T A A T A P T P A 451 R A A R A A T P A T G A T P A T A P T A G T A A T A A T A A 481 T A A T P A R A S T P A T A A T P V T A A T P A A V F /// ENTRY T51008 #type complete TITLE related to antifreeze glycopeptide AFGP polyprotein precursor [imported] - Neurospora crassa ALTERNATE_NAMES protein B7J19.70 ORGANISM #formal_name Neurospora crassa DATE 21-Jul-2000 #sequence_revision 21-Jul-2000 #text_change 21-Jul-2000 ACCESSIONS T51008 REFERENCE Z25286 #authors Schulte, U.; Aign, V.; Hoheisel, J.; Brandt, P.; Fartmann, B.; Holland, R.; Nyakatura, G.; Mewes, H.W.; Mannhaupt, G. #submission submitted to the Protein Sequence Database, July 2000 #accession T51008 ##status preliminary ##molecule_type DNA ##residues 1-286 ##label SCH ##cross-references EMBL:AL389899; GSPDB:GN00116; NCSP:B7J19.70 ##experimental_source BAC clone B7J19; strain OR74A GENETICS #gene NCSP:B7J19.70 #map_position 6 SUMMARY #length 286 #molecular-weight 28689 #checksum 581 SEQUENCE 5 10 15 20 25 30 1 M P P K A V A N G E S A C T L R G Q A L T S S E V K I L F G 31 A L N N L T A P L D I D L Q G A A E T A G L K P N S Y K E M 61 Y R Q F R R K Y E L G K P N A A A A A T A A V V V A S G G D 91 G S N Q P V T T S T G S S S S T A T P K K A P G T A G G S G 121 G G R P R A R P K K M L L T P G V G G G T N Q G V E A T L A 151 T P G T P M G N L N F N D M T P E T P S K K A F G T S N K R 181 S A T E A N P D E T P A K K G P A A R K P R V T A A T A K Q 211 K A V A A A A A Q A E T K V K V E A A T D A G F S F I G D F 241 V G N D V D A A M E G I S Q A A E A I E D T L A A A A A D E 271 G Y I T A T E G G G P D Y G E I ///