blast_formatter -archive AOPRP.pro.blastp.asn1 -outfmt '7 sseqid pident length mismatch gapopen qstart qend sstart send evalue bitscore' -out test.tsv # Create a report in plain text dbsout2.py --infile AOPRP.pro.blastp.asn1 --destination textfile --outfmt 0 --outfile AOPRP.pro.blastp.txt # Create a report in text editor dbsout2.py --infile AOPRP.pro.blastp.asn1 --destination textedit --outfmt 0 # Write a report in html dbsout2.py --infile AOPRP.pro.blastp.asn1 --destination htmlfile --outfmt 0 --outfile AOPRP.pro.blastp.html # Open a report in web browser dbsout2.py --infile AOPRP.pro.blastp.asn1 --destination browser --outfmt 0 # Open a output in BioLegato dbsout2.py --infile AOPRP.pro.blastp.asn1 --destination blpfetch --outfmt 7 dbsout2.py --infile AOPRP.pro.blastp.asn1 --destination blpfetch --outfmt 7,sacc,pident,length,mismatch,gapopen,qstart,qend,sstart,send,evalue,bitscore dbsout2.py --infile AOPRP.pro.blastp.asn1 --destination tsvfile --outfmt 7,sacc,pident,length,mismatch,gapopen,qstart,qend,sstart,send,evalue,bitscore --outfile AOPRP.pro.blastp.tsv tblastn -remote -query AOPRP.pro.fsa -db patnt -outfmt 7 -out AOPRP.pro.tblastn.tsv # Write a report in html blblastout.py --archive AOPRP.pro.blastp.asn1 --destination textedit --outfmt 18 --outfile A0PRP.pro.blastp.test blblastout.py --archive AOPRP.pro.blastp.asn1 --destination browser --outfmt 18 --outfile A0PRP.pro.blastp.html blblastout.py --archive AOPRP.pro.blastp.asn1 --destination blpfetch --outfmt 7,sacc,pident,length,mismatch,gapopen,qstart,qend,sstart,send,evalue,bitscore --outfile A0PRP.pro.blastp.tsv blblastout.py --rid AOPRP.pro.tblastn.tsv --delete --destination textedit --outfmt 18 --outfile test.orgrep