#------------------------- BACHREST 2/ 8/05  --------------------------
item:BACHREST - Batch Rest. Site Search

# The directory fsapdoc must also be available in the $GDE_HELP_DIR,
# containing the file rest.asc from the FSAP package. Again, this
# directory can be implemented as a symbolic link.

#itemmethod: readseq -f1 -oin1.ig in1; (bachrest.csh in1.ig $DAT/REBASE/type2.lst in1.tmp $SOURCE $PROTO $MINSITE $MAXSITE | bachrest; ($GDE_TEXTEDIT in1.tmp; $RM_CMD in1*)& )&
itemmethod: (bachrest.csh in1 $DAT/REBASE/type2.lst in1.tmp $SOURCE $PROTO $MINSITE $MAXSITE; ($GDE_TEXTEDIT in1.tmp; $RM_CMD in1*)& )&
itemhelp:doc/fsap/rest.txt

arg:SOURCE
argtype:chooser
arglabel:Source
argchoice:Commercial:C
argchoice:All:A
argvalue:1

arg:PROTO
argtype:chooser
arglabel:Prototypes only?
argchoice:Prototypes:P
argchoice:All:A
argvalue:0

arg:MINSITE
argtype:slider
arglabel:Min. Recognition Seq. Length
argmin:4
argmax:21
argvalue:6

arg:MAXSITE
argtype:slider
arglabel:Max. Recognition Seq. Length
argmin:4
argmax:21
argvalue:21

in:in1
informat:genbank
insave: