{deneb:/home/psgendb/java/blentrez/src/temp}$birch/java/axis2/bin/wsdl2java.sh -uri http://www.ncbi.nlm.nih .gov/entrez/eutils/soap/v2.0/efetch_pmc.wsdl Using AXIS2_HOME: /home/psgendb/java/axis2-1.4 Using JAVA_HOME: /usr/local/java Retrieving document at 'http://www.ncbi.nlm.nih.gov/entrez/eutils/soap/v2.0/efetch_pmc.wsdl'. Retrieving schema at 'efetch_db_pmc.xsd', relative to 'http://www.ncbi.nlm.nih.gov/entrez/eutils/soap/v2.0/ efetch_pmc.wsdl'. Retrieving schema at 'efetch_pmc.xsd', relative to 'http://www.ncbi.nlm.nih.gov/entrez/eutils/soap/v2.0/efe tch_db_pmc.xsd'. Retrieving schema at 'xml.xsd', relative to 'http://www.ncbi.nlm.nih.gov/entrez/eutils/soap/v2.0/efetch_pmc .xsd'. Retrieving schema at 'xlink.xsd', relative to 'http://www.ncbi.nlm.nih.gov/entrez/eutils/soap/v2.0/efetch_p mc.xsd'. Retrieving schema at 'ncbi-mathml2/mathml2.xsd', relative to 'http://www.ncbi.nlm.nih.gov/entrez/eutils/soa p/v2.0/efetch_pmc.xsd'. Retrieving schema at 'common/math.xsd', relative to 'http://www.ncbi.nlm.nih.gov/entrez/eutils/soap/v2.0/nc bi-mathml2/mathml2.xsd'. Retrieving schema at 'common/common-attribs.xsd', relative to 'http://www.ncbi.nlm.nih.gov/entrez/eutils/so ap/v2.0/ncbi-mathml2/mathml2.xsd'. Retrieving schema at '../../xlink.xsd', relative to 'http://www.ncbi.nlm.nih.gov/entrez/eutils/soap/v2.0/nc bi-mathml2/common/common-attribs.xsd'. Retrieving schema at 'presentation/common-types.xsd', relative to 'http://www.ncbi.nlm.nih.gov/entrez/eutil s/soap/v2.0/ncbi-mathml2/mathml2.xsd'. Retrieving schema at 'presentation/common-attribs.xsd', relative to 'http://www.ncbi.nlm.nih.gov/entrez/eut ils/soap/v2.0/ncbi-mathml2/mathml2.xsd'. Retrieving schema at 'presentation/characters.xsd', relative to 'http://www.ncbi.nlm.nih.gov/entrez/eutils/ soap/v2.0/ncbi-mathml2/mathml2.xsd'. Retrieving schema at 'presentation/tokens.xsd', relative to 'http://www.ncbi.nlm.nih.gov/entrez/eutils/soap /v2.0/ncbi-mathml2/mathml2.xsd'. Retrieving schema at 'presentation/scripts.xsd', relative to 'http://www.ncbi.nlm.nih.gov/entrez/eutils/soa p/v2.0/ncbi-mathml2/mathml2.xsd'. Retrieving schema at 'presentation/space.xsd', relative to 'http://www.ncbi.nlm.nih.gov/entrez/eutils/soap/ v2.0/ncbi-mathml2/mathml2.xsd'. Retrieving schema at 'presentation/layout.xsd', relative to 'http://www.ncbi.nlm.nih.gov/entrez/eutils/soap /v2.0/ncbi-mathml2/mathml2.xsd'. Retrieving schema at 'presentation/table.xsd', relative to 'http://www.ncbi.nlm.nih.gov/entrez/eutils/soap/ v2.0/ncbi-mathml2/mathml2.xsd'. Retrieving schema at 'presentation/style.xsd', relative to 'http://www.ncbi.nlm.nih.gov/entrez/eutils/soap/ v2.0/ncbi-mathml2/mathml2.xsd'. Retrieving schema at 'presentation/error.xsd', relative to 'http://www.ncbi.nlm.nih.gov/entrez/eutils/soap/ v2.0/ncbi-mathml2/mathml2.xsd'. Retrieving schema at 'presentation/action.xsd', relative to 'http://www.ncbi.nlm.nih.gov/entrez/eutils/soap /v2.0/ncbi-mathml2/mathml2.xsd'. Retrieving schema at 'content/common-attrib.xsd', relative to 'http://www.ncbi.nlm.nih.gov/entrez/eutils/so ap/v2.0/ncbi-mathml2/mathml2.xsd'. Retrieving schema at 'content/tokens.xsd', relative to 'http://www.ncbi.nlm.nih.gov/entrez/eutils/soap/v2.0 /ncbi-mathml2/mathml2.xsd'. Retrieving schema at 'content/arith.xsd', relative to 'http://www.ncbi.nlm.nih.gov/entrez/eutils/soap/v2.0/ ncbi-mathml2/mathml2.xsd'. Retrieving schema at 'content/functions.xsd', relative to 'http://www.ncbi.nlm.nih.gov/entrez/eutils/soap/v 2.0/ncbi-mathml2/mathml2.xsd'. Retrieving schema at 'content/logic.xsd', relative to 'http://www.ncbi.nlm.nih.gov/entrez/eutils/soap/v2.0/ ncbi-mathml2/mathml2.xsd'. Retrieving schema at 'content/constructs.xsd', relative to 'http://www.ncbi.nlm.nih.gov/entrez/eutils/soap/ v2.0/ncbi-mathml2/mathml2.xsd'. Retrieving schema at 'content/constants.xsd', relative to 'http://www.ncbi.nlm.nih.gov/entrez/eutils/soap/v 2.0/ncbi-mathml2/mathml2.xsd'. Retrieving schema at 'content/elementary-functions.xsd', relative to 'http://www.ncbi.nlm.nih.gov/entrez/eu tils/soap/v2.0/ncbi-mathml2/mathml2.xsd'. Retrieving schema at 'content/relations.xsd', relative to 'http://www.ncbi.nlm.nih.gov/entrez/eutils/soap/v 2.0/ncbi-mathml2/mathml2.xsd'. Retrieving schema at 'content/semantics.xsd', relative to 'http://www.ncbi.nlm.nih.gov/entrez/eutils/soap/v 2.0/ncbi-mathml2/mathml2.xsd'. Retrieving schema at 'content/sets.xsd', relative to 'http://www.ncbi.nlm.nih.gov/entrez/eutils/soap/v2.0/n cbi-mathml2/mathml2.xsd'. Retrieving schema at 'content/linear-algebra.xsd', relative to 'http://www.ncbi.nlm.nih.gov/entrez/eutils/s oap/v2.0/ncbi-mathml2/mathml2.xsd'. Retrieving schema at 'content/calculus.xsd', relative to 'http://www.ncbi.nlm.nih.gov/entrez/eutils/soap/v2 .0/ncbi-mathml2/mathml2.xsd'. Retrieving schema at 'content/vector-calculus.xsd', relative to 'http://www.ncbi.nlm.nih.gov/entrez/eutils/ soap/v2.0/ncbi-mathml2/mathml2.xsd'. Retrieving schema at 'content/statistics.xsd', relative to 'http://www.ncbi.nlm.nih.gov/entrez/eutils/soap/ v2.0/ncbi-mathml2/mathml2.xsd'. Exception in thread "main" org.apache.axis2.wsdl.codegen.CodeGenerationException: java.lang.RuntimeExceptio n: java.lang.reflect.InvocationTargetException at org.apache.axis2.wsdl.codegen.CodeGenerationEngine.generate(CodeGenerationEngine.java:271) at org.apache.axis2.wsdl.WSDL2Code.main(WSDL2Code.java:35) at org.apache.axis2.wsdl.WSDL2Java.main(WSDL2Java.java:24) Caused by: java.lang.RuntimeException: java.lang.reflect.InvocationTargetException at org.apache.axis2.wsdl.codegen.extension.SimpleDBExtension.engage(SimpleDBExtension.java:53) at org.apache.axis2.wsdl.codegen.CodeGenerationEngine.generate(CodeGenerationEngine.java:224) ... 2 more Caused by: java.lang.reflect.InvocationTargetException at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) at java.lang.reflect.Method.invoke(Method.java:585) at org.apache.axis2.wsdl.codegen.extension.SimpleDBExtension.engage(SimpleDBExtension.java:50) ... 3 more Caused by: org.apache.axis2.schema.SchemaCompilationException: Can not find the group with the qname{http:/ /www.w3.org/1998/Math/MathML}Presentation-token.class from the parent schema http://www.w3.org/1998/Math/Ma thML at org.apache.axis2.schema.SchemaCompiler.process(SchemaCompiler.java:2067) at org.apache.axis2.schema.SchemaCompiler.processGroup(SchemaCompiler.java:2337) at org.apache.axis2.schema.SchemaCompiler.process(SchemaCompiler.java:2073) at org.apache.axis2.schema.SchemaCompiler.processGroup(SchemaCompiler.java:2337) at org.apache.axis2.schema.SchemaCompiler.processParticle(SchemaCompiler.java:1928) at org.apache.axis2.schema.SchemaCompiler.processComplexType(SchemaCompiler.java:1081) at org.apache.axis2.schema.SchemaCompiler.processNamedComplexSchemaType(SchemaCompiler.java:1017) at org.apache.axis2.schema.SchemaCompiler.processSchema(SchemaCompiler.java:931) at org.apache.axis2.schema.SchemaCompiler.processElement(SchemaCompiler.java:592) at org.apache.axis2.schema.SchemaCompiler.processElement(SchemaCompiler.java:563) at org.apache.axis2.schema.SchemaCompiler.compile(SchemaCompiler.java:370) at org.apache.axis2.schema.SchemaCompiler.compile(SchemaCompiler.java:356) at org.apache.axis2.schema.SchemaCompiler.compile(SchemaCompiler.java:352) at org.apache.axis2.schema.SchemaCompiler.compile(SchemaCompiler.java:356) at org.apache.axis2.schema.SchemaCompiler.compile(SchemaCompiler.java:352) at org.apache.axis2.schema.SchemaCompiler.compile(SchemaCompiler.java:280) at org.apache.axis2.schema.ExtensionUtility.invoke(ExtensionUtility.java:103) ... 8 more {deneb:/home/psgendb/java/blentrez/src/temp}