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| Name | Last modified | Size | Description |
|---|---|---|---|---|
| Parent Directory | - | ||
| lastal.cc | 2023-10-09 17:54 | 59K | |
| LastalArguments.cc | 2023-10-09 17:54 | 25K | |
| AlignmentWrite.cc | 2023-10-09 17:54 | 22K | |
| last-pair-probs.cc | 2023-10-09 17:54 | 20K | |
| SubsetSuffixArraySor..> | 2023-10-09 17:54 | 20K | |
| Centroid.cc | 2023-10-09 17:54 | 18K | |
| lastdb.cc | 2023-10-09 17:54 | 18K | |
| makefile | 2023-10-09 17:54 | 17K | |
| tantan.cc | 2023-10-09 17:54 | 17K | |
| SubsetSuffixArraySea..> | 2023-10-09 17:54 | 16K | |
| Alignment.cc | 2023-10-09 17:54 | 15K | |
| mcf_frameshift_xdrop..> | 2023-10-09 17:54 | 15K | |
| GappedXdropAligner.hh | 2023-10-09 17:54 | 14K | |
| ScoreMatrix.cc | 2023-10-09 17:54 | 13K | |
| mcf_simd.hh | 2023-10-09 17:54 | 13K | |
| ScoreMatrixData.hh | 2023-11-10 10:04 | 12K | |
| LastEvaluer.cc | 2023-10-09 17:54 | 12K | |
| SubsetSuffixArray.hh | 2023-10-09 17:54 | 11K | |
| CyclicSubsetSeedData.hh | 2023-11-10 10:04 | 11K | |
| GappedXdropAligner3f..> | 2023-10-09 17:54 | 10K | |
| SubsetSuffixArray.cc | 2023-10-09 17:54 | 9.5K | |
| GappedXdropAligner.cc | 2023-10-09 17:54 | 8.8K | |
| GeneticCodeData.hh | 2023-11-10 10:05 | 8.5K | |
| GappedXdropAlignerDn..> | 2023-10-09 17:54 | 8.3K | |
| MultiSequence.hh | 2023-10-09 17:54 | 8.3K | |
| CyclicSubsetSeed.hh | 2023-10-09 17:54 | 7.4K | |
| Alignment.hh | 2023-10-09 17:54 | 6.9K | |
| LastdbArguments.cc | 2023-10-09 17:54 | 6.8K | |
| GappedXdropAlignerFr..> | 2023-10-09 17:54 | 6.5K | |
| LambdaCalculator.cc | 2023-10-09 17:54 | 6.3K | |
| GeneticCode.cc | 2023-10-09 17:54 | 6.3K | |
| TwoQualityScoreMatri..> | 2023-10-09 17:54 | 6.0K | |
| CyclicSubsetSeed.cc | 2023-10-09 17:54 | 6.0K | |
| Centroid.hh | 2023-10-09 17:54 | 5.9K | |
| MultiSequenceQual.cc | 2023-10-09 17:54 | 5.8K | |
| LastEvaluerData.hh | 2023-10-09 17:54 | 5.8K | |
| GreedyXdropAligner.cc | 2023-10-09 17:54 | 5.5K | |
| GappedXdropAlignerPs..> | 2023-10-09 17:54 | 5.4K | |
| GappedXdropAligner2q..> | 2023-10-09 17:54 | 5.3K | |
| GappedXdropAligner3f..> | 2023-10-09 17:54 | 5.0K | |
| MultiSequence.cc | 2023-10-09 17:54 | 4.9K | |
| tantan.hh | 2023-10-09 17:54 | 4.6K | |
| last-pair-probs-main.cc | 2023-10-09 17:54 | 4.4K | |
| LastEvaluer.hh | 2023-10-09 17:54 | 4.3K | |
| GappedXdropAlignerIn..> | 2023-10-09 17:54 | 4.3K | |
| gaplessXdrop.hh | 2023-10-09 17:54 | 4.3K | |
| mcf_gap_costs.cc | 2023-10-09 17:54 | 4.2K | |
| SegmentPairPot.cc | 2023-10-09 17:54 | 4.2K | |
| mcf_frameshift_xdrop..> | 2023-10-09 17:54 | 4.1K | |
| LastalArguments.hh | 2023-10-09 17:54 | 3.9K | |
| OneQualityScoreMatri..> | 2023-10-09 17:54 | 3.9K | |
| gaplessTwoQualityXdr..> | 2023-10-09 17:54 | 3.8K | |
| mcf_substitution_mat..> | 2023-10-09 17:54 | 3.8K | |
| OneQualityScoreMatri..> | 2023-10-09 17:54 | 3.5K | |
| Alphabet.cc | 2023-10-09 17:54 | 3.5K | |
| QualityPssmMaker.cc | 2023-10-09 17:54 | 3.4K | |
| mcf_packed_array.hh | 2023-10-09 17:54 | 3.4K | |
| GeneticCode.hh | 2023-10-09 17:54 | 3.4K | |
| TwoQualityScoreMatri..> | 2023-10-09 17:54 | 3.3K | |
| Alphabet.hh | 2023-10-09 17:54 | 3.0K | |
| gaplessPssmXdrop.hh | 2023-10-09 17:54 | 3.0K | |
| dna_words_finder.hh | 2023-10-09 17:54 | 3.0K | |
| SegmentPairPot.hh | 2023-10-09 17:54 | 2.8K | |
| last.hh | 2023-10-09 17:54 | 2.8K | |
| last-merge-batches.c | 2023-10-09 17:54 | 2.6K | |
| mcf_substitution_mat..> | 2023-10-09 17:54 | 2.6K | |
| QualityPssmMaker.hh | 2023-10-09 17:54 | 2.5K | |
| ScoreMatrix.hh | 2023-10-09 17:54 | 2.5K | |
| LambdaCalculator.hh | 2023-10-09 17:54 | 2.4K | |
| mcf_gap_costs.hh | 2023-10-09 17:54 | 2.3K | |
| Mmap.hh | 2023-10-09 17:54 | 2.3K | |
| qualityScoreUtil.hh | 2023-10-09 17:54 | 2.3K | |
| GreedyXdropAligner.hh | 2023-10-09 17:54 | 2.2K | |
| AlignmentPot.hh | 2023-10-09 17:54 | 2.1K | |
| mcf_alignment_path_a..> | 2023-10-09 17:54 | 1.9K | |
| fileMap.cc | 2023-10-09 17:54 | 1.8K | |
| DiagonalTable.hh | 2023-10-09 17:54 | 1.7K | |
| LastdbArguments.hh | 2023-10-09 17:54 | 1.6K | |
| last-pair-probs.hh | 2023-10-09 17:54 | 1.6K | |
| mcf_alignment_path_a..> | 2023-10-09 17:54 | 1.6K | |
| mcf_zstream.hh | 2023-10-09 17:54 | 1.6K | |
| SequenceFormat.hh | 2023-10-09 17:54 | 1.6K | |
| dna_words_finder.cc | 2023-10-09 17:54 | 1.6K | |
| stringify.hh | 2023-10-09 17:54 | 1.5K | |
| TantanMasker.cc | 2023-10-09 17:54 | 1.4K | |
| TantanMasker.hh | 2023-10-09 17:54 | 1.4K | |
| SegmentPair.hh | 2023-10-09 17:54 | 1.3K | |
| mcf_big_seq.hh | 2023-10-09 17:54 | 1.3K | |
| SubsetMinimizerFinde..> | 2023-10-09 17:54 | 1.2K | |
| SubsetMinimizerFinde..> | 2023-10-09 17:54 | 1.2K | |
| mcf_reverse_queue.hh | 2023-10-09 17:54 | 1.1K | |
| io.hh | 2023-10-09 17:54 | 1.0K | |
| zio.hh | 2023-10-09 17:54 | 970 | |
| ScoreMatrixRow.hh | 2023-10-09 17:54 | 919 | |
| cbrc_linalg.cc | 2023-10-09 17:54 | 827 | |
| VectorOrMmap.hh | 2023-10-09 17:54 | 820 | |
| threadUtil.hh | 2023-10-09 17:54 | 778 | |
| AlignmentPot.cc | 2023-10-09 17:54 | 703 | |
| cbrc_linalg.hh | 2023-10-09 17:54 | 643 | |
| SegmentPair.cc | 2023-10-09 17:54 | 633 | |
| fileMap.hh | 2023-10-09 17:54 | 613 | |
| mcf_contiguous_queue.hh | 2023-10-09 17:54 | 590 | |
| getoptUtil.hh | 2023-10-09 17:54 | 295 | |
| version.hh | 2023-11-10 10:04 | 7 | |
| split/ | 2023-11-13 13:32 | - | |
| alp/ | 2023-11-13 13:32 | - | |