LOCUS NZ_ACVX01000071 3365 bp DNA linear CON 10-NOV-2010 DEFINITION Clostridium thermocellum DSM 2360 ctg00012, whole genome shotgun sequence. ACCESSION NZ_ACVX01000071 NZ_ACVX00000000 VERSION NZ_ACVX01000071.1 GI:256006144 KEYWORDS WGS. SOURCE Clostridium thermocellum DSM 2360 ORGANISM Clostridium thermocellum DSM 2360 Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium. COMMENT PREDICTED REFSEQ: This record has not been reviewed and the function is unknown. The reference sequence was derived from ACVX01000071. FEATURES Location/Qualifiers source 1..3365 /organism="Clostridium thermocellum DSM 2360" /mol_type="genomic DNA" /strain="DSM 2360" /isolation_source="contaminant of Clostridium thermocellum strain LQ8" /db_xref="taxon:572545" gene <1..1188 /locus_tag="ClothDRAFT_2928" CDS <1..1188 /locus_tag="ClothDRAFT_2928" /inference="ab initio prediction:Prodigal:1.4" /note="KEGG: hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="ZP_05431067.1" /db_xref="GI:256006145" /translation="IATVVAGWTGGVGVPIVHTLIMMAWAMAESLFDVYLLLKGESIP IFKTRNTWITDIEGLSMTITNEIIDKVKENAKFASERVIDYTENKAEDFLDKAATTIA DYIDSKVDLLVDKAFASIENPFKEKVYSAEDIFNDLETSLNVKVEGELGDIMNQISSE VQTLLLQQIETVENSPIGSYVPDIIQGVDYTDFLEVYKDKNLKEAIEELTAILAEGKE VLGYNVDETSKKVNSMIFNTILEAKKTVKYNIKAGIRGYKDNLVNKFKETFKKTAEKG KEEVNKFIDSIGNTSDSEVMKTNLRGSFLSMKYTDYLRLFLLFTNKDVKLKRIADLIQ VNMRKVSSNNTFKLSECSTYMRVESSISIKYLFATKPFMPKELRTEDGRRIKFDVILY KGY" gene 1220..1783 /locus_tag="ClothDRAFT_2929" CDS 1220..1783 /locus_tag="ClothDRAFT_2929" /inference="ab initio prediction:Prodigal:1.4" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="ZP_05431068.1" /db_xref="GI:256006146" /translation="MNRQKLSILIGIMLCVLLSACGDGERNNQPSGTSGVNTIQSTQK PEDKKEKTNAEKFLEYAIKAADLRNFTKTGDYAGIGITLQDLYQEDIVNPYTGGTSLT VMNRTRSMMKDQHLSRTRLFSVDCVIIDDYMTLLEELDTSEVLYCVNPESKGMVFAFW LMDGVYIYEVDENGQKINEIKHFFEKE" sig_peptide 1220..1282 /locus_tag="ClothDRAFT_2929" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probabilty 0.991) with cleavage site probability 0.492 at residue 21" misc_feature 1241..>1474 /locus_tag="ClothDRAFT_2929" /note="Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ); Region: Spore_YhcN_YlaJ; cl09802" /db_xref="CDD:158704" gene 1834..2802 /locus_tag="ClothDRAFT_2930" CDS 1834..2802 /locus_tag="ClothDRAFT_2930" /inference="protein motif:PFAM:PF07833" /note="PFAM: copper amine oxidase domain protein; KEGG: hypothetical protein" /codon_start=1 /transl_table=11 /product="copper amine oxidase domain protein" /protein_id="ZP_05431069.1" /db_xref="GI:256006147" /db_xref="InterPro:IPR012854" /translation="MKRIARILTLALIVTCLLSLPTLAIELPIRVVVNGTKINFPDAE PFIDENSRTQVPIRFVGEALGANVSWDGNTKKVTITLNGKKVVLQIGNKNYEVNGQQK QMDTVALLKESRTFVPVRFVSEALGATVKWNANIRTVYIDMNGDVAPSPEPTGGAVKY YDGIAFNDVTDVDQYGRIEIEKLKEFLLKLAEQLRFVKENGKYYIECTYPAKPEGYEW NLIIRIYNKDNSYEAYTPTTRVPDCKIPTEGSFKKEATAIKDINSISFFNVTISLDHP KTGSLGRLNIVYSMDKSDIWATFVPKSGTIPSEEYKTFNFNKMFQW" sig_peptide 1834..1908 /locus_tag="ClothDRAFT_2930" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probabilty 0.991) with cleavage site probability 0.800 at residue 25" misc_feature 1978..2256 /locus_tag="ClothDRAFT_2930" /note="Copper amine oxidase N-terminal domain; Region: Cu_amine_oxidN1; pfam07833" /db_xref="CDD:149091" gene 2822..>3365 /locus_tag="ClothDRAFT_2931" CDS 2822..>3365 /locus_tag="ClothDRAFT_2931" /inference="ab initio prediction:Prodigal:1.4" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="ZP_05431070.1" /db_xref="GI:256006148" /translation="MSKRICWILVIMIISSTIICYSNYDGGIVNAEKLNIVEVIIDGI DDEPKSRIIGSCGPFRKAIELWHYSGGYWKYNNLVIRDEGLGKGLVKEEELEKAINEE ITFEYAIDSELYKRLIKEGDIKVVCSTPLIDENTMENKSICDLFYGTPTIEIKNGKIY FSAKPKFHFYNETSYYEIIGD" ORIGIN 1 attgctaccg ttgtagctgg gtggaccggt ggtgtaggtg taccgatagt tcatacatta 61 attatgatgg cttgggcaat ggcggaatct ttgtttgatg tatatttatt gttaaagggt 121 gagagtatac caatatttaa aacgagaaat acgtggataa cggatatcga agggctttcg 181 atgacaatta caaatgaaat aattgataaa gttaaggaaa atgctaaatt tgcttctgaa 241 agagtgattg attatacgga gaacaaagca gaggattttc tggacaaggc ggctacgact 301 atagcggact atattgactc aaaagtggat ttacttgttg ataaggcatt tgctagtatt 361 gaaaatcctt ttaaagagaa agtatattct gcggaagata tttttaatga tttggagaca 421 agtttaaatg ttaaagttga gggagaatta ggagatataa tgaatcagat tagtagtgaa 481 gttcaaactt tgcttcttca gcaaatagaa actgttgaaa acagccctat aggtagttat 541 gtgcctgata ttattcaagg agttgattat acagattttc ttgaagtata taaggataaa 601 aatctgaaag aagctataga agaacttact gcaatacttg cagagggaaa agaggtgctt 661 ggctataatg tagatgaaac aagtaaaaaa gtaaatagta tgatttttaa taccattctg 721 gaagcaaaaa aaacagtgaa gtataatata aaggctggta tcaggggtta taaggataat 781 ttagttaata agtttaagga aacgttcaaa aagactgctg agaagggaaa agaagaggta 841 aataaattta ttgattctat tggcaataca agtgattcag aagtaatgaa aacaaacctt 901 agagggtctt ttctctctat gaagtatact gattatttaa ggttattttt actttttaca 961 aacaaggatg taaagttgaa aaggatagct gatttgatac aagtaaatat gagaaaggtt 1021 tcaagcaata atacttttaa attgtcagaa tgcagtacat atatgcgcgt tgaatcttca 1081 atttcaataa aatatttgtt tgctacaaaa ccttttatgc caaaggaatt aaggaccgag 1141 gatggaagaa ggataaagtt cgatgttatc ctatataagg gatattaaaa taaattttaa 1201 gaaaagggga tgttaaaaaa tgaatagaca aaaattatca atattgatag ggataatgtt 1261 atgtgtatta ttatcagctt gtggagatgg tgaaagaaat aatcaacctt ctggtacgtc 1321 aggggtaaac acaatacaga gtacacaaaa gccagaagac aaaaaagaaa agacaaatgc 1381 agaaaaattt ttagagtatg ctataaaggc cgctgattta agaaatttta caaaaaccgg 1441 cgattatgca ggaattggaa ttacattaca ggatttatat caggaagaca ttgtaaatcc 1501 ttatactgga ggtacttctt taactgtaat gaatagaact agaagtatga tgaaagatca 1561 acatttgtcc agaacaagat tgtttagtgt agactgtgta ataatagatg attatatgac 1621 tctacttgaa gagttagaca catctgaggt actttattgt gtaaatcccg aaagtaaagg 1681 tatggtgttt gcgttttggt taatggatgg tgtgtatata tatgaggttg atgaaaatgg 1741 tcaaaaaata aatgaaatca agcatttctt tgaaaaggaa taagaataaa acaaaacttt 1801 catgtaagta acacatatgg aggggaaatt gaaatgaaaa gaattgcaag aatattaaca 1861 ttggcattaa tagttacatg cttgttatca ttgccaacat tagcaattga gcttccaatt 1921 cgagtagtgg taaatggaac aaagataaat tttccagatg cagagccgtt tattgatgag 1981 aattcaagaa cacaggtgcc tatcagattt gttggagaag ctctgggtgc gaatgtaagt 2041 tgggacggaa atacaaaaaa agtgacaata acgttaaacg gaaaaaaagt agtgcttcaa 2101 atagggaata aaaactatga agtaaacgga caacagaagc aaatggatac agtggcatta 2161 ttaaaagaat cgaggacatt tgtacctgtg aggtttgtga gtgaagcatt gggagcaact 2221 gtaaagtgga atgcaaatat aagaacggtg tatattgaca tgaatggtga tgtagcacct 2281 tctcctgaac cgacaggagg agcagtaaaa tattatgatg gaatagcatt taatgatgtt 2341 accgatgttg accagtatgg aagaatagaa attgagaaat taaaggagtt tttgctcaag 2401 ttagccgaac aattgagatt tgtaaaagaa aacggaaaat attatattga atgcacttat 2461 ccggcgaaac ccgaaggtta tgagtggaac ttaataataa gaatttataa taaagataat 2521 tcatatgaag catatactcc aactactcgt gttcctgact gtaaaatacc tacagaaggg 2581 tcatttaaaa aggaagcaac agctattaag gatataaata gcattagttt ctttaatgta 2641 actatttcat tagatcatcc taaaacaggt agtttaggta gattaaatat agtttattct 2701 atggataaat cagatatttg ggcaactttt gttcctaagt caggaacgat accttcagaa 2761 gaatataaaa cgtttaattt taacaaaatg ttccaatggt aaacagaatt gggggtaaag 2821 aatgagcaaa agaatttgtt ggatattagt aattatgata atatcctcaa ctattatttg 2881 ttattcaaat tacgatggtg ggatagttaa tgcagaaaaa ttaaatattg ttgaagtgat 2941 aatagatggg atagatgatg aaccaaaaag taggattata ggttcatgtg gtccctttag 3001 gaaggcgatt gaattatggc actatagtgg aggttactgg aaatataata atttagtgat 3061 aagagatgaa ggtttgggta aaggtcttgt taaagaagaa gaacttgaaa aagcaattaa 3121 tgaagagatt acgtttgaat atgctattga ctcggaactt tataaaaggt taataaaaga 3181 gggagatata aaggtagtat gctcaacacc tttaatagat gaaaatacta tggaaaataa 3241 gtcgatttgt gatttatttt atggtacccc aacaatagaa attaagaatg gtaaaatata 3301 tttttctgcg aaacccaaat ttcattttta taatgagaca tcttattatg agataatagg 3361 agatc //