#!/bin/sh # Wrapper for clustalx # Use this for a more diverse server cluster # Platform-specific setup commands # GDE requires the obsolete xview libraries, which are probably available by default on # Solaris systems in /usr/openwin, but we put this here just to make sure. # Linux systems almost never have /usr/openwin, so we need to supply that in lib-linux-intel/openwin/lib. # We put /usr/dt/lib in in case someone is using CDE, and the other libraries are there just as additional # fallbacks. For example, if /usr/openwin/lib wasn't on your Solaris system, you could install it in # $BIRCH/local/lib-solaris-sparc. BIRCHLIBS="" case $BIRCH_PLATFORM in "solaris-sparc") BIRCHLIBS="/usr/openwin/lib:/usr/dt/lib:$BIRCH/lib-solaris-sparc:$BIRCH/local/lib-solaris-sparc" ;; "solaris-amd64") BIRCHLIBS="/usr/openwin/lib:/usr/lib:/usr/lib/X11:/usr/dt/lib:$BIRCH/lib-solaris-amd64:$BIRCH/local/lib-solaris-amd64" ;; "linux-intel") BIRCHLIBS=$BIRCH/local/lib-linux-intel:$BIRCH/lib-linux-intel:$BIRCH/lib-linux-intel/openwin/lib:$BIRCH/local/lib-linux-intel/clustal: # GDEFONTS="$BIRCH/lib-linux-intel/gde.fonts/100dpi" # GDEFONTS=$GDEFONTS','$BIRCH/lib-linux-intel/gde.fonts/misc # GDEFONTS=$GDEFONTS','$BIRCH/lib-linux-intel/gde.fonts/75dpi ;; "linux-x86_64") BIRCHLIBS=$BIRCH/local/lib-linux-x86_64:$BIRCH/lib-linux-x86_64:$BIRCH/lib-linux-x86_64/openwin/lib:$BIRCH/lib-linux-x86_64/fc4libs: # GDEFONTS="$BIRCH/lib-linux-x86_64/gde.fonts/100dpi" # GDEFONTS=$GDEFONTS','$BIRCH/lib-linux-x86_64/gde.fonts/misc # GDEFONTS=$GDEFONTS','$BIRCH/lib-linux-x86_64/gde.fonts/75dpi ;; "AIX") ;; "HP") ;; *) ;; esac export BIRCHLIBS if [ ! -z "$LD_LIBRARY_PATH" ] then LD_LIBRARY_PATH="$BIRCHLIBS":"$LD_LIBRARY_PATH" export LD_LIBRARY_PATH else LD_LIBRARY_PATH="$BIRCHLIBS" export LD_LIBRARY_PATH fi # ------------------------ FONTS ------------------------------ # See $BIRCH/local/lib-linux-intel/README.fonts #if [ ! -z "$GDEFONTS" ] # then # echo GDEFONTS "$GDEFONTS" # FOR TESTING PURPOSES ONLY: # Remove all fonts from fontpath, and set ONLY the fonts we think we need #xset fp- /home/psgendb/.gnome2/share/cursor-fonts,tcp/localhost:7100,/home/psgendb/.gnome2/share/fonts # Set $GDEFONTS to fontpath #xset fp= $GDEFONTS # Append $GDEFONTS to fontpath. Probably the safest choice. # xset +fp $GDEFONTS # Prepend $GDEFONTS to fontpath #xset fp+ $GDEFONTS # Show current X settings, including fontpath #xset -q #fi clustalx.bin $*