Mesquite
Studies of Tree Topology
Version 3.70
August 2021
Mesquite Website Home
Introduction
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Overview of Mesquite ˇ
What Mesquite Does
List of Features
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Getting Started ˇ
Download and Installation
Additional Packages
Beginning Mesquite
Example Files
Basic Operations ˇ
Files
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Modules
Simplifying Mesquite
Taxa, Trees, Characters ˇ
Characters & Matrices
Taxa
Trees
Analyses ˇ
Character Evolution
Sequence Alignment
Molecular Data
Diversification
Gene Trees
Simulations & Randomizations
Continuous Characters
Studies of Tree Topology
Workflows ˇ
Managing Molecular Data
Managing Continuous Data
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Getting Help ˇ
Learning Mesquite
Simplifying Mesquite
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Technical Details ˇ
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History ˇ
History of Mesquite
Why Mesquite?
New Features & Bug List
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Publishing Results ˇ
Documenting your work
Citing Mesquite
Publishing results
Acknowledgments
Studies of Tree Topology
Study 1:
Testing monophyly of a group of beetles
Study 2:
Are strepsipterans related to flies? Exploring long branch attraction