FASTA searches a protein or DNA sequence data bank version 36.3.8h Aug, 2019 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: PEADRRB.dna.fsa 1>>>PEADRRB_1 - 528 nt Library: @/home/psgendb/BIRCHDEV/dat/fasta/refseqgene.nam 638075072 residues in 6849 sequences
Statistics: Altschul/Gish params: n0: 528 Lambda: 0.192 K: 0.177 H: 0.360 statistics sampled from 814 (854) to 814 sequences Algorithm: FASTA (3.8 Nov 2011) [optimized] Parameters: +5/-4 matrix (5:-4), open/ext: -12/-4 ktup: 6, E-join: 0.25 (0.19), E-opt: 0.05 (0.0494), width: 16 Scan time: 53.690
The best scores are: opt bits E(8960) ref|NG_047105.1| Homo sapiens slit guida (375637) [f] 159 46.7 0.003 ref|NG_029466.2| Homo sapiens F-box and (223330) [r] 152 44.7 0.012 ref|NG_008317.2| Homo sapiens fibroblast (687920) [r] 148 43.6 0.025 ref|NG_008111.1| Homo sapiens gamma-gluta (52255) [f] 147 43.3 0.03 ref|NG_015852.2| Homo sapiens MAGE family (10851) [f] 147 43.3 0.03 ref|NG_034004.1| Homo sapiens olfactory r (7939) [f] 147 43.3 0.03 ref|NG_053148.1| Homo sapiens calmodulin (991383) [r] 145 42.8 0.044 ref|NG_031854.2| Homo sapiens glutamate (451676) [f] 143 42.2 0.065 ref|NG_029658.2| Homo sapiens BTB domain (69998) [f] 141 41.7 0.096 ref|NG_033050.2| Homo sapiens STON1-GTF2 (253593) [r] 140 41.4 0.12 ref|NG_008193.2| Homo sapiens luteinizin (75968) [f] 140 41.4 0.12 ref|NG_042811.1| Homo sapiens protein kin (185480) [r] 138 40.9 0.17 ref|NG_053184.1| Homo sapiens teashirt z (530022) [f] 138 40.9 0.17 ref|NG_012107.1| Homo sapiens opioid bind (1124529) [r] 138 40.8 0.17 ref|NG_042824.1| Homo sapiens dynein regu (61800) [r] 138 40.8 0.17 ref|NG_030049.2| Homo sapiens checkpoint (58120) [f] 138 40.8 0.17 ref|NG_008999.1| Homo sapiens CDK5 regula (198291) [r] 138 40.8 0.17 ref|NG_016173.1| Homo sapiens ATXN8 oppos (39541) [r] 138 40.8 0.17 ref|NG_042806.1| Homo sapiens STT3 oligos (36965) [f] 138 40.8 0.17 ref|NG_013228.2| Homo sapiens chondrosarc (13251) [f] 138 40.8 0.17 ref|NG_051659.1| Homo sapiens SLIT-ROBO (310111) [r] 138 40.8 0.17 ref|NG_042151.1| Homo sapiens olfactory r (8097) [r] 136 40.3 0.25 ref|NG_008807.2| Homo sapiens dihydropyri (850317) [f] 135 40.0 0.3 ref|NG_021308.2| Homo sapiens PDS5 cohes (198594) [r] 135 40.0 0.3 ref|NG_031854.2| Homo sapiens glutamate (451676) [r] 134 39.7 0.37 ref|NG_007491.3| Homo sapiens forkhead b (614463) [r] 134 39.7 0.37 ref|NG_030585.1| Homo sapiens insulin lik (65734) [r] 134 39.7 0.37 ref|NG_054905.1| Homo sapiens mono-ADP r (2064698) [r] 133 39.5 0.44 ref|NG_011445.2| Homo sapiens FER tyrosin (456020) [r] 133 39.5 0.44 ref|NG_033913.1| Homo sapiens fibronectin (20675) [f] 133 39.5 0.45 ref|NG_053007.1| Homo sapiens inorganic (111994) [r] 132 39.2 0.54 ref|NG_008979.1| Homo sapiens WD repeat d (45331) [f] 131 38.9 0.65 ref|NG_047182.1| Homo sapiens solute car (133663) [r] 130 38.6 0.79 ref|NG_013232.2| Homo sapiens fatty acid (209520) [r] 130 38.6 0.79 ref|NG_021169.1| Homo sapiens NME/NM23 nu (15531) [r] 130 38.6 0.8 ref|NG_041938.1| Homo sapiens potassium v (474341) [r] 129 38.4 0.95 ref|NG_047156.1| Homo sapiens contactin (1344910) [r] 129 38.4 0.95 ref|NG_051313.1| Homo sapiens myelin tra (549276) [r] 129 38.4 0.95 ref|NG_016991.1| Homo sapiens solute carr (233442) [r] 129 38.4 0.95 ref|NG_032814.2| Homo sapiens arylsulfat (199912) [f] 129 38.4 0.95 ref|NG_042061.1| Homo sapiens thioredoxin (68069) [f] 129 38.4 0.96 ref|NG_051648.1| Homo sapiens chromosome (57779) [r] 129 38.4 0.96 ref|NG_013023.1| Homo sapiens multiple in (55946) [r] 129 38.4 0.96 ref|NG_008448.1| Homo sapiens peroxisomal (36412) [f] 129 38.4 0.96 ref|NG_029017.2| Homo sapiens ATPase fami (185403) [r] 129 38.4 0.96 ref|NG_023250.3| Homo sapiens histone de (922468) [r] 129 38.3 0.96 ref|NG_011718.1| Homo sapiens alcohol deh (23269) [f] 129 38.3 0.96 ref|NG_028255.1| Homo sapiens thymidylate (22896) [r] 129 38.3 0.96 ref|NG_030033.1| Homo sapiens phosphodies (321863) [f] 129 38.3 0.96 ref|NG_033986.1| Homo sapiens ectonucleot (18829) [r] 129 38.3 0.96 ref|NG_012806.1| Homo sapiens trophinin ( (17616) [f] 129 38.3 0.96 ref|NG_029728.1| Homo sapiens protein kin (167437) [r] 129 38.3 0.96 ref|NG_046978.1| Homo sapiens Charcot-Le (13777) [r] 129 38.3 0.96 ref|NG_053016.1| Homo sapiens LRR bindin (131192) [r] 128 38.1 1.2 ref|NG_042180.1| Homo sapiens leucine ric (1132730) [f] 127 37.8 1.4 ref|NG_030342.1| Homo sapiens collectin s (188375) [r] 127 37.8 1.4 ref|NG_033954.1| Homo sapiens maltase-glu (117869) [f] 127 37.8 1.4 ref|NG_047115.1| Homo sapiens ATP bindin (105077) [f] 127 37.8 1.4 ref|NG_023234.1| Homo sapiens CD82 molecu (61199) [r] 127 37.8 1.4 ref|NG_054759.1| Homo sapiens butyrophil (22541) [f] 127 37.8 1.4 ref|NG_034038.1| Homo sapiens leukocyte i (21564) [r] 127 37.8 1.4 ref|NG_013341.2| Homo sapiens DCC netrin (1202732) [r] 126 37.5 1.7 ref|NG_032983.1| Homo sapiens CDKN1A inte (45319) [f] 126 37.5 1.7
>>ref|NG_047105.1| Homo sapiens slit guida (375637 nt)
initn: 119 init1: 119 opt: 159 Z-score: 161.2 bits: 46.7 E(8960): 0.003
banded Smith-Waterman score: 159; 65.6% identity (65.6% similar) in 90 nt overlap (199-284:320236-320325)
170 180 190 200 210 220
PEADRR AAATTGGCACCTCAATCCCACTTTGGTAACATAATAGTTTTTGATGA----CCCTATCAC
:::::: :::: :::: : :: ::
ref|NG GGATGAGAGACACATATAGATATGTGACCAATAATAATTTTATATGAAATTTACCATTAC
320210 320220 320230 320240 320250 320260
230 240 250 260 270 280
PEADRR ATTAAGCCATAGCCTTTCTTCAAAACAAGTTGGAAGAGCACAAGGGTTTTATATTTATGA
:::::: :::: : :: ::: :: ::::::::: :: :::::::: :::
ref|NG ATTAAGGCATACAAGTAATTAAAAGTAAACTGGAAGAGCGTCAGTTGCTTATATTTTTGA
320270 320280 320290 320300 320310 320320
290 300 310 320 330 340
PEADRR TACCAAAAACACATACACTTCTTGGCTTAGTTTCACTTTTGTTCTTAATAGCACTCATCA
ref|NG ATTAATTTTCAGGTCCTGTGGATGTCAATATTCTAGCTAAGTGTAACCCCTGCCTATCAA
320330 320340 320350 320360 320370 320380
>>ref|NG_029466.2| Homo sapiens F-box and (223330 nt)
rev-comp initn: 114 init1: 114 opt: 152 Z-score: 151.0 bits: 44.7 E(8960): 0.012
banded Smith-Waterman score: 152; 70.9% identity (70.9% similar) in 79 nt overlap (122-46:156232-156308)
150 140 130 120 110 100
PEADR- TCTGGAGCTGCTACTATTGCTGATGTTGCATTTGCTGCATTCTTTCCATTGTAAAGTATG
:::: : : : :: ::::::::: :::
ref|NG ACAAACAGCCTTAATTGTGTTCACTTATGTTTTGTTTC--TGTTGTCATTGTAAATTATT
156210 156220 156230 156240 156250
90 80 70 60 50 40
PEADR- TCATGAAAAT-AAAAGACTAGGTTT-TTGCATGGTTTATATGGCTTTCTCTTGTTTGGAA
:::::::::: ::::: :::: ::: : ::: :: : : : : :::
ref|NG TCATGAAAATGAAAAGCCTAGCTTTACTTCATAGTAACTTTTGGTCTCTTAGAAACTAGA
156260 156270 156280 156290 156300 156310
30 20 10
PEADR- TTGCTGAACTTAAAGCAAACAACATCACAAAAAC
ref|NG AACTGTTGATTTTAGTTTTAATTTTCCCAATCCAAGTTCTTTTCAATTCTAAATCTTTTT
156320 156330 156340 156350 156360 156370
>>ref|NG_008317.2| Homo sapiens fibroblast (687920 nt)
rev-comp initn: 99 init1: 99 opt: 148 Z-score: 139.5 bits: 43.6 E(8960): 0.025
banded Smith-Waterman score: 148; 67.5% identity (67.5% similar) in 83 nt overlap (107-26:343885-343963)
130 120 110 100 90 80
PEADR- ATTGCTGATGTTGCATTTGCTGCATTCTTTCCATTGTAAAGTATGTCATGAAAATAAAAG
:: : :: :: : : : ::::::: : :
ref|NG TTTAGGAAATGCTGTTGGTTTTAAGCAACACCTTGGTCAAATTTTTAGTGAAAATTATA-
343860 343870 343880 343890 343900 343910
70 60 50 40 30 20
PEADR- ACTAGGTTTTTGCAT-GGTTTATATGGCTTTCTCTTGTTTGGAATTGCTGAACTTAAAGC
: ::::::::: :: :: :::::: ::: ::: : ::::::::::
ref|NG ---ATATTTTTGCATAAAACTAGATAGCTTTCACTTTTTTAGTATTGCTGAACACATTTT
343920 343930 343940 343950 343960 343970
10
PEADR- AAACAACATCACAAAAAC
ref|NG TTCTTATCATTGAGAGTATATTCCATAATGGTCTGAAAGAATTCACAACTTAAAGAATAG
343980 343990 344000 344010 344020 344030
>>ref|NG_008111.1| Homo sapiens gamma-gluta (52255 nt)
initn: 96 init1: 96 opt: 147 Z-score: 146.1 bits: 43.3 E(8960): 0.03
banded Smith-Waterman score: 147; 65.7% identity (65.7% similar) in 108 nt overlap (42-139:1938-2045)
20 30 40 50 60
PEADRR GTTGTTTGCTTTAAGTTCAGCAATTCCAAACAAGAGAAAGCCATATAAA---CCATGCAA
::::::::: : ::: : ::::::::
ref|NG ATCCCCACATTCCATTCCTAGGTATTTACCCAAGAGAAAAGGAAATATATGTCCATGCAA
1910 1920 1930 1940 1950 1960
70 80 90 100 110 120
PEADRR AAACCTAGTCTTTTATTTTCATGACA---TACTTTACAATGG--AAAGAAT-GCAGCAAA
:::: :: : : :::::::: :: : ::: ::: : ::: : : : : :::
ref|NG AAACTTATACATGAATTTTCATAGCAGCTTTATTTGTAATAGCCAAAAACTGGAAACAAC
1970 1980 1990 2000 2010 2020
130 140 150 160 170 180
PEADRR TGCAACAT-CAGCAATAGTAGCAGCTCCAGAAGGTGTTAGTTTAACTAAATTGGCACCTC
: ::::: :: ::: ::
ref|NG TCAAACATCCATCAACAGATGAATGGATAAATTGTGGCACACCGTCCAGTGCAATACTCG
2030 2040 2050 2060 2070 2080
>>ref|NG_015852.2| Homo sapiens MAGE family (10851 nt)
initn: 111 init1: 111 opt: 147 Z-score: 158.3 bits: 43.3 E(8960): 0.03
banded Smith-Waterman score: 147; 63.6% identity (63.6% similar) in 99 nt overlap (254-348:10226-10324)
230 240 250 260 270 280
PEADRR CATTAAGCCATAGCCTTTCTTCAAAACAAGTTGGAAGAGCACAAGGGTTTTATATTTATG
:: :::::::: :: :::::: :: ::
ref|NG TGGCTTGTTTTCATTCTCTTAACATTGTCCTTTGAAGAGCATAAAATTTTTATTTTAATA
10200 10210 10220 10230 10240 10250
290 300 310 320 330
PEADRR ATACCAAAAACACATACACTTCTTGGCTTAGTTTCACTTTTGTTCTT-AAT---AGCACT
: : ::: :: : ::::: ::: : :::::: : :: ::: : :::
ref|NG AAATCAACTTGGCAAATTTTTCTTTCCTTGATCATGCTTTTGGTGTTGAATTTAAAAACT
10260 10270 10280 10290 10300 10310
340 350 360 370 380 390
PEADRR CATCATCAAGGAACCATTACTTTTGCTGGAGCTGACCCAATTGTCGCCAAAACTAGAGAT
::::: :::
ref|NG CATCACCAAACTCAAAGTTATGTGGATTTTCTCTTACGTTTTCTTTTAGAGGTTGTATAG
10320 10330 10340 10350 10360 10370
>>ref|NG_034004.1| Homo sapiens olfactory r (7939 nt)
initn: 82 init1: 82 opt: 147 Z-score: 160.8 bits: 43.3 E(8960): 0.03
banded Smith-Waterman score: 147; 65.7% identity (65.7% similar) in 102 nt overlap (48-144:1529-1627)
20 30 40 50 60 70
PEADRR TGCTTTAAGTTCAGCAATTCCAAACAAGAGAAAGCCATATAAACCATGCA--AAAACCTA
::: ::::: ::::: :: : ::::::::
ref|NG AGATGGATTAAAGATTTAAACGTTAGACCTAAAACCATAAAAACCCTGGAAGAAAACCTA
1500 1510 1520 1530 1540 1550
80 90 100 110 120 130
PEADRR GTCTTTTATTTTCATGACATACTTTACAATGG-AAAGAATGCA--GCAAATGCAACATCA
: : :: :::: :::::: :: :: :: :: : :: : :: :: :: :
ref|NG GGCATTACCATTCAGGACATA---GGCATGGGCAAGGACTTCATGTCCAAAACACCAAAA
1560 1570 1580 1590 1600 1610
140 150 160 170 180 190
PEADRR GCAATAGTAGCAGCTCCAGAAGGTGTTAGTTTAACTAAATTGGCACCTCAATCCCACTTT
::::: ::: ::
ref|NG GCAATGGTAACAAAAGCCAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGC
1620 1630 1640 1650 1660 1670
>>ref|NG_053148.1| Homo sapiens calmodulin (991383 nt)
rev-comp initn: 170 init1: 96 opt: 145 Z-score: 135.0 bits: 42.8 E(8960): 0.044
banded Smith-Waterman score: 145; 69.0% identity (69.0% similar) in 71 nt overlap (289-219:21192-21261)
320 310 300 290 280 270
PEADR- TGAAACTAAGCCAAGAAGTGTATGTGTTTTTGGTATCATAAATATAAAACCCTTGTGCTC
: :: : ::::: :::::: : :: :
ref|NG CCTTGTCATTTGATGAGGGAACATAAACACTTGTTTAATAAAAATAAAAAAGTCATGAT-
21170 21180 21190 21200 21210 21220
260 250 240 230 220 210
PEADR- TTCCAACTTGTTTTGAAGAAAGGCTATGGCTTAATGTGATAGGGTCATCAAAAACTATTA
:: :: :: :::::: : : ::::::::: : ::::::
ref|NG TTTCAGAATGCTTTGAAAATAAGCTATGGCTAATGGTGATACACAATAGGAATGTCCCTA
21230 21240 21250 21260 21270 21280
200 190 180 170 160 150
PEADR- TGTTACCAAAGTGGGATTGAGGTGCCAATTTAGTTAAACTAACACCTTCTGGAGCTGCTA
ref|NG ATTTCACTAAATTGTATGCTCAAAAAGGGTTAAAGTGGTAAATTTTATGTTATGCATATT
21290 21300 21310 21320 21330 21340
>>ref|NG_031854.2| Homo sapiens glutamate (451676 nt)
initn: 111 init1: 111 opt: 143 Z-score: 132.0 bits: 42.2 E(8960): 0.065
banded Smith-Waterman score: 143; 70.5% identity (70.5% similar) in 61 nt overlap (404-464:120446-120506)
380 390 400 410 420 430
PEADRR ACCCAATTGTCGCCAAAACTAGAGATATTTCTGTCACTGGTGGTACTGGAGATTTCTTTA
:::: :: :: :: : :::::::: : ::
ref|NG CCTTCAGCCCAAGAACAGTACAAGGGTGGGCTGTAACAGGAGGGCCAGGAGATTTGTGTA
120420 120430 120440 120450 120460 120470
440 450 460 470 480 490
PEADRR TGCATAGAGGAATTGCTACTATTACCACTGATGCCTTTGAAGGCGAGGCTTATTTTCGAC
:::::: : :: ::::: :::::: :
ref|NG TGCATACTCGCATGGCTACCTGGACCACTCACAACCTCTTTTCCTCCTTTGTCTCTGCCT
120480 120490 120500 120510 120520 120530
500 510 520
PEADRR TTGGTGTTTATATCAAGTTCTTTGAGTGTTGGTAA
ref|NG GTAGCTGCCAATGACTATAGCAATAGCACCTTTTATTGCCTTGTTCAAGGATTTCTGAGG
120540 120550 120560 120570 120580 120590
>>ref|NG_029658.2| Homo sapiens BTB domain (69998 nt)
initn: 97 init1: 97 opt: 141 Z-score: 134.9 bits: 41.7 E(8960): 0.096
banded Smith-Waterman score: 141; 62.2% identity (62.2% similar) in 111 nt overlap (262-368:37589-37696)
240 250 260 270 280 290
PEADRR CATAGCCTTTCTTCAAAACAAGTTGGAAGAGCACAAGGGTTTTATATTTATGATACCAAA
:: :::::::::::: ::: :::::: ::
ref|NG TATTATCCTTTAGAACTACTCTATTTCTTGGCTCAAGGGTTTTATTTTTTTGATACAAAT
37560 37570 37580 37590 37600 37610
300 310 320 330 340
PEADRR AACACATACACTTCTTGGCTTAGTTTCACTTTTGTTCTTAATAGCACTCATC----ATCA
: :::: :: : : ::: :: : :: : :: ::: :: ::: :: :
ref|NG CAGACATTGGTTTGCTAGATTA--TTGATATTGCTACTAAATTTCAGATATCTAGGATGA
37620 37630 37640 37650 37660 37670
350 360 370 380 390 400
PEADRR AGGAACCATTACTTTTGCTGGAGCTGACCCAATTGTCGCCAAAACTAGAGATATTTCTGT
: ::: : :: :: : :::
ref|NG A-GAAGCCTTGCTATCTTTGGGCTTTCTTCTCCCTCTGCCTTTCCTTCTTAGAGAGGTGG
37680 37690 37700 37710 37720 37730
>>ref|NG_033050.2| Homo sapiens STON1-GTF2 (253593 nt)
rev-comp initn: 95 init1: 95 opt: 140 Z-score: 130.3 bits: 41.4 E(8960): 0.12
banded Smith-Waterman score: 140; 62.0% identity (62.0% similar) in 142 nt overlap (207-68:165806-165940)
230 220 210 200 190 180
PEADR- GCTATGGCTTAATGTGATAGGGTCATCAAAAACTATTATGTTACCAAAGTGGGATTGAGG
:: :::::: ::: : :: : :::
ref|NG TCTATGAAGGCTTTCTTGATTATAGTACCCAAGTATTAT-TTATCCTCCTGCCA--GAGC
165780 165790 165800 165810 165820 165830
170 160 150 140 130 120
PEADR- TGCCAATTTAGTTAAACTAACACCTTCTGGAGCTGCTACTATT-GCTGATGTTGCATTTG
::: : ::: : :: : : :: : :: : : ::: ::::: ::::: :
ref|NG TGC--ACTTAATACAATTGCAATTATCAAAACCTATTGCAATTAAGTGATGATGCATGT-
165840 165850 165860 165870 165880
110 100 90 80 70
PEADR- CTGCATTCTTTCCATTGT-AAAGTATGTCATGAAAATAAAAGACTAGGTTTTTGCATGGT
:: :::::: ::::: :: : :: :::::: : : :::::::::::
ref|NG CTATCTTCTTT-AATTGTCTAATCACTTCTTGAAAACAGAGGACTAGGTTTTACTTATTT
165890 165900 165910 165920 165930 165940
60 50 40 30 20 10
PEADR- TTATATGGCTTTCTCTTGTTTGGAATTGCTGAACTTAAAGCAAACAACATCACAAAAAC
ref|NG CTGAAATCCCAGTGCCTAGCACAGTTTTGGCTCAGAGTGTTCATTCAATACATGTTTGTA
165950 165960 165970 165980 165990 166000
>>ref|NG_008193.2| Homo sapiens luteinizin (75968 nt)
initn: 95 init1: 95 opt: 140 Z-score: 132.8 bits: 41.4 E(8960): 0.12
banded Smith-Waterman score: 140; 62.0% identity (62.0% similar) in 142 nt overlap (68-207:69878-70012)
40 50 60 70 80 90
PEADRR CAAACAAGAGAAAGCCATATAAACCATGCAAAAACCTAGTCTTTTATTTTCATGACAT-A
::::::::::: : : :::::: :: : :
ref|NG GTGCTAGGCACTGGGATTTCAGAAATAAGTAAAACCTAGTCCTCTGTTTTCAAGAAGTGA
69850 69860 69870 69880 69890 69900
100 110 120 130 140 150
PEADRR CTTTACAATGGAAAGAATGCAGCAAATGCAACATCA-GCAATAGTAGCAGCTCCAGAAGG
: ::::: :::::: :: : ::::: ::::: ::: : : :: : ::
ref|NG TTAGACAAT-TAAAGAAGATAG-ACATGCATCATCACTTAATTGCAATAGGTTTTGATAA
69910 69920 69930 69940 69950 69960
160 170 180 190 200 210
PEADRR TGTTAGTTTAACTAAATTGGCACCTCAATCCCACTTTGGTAACATAATAGTTTTTGATGA
: : :: : ::: : ::: ::: : :: : ::: :::::: ::
ref|NG TTGCAATTGTATTAAGT--GCAGCTC--TGGCAGGAGGATAA-ATAATACTTGGGTACTA
69970 69980 69990 70000 70010 70020
220 230 240 250 260 270
PEADRR CCCTATCACATTAAGCCATAGCCTTTCTTCAAAACAAGTTGGAAGAGCACAAGGGTTTTA
ref|NG TAATCAAGAAAGCCTTCATAGAAGAGCTTATCTTTACAGATGAGGAGGAATTCACCAGAG
70030 70040 70050 70060 70070 70080
>>ref|NG_042811.1| Homo sapiens protein kin (185480 nt)
rev-comp initn: 131 init1: 131 opt: 138 Z-score: 124.5 bits: 40.9 E(8960): 0.17
banded Smith-Waterman score: 138; 64.1% identity (64.1% similar) in 78 nt overlap (334-257:38736-38813)
360 350 340 330 320 310
PEADR- CAAAAGTAATGGTTCCTTGATGATGAGTGCTATTAAGAACAAAAGTGAAACTAAGCCAAG
:::::: :::::::: ::: : : ::
ref|NG GTACATCCCAAACCCAATGCATGCTGTCCATATTAAAAACAAAAGCAAAAATGAAACATA
38710 38720 38730 38740 38750 38760
300 290 280 270 260 250
PEADR- AAGTGTATGTGTTTTTGGTATCATAAATATAAAACCCTTGTGCTCTTCCAACTTGTTTTG
: :: :::: : ::: : : :: ::::::::::: :: :
ref|NG AGATGGATGTTGTGGGGGTGTGGGGGACATGGAACCCTTGTGCGCTGCTGTCGGGAATGT
38770 38780 38790 38800 38810 38820
240 230 220 210 200 190
PEADR- AAGAAAGGCTATGGCTTAATGTGATAGGGTCATCAAAAACTATTATGTTACCAAAGTGGG
ref|NG GAGTTGGTACAGCCACAGTGGAAGGAAGCTTGGCATTTCCCAGGAAAGTTAAACATGCAG
38830 38840 38850 38860 38870 38880
>>ref|NG_053184.1| Homo sapiens teashirt z (530022 nt)
initn: 91 init1: 91 opt: 138 Z-score: 129.3 bits: 40.9 E(8960): 0.17
banded Smith-Waterman score: 138; 64.7% identity (64.7% similar) in 102 nt overlap (48-144:510235-510333)
20 30 40 50 60 70
PEADRR TGCTTTAAGTTCAGCAATTCCAAACAAGAGAAAGCCATATAAACCATGCA--AAAACCTA
::: ::::: ::::: : : ::::::::
ref|NG AGATGGATTAAAGACTTAAACGTTAGACCTAAAACCATAAAAACCCTAGAAGAAAACCTA
510210 510220 510230 510240 510250 510260
80 90 100 110 120 130
PEADRR GTCTTTTATTTTCATGACATACTTTACAATGG-AAAGAATGCA--GCAAATGCAACATCA
: :::: :::: :::::: :: :: :: :: : :: : :: :: :: :
ref|NG GGCTTTACCATTCAGGACATA---GGCATGGGCAAGGACTTCATGTCTAAAACACCAAAA
510270 510280 510290 510300 510310 510320
140 150 160 170 180 190
PEADRR GCAATAGTAGCAGCTCCAGAAGGTGTTAGTTTAACTAAATTGGCACCTCAATCCCACTTT
::::: : : ::
ref|NG GCAATGGCAACAAAAGACAAAATTGACAATTGGGATCTAATTAAACTAAAGAGCTTCTGC
510330 510340 510350 510360 510370 510380
>>ref|NG_012107.1| Homo sapiens opioid bind (1124529 nt)
rev-comp initn: 91 init1: 91 opt: 138 Z-score: 129.8 bits: 40.8 E(8960): 0.17
banded Smith-Waterman score: 138; 64.7% identity (64.7% similar) in 102 nt overlap (144-48:1053463-1053561)
170 160 150 140 130 120
PEADR- CAATTTAGTTAAACTAACACCTTCTGGAGCTGCTACTATTGCTGATGTTGCATTTG--CT
:: : : :::::: :: :: :: : :
ref|NG AATTAGGTCCCATTTGTCAATTTTGGCTTTTGTTGCCATTGCTTTTGGTGTTTTAGACAT
1053440 1053450 1053460 1053470 1053480 1053490
110 100 90 80 70
PEADR- GCA-TTCTTTCCATTGTAAAGTATGTCATGAAAATAAAAGACTAGGTTT--TTGCATGGT
: : : ::: :: :: :::::: :::: :::: :::::::: :: : :::
ref|NG GAAGTCCTTGCCCATG---CCTATGTCCTGAACGGTAAAGCCTAGGTTTTCTTTTAGGGT
1053500 1053510 1053520 1053530 1053540
60 50 40 30 20 10
PEADR- TTATATGGCTTTCTCTTGTTTGGAATTGCTGAACTTAAAGCAAACAACATCACAAAAAC
:: ::::: :::
ref|NG TTTTATGGTTTTAGGTCTAACATTTAAGTCTTTAATCCATCTTGAATTGATTTTTGTATA
1053550 1053560 1053570 1053580 1053590 1053600
>>ref|NG_042824.1| Homo sapiens dynein regu (61800 nt)
rev-comp initn: 96 init1: 96 opt: 138 Z-score: 131.4 bits: 40.8 E(8960): 0.17
banded Smith-Waterman score: 138; 73.0% identity (73.0% similar) in 63 nt overlap (280-222:737-799)
310 300 290 280 270 260
PEADR- GCCAAGAAGTGTATGTGTTTTTGGTATCATAAATATAAAA-CCCTTGTGCTCTTCCAACT
: :::::::: : : :: :: ::: ::
ref|NG ATGTAGAATTAAGTGTGACTAGACTTAGTAAGATATAAAATCAAATCTGTTCATCCTTCT
710 720 730 740 750 760
250 240 230 220 210 200
PEADR- TGTTTTGAAGAAAGGCTAT---GGCTTAATGTGATAGGGTCATCAAAAACTATTATGTTA
::::::::: ::::::::: ::: :: :::
ref|NG TGTTTTGAAAAAAGGCTATAAAAGCTGAAGGTGGATGCCCACATACCTTCCTTAGCAAGG
770 780 790 800 810 820
190 180 170 160 150 140
PEADR- CCAAAGTGGGATTGAGGTGCCAATTTAGTTAAACTAACACCTTCTGGAGCTGCTACTATT
ref|NG GAAGCCCATATAGCCAGATTCCTCAAAAACCTACTCAGGGATGAGGAACTCGACTGTGCT
830 840 850 860 870 880
>>ref|NG_030049.2| Homo sapiens checkpoint (58120 nt)
initn: 89 init1: 89 opt: 138 Z-score: 131.8 bits: 40.8 E(8960): 0.17
banded Smith-Waterman score: 138; 64.3% identity (64.3% similar) in 84 nt overlap (11-94:3794-3875)
10 20 30 40
PEADRR GTTTTTGTGATGTTGTTTGCTTTAAGTTCAGCAATTCCAA
: :: :::: ::: :: :: ::
ref|NG ACACAGGAAATTTGCAGGTCTTCCTCTTCGTATTCTTTGTTTTCAGCACACAGTGAGGAA
3770 3780 3790 3800 3810 3820
50 60 70 80 90 100
PEADRR ACAAGAGAAAGCCATATAAACCATGCAAAAACCTAGTCTTTTATTTTCATGACATACTTT
:::::::::: ::::: :: :::::: : :::::::::: :: ::
ref|NG ACAAGAGAAAATGGGATAAATGATATAAAAACTT--GCTTTTATTTTTATACCAGGCCCT
3830 3840 3850 3860 3870 3880
110 120 130 140 150 160
PEADRR ACAATGGAAAGAATGCAGCAAATGCAACATCAGCAATAGTAGCAGCTCCAGAAGGTGTTA
ref|NG GTGGCTCGCTTCTGTAATCCCAGTGACTTGGGATGCTGAGGTAGGAGGATCACTTGAGCT
3890 3900 3910 3920 3930 3940
>>ref|NG_008999.1| Homo sapiens CDK5 regula (198291 nt)
rev-comp initn: 91 init1: 91 opt: 138 Z-score: 133.3 bits: 40.8 E(8960): 0.17
banded Smith-Waterman score: 138; 64.7% identity (64.7% similar) in 102 nt overlap (144-48:154919-155017)
170 160 150 140 130 120
PEADR- CAATTTAGTTAAACTAACACCTTCTGGAGCTGCTACTATTGCTGATGTTGCATTTG--CT
:: : : :::::: :: :: :: : :
ref|NG AATTAGATCCCATTTGTCAATTTTGGCTTTTGTTGCCATTGCTTTTGGTGTTTTAGACAT
154890 154900 154910 154920 154930 154940
110 100 90 80 70
PEADR- GCA-TTCTTTCCATTGTAAAGTATGTCATGAAAATAAAAGACTAGGTTT--TTGCATGGT
: : : ::: :: :: :::::: :::: : :: : :::::::: :: : :::
ref|NG GAAGTCCTTGCCCATG---CCTATGTCCTGAATAGTAATGCCTAGGTTTTCTTCTAGGGT
154950 154960 154970 154980 154990 155000
60 50 40 30 20 10
PEADR- TTATATGGCTTTCTCTTGTTTGGAATTGCTGAACTTAAAGCAAACAACATCACAAAAAC
:: ::::: :::
ref|NG TTTTATGGTTTTAGGTCTAACATTTAAGTCTTTAATCCATCTTGAATTAATTTTTGTATA
155010 155020 155030 155040 155050 155060
>>ref|NG_016173.1| Homo sapiens ATXN8 oppos (39541 nt)
rev-comp initn: 170 init1: 103 opt: 138 Z-score: 134.8 bits: 40.8 E(8960): 0.17
banded Smith-Waterman score: 138; 61.1% identity (61.1% similar) in 108 nt overlap (154-47:37178-37278)
180 170 160 150 140 130
PEADR- ATTGAGGTGCCAATTTAGTTAAACTAACACCTTCTGGAGCTGCTACTATTGCTGATGTTG
:: ::: :::::: :: ::::: :: ::
ref|NG CTACTACTACTACTACTACTACTACTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTG
37150 37160 37170 37180 37190 37200
120 110 100 90 80 70
PEADR- CATTTGCTGCATTCTTTCCATTGTAAAGTATGTCATGAAAATAAAAGACTAGGTTTTTGC
: ::::::::: ::: ::: ::: : :: : : : : : : : ::
ref|NG CTGCTGCTGCATTTTTT------AAAAATATATTATCTTATTTTACTATTTGATGTTATA
37210 37220 37230 37240 37250 37260
60 50 40 30 20 10
PEADR- ATGGTTTATATGGCTTTCTCTTGTTTGGAATTGCTGAACTTAAAGCAAACAACATCACAA
:: : :::::: ::::
ref|NG ATTG-TTATATATTTTTCCACACTTCCTCATACTGCTTATCTCTTACTTAAGAATTTATG
37270 37280 37290 37300 37310 37320
>>ref|NG_042806.1| Homo sapiens STT3 oligos (36965 nt)
initn: 89 init1: 89 opt: 138 Z-score: 135.4 bits: 40.8 E(8960): 0.17
banded Smith-Waterman score: 138; 64.3% identity (64.3% similar) in 84 nt overlap (11-94:36135-36216)
10 20 30 40
PEADRR GTTTTTGTGATGTTGTTTGCTTTAAGTTCAGCAATTCCAA
: :: :::: ::: :: :: ::
ref|NG ACACAGGAAATTTGCAGGTCTTCCTCTTCGTATTCTTTGTTTTCAGCACACAGTGAGGAA
36110 36120 36130 36140 36150 36160
50 60 70 80 90 100
PEADRR ACAAGAGAAAGCCATATAAACCATGCAAAAACCTAGTCTTTTATTTTCATGACATACTTT
:::::::::: ::::: :: :::::: : :::::::::: :: ::
ref|NG ACAAGAGAAAATGGGATAAATGATATAAAAACTT--GCTTTTATTTTTATACCAGGCCCT
36170 36180 36190 36200 36210 36220
110 120 130 140 150 160
PEADRR ACAATGGAAAGAATGCAGCAAATGCAACATCAGCAATAGTAGCAGCTCCAGAAGGTGTTA
ref|NG GTGGCTCGCTTCTGTAATCCCAGTGACTTGGGATGCTGAGGTAGGAGGATCACTTGAGCT
36230 36240 36250 36260 36270 36280
>>ref|NG_013228.2| Homo sapiens chondrosarc (13251 nt)
initn: 111 init1: 111 opt: 138 Z-score: 143.3 bits: 40.8 E(8960): 0.17
banded Smith-Waterman score: 138; 62.6% identity (62.6% similar) in 99 nt overlap (254-348:9330-9428)
230 240 250 260 270 280
PEADRR CATTAAGCCATAGCCTTTCTTCAAAACAAGTTGGAAGAGCACAAGGGTTTTATATTTATG
:: :::::::::: : ::::: :: ::
ref|NG GCTTCTGTTTTCATTCTCTTAACATTGTCTTTTGAAGAGCACATGATGTTTATTTTAATA
9300 9310 9320 9330 9340 9350
290 300 310 320 330
PEADRR ATACCAAAAACACATACACTTCTTGGCTTAGTTTCACTTTTGTTCTT-AAT---AGCACT
: : ::: :: : ::::: ::: : :::::: : :: ::: : :::
ref|NG AAATCAACTTGGCAAATTTTTCTTTCCTTGATCATGCTTTTGGTGTTGAATTTAAAAACT
9360 9370 9380 9390 9400 9410
340 350 360 370 380 390
PEADRR CATCATCAAGGAACCATTACTTTTGCTGGAGCTGACCCAATTGTCGCCAAAACTAGAGAT
:::: :::
ref|NG CATCTCCAAACTCAAAGTTATGTGGATTTCTCTCATGTTTTCTTATAGAGGTTGTATTGT
9420 9430 9440 9450 9460 9470
>>ref|NG_051659.1| Homo sapiens SLIT-ROBO (310111 nt)
rev-comp initn: 91 init1: 91 opt: 138 Z-score: 145.2 bits: 40.8 E(8960): 0.17
banded Smith-Waterman score: 139; 60.6% identity (60.6% similar) in 137 nt overlap (171-48:299984-300120)
200 190 180 170 160 150
PEADR- TATGTTACCAAAGTGGGATTGAGGTGCCAATTTAGTTAAACTA-ACACCTTCTG-GAGCT
::::::: :: :: : :: : :: : :
ref|NG ATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATT
299960 299970 299980 299990 300000 300010
140 130 120 110 100
PEADR- GCTACTATTGCTGATGTTGCATTTGCTG-------CATTCTTTCCATTGTAAAG--TATG
:: ::: :: :::: :::: :: ::: ::: : : : ::::
ref|NG TTGTCTTTTGTTGCCATTGCTTTTGGTGTTTTAGACATGAAGTCCTTGCCCATGCCTATG
300020 300030 300040 300050 300060 300070
90 80 70 60 50 40
PEADR- TCATGAAAATAAAAGACTAGGTTT--TTGCATGGTTTATATGGCTTTCTCTTGTTTGGAA
:: :::: : :: : :::::::: :: : ::::: ::::: :::
ref|NG TCCTGAATAATAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTCTAATGTTT
300080 300090 300100 300110 300120 300130
30 20 10
PEADR- TTGCTGAACTTAAAGCAAACAACATCACAAAAAC
ref|NG AAGTCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTC
300140 300150 300160 300170 300180 300190
>>ref|NG_042151.1| Homo sapiens olfactory r (8097 nt)
rev-comp initn: 91 init1: 91 opt: 136 Z-score: 144.2 bits: 40.3 E(8960): 0.25
banded Smith-Waterman score: 139; 60.6% identity (60.6% similar) in 137 nt overlap (171-48:2415-2551)
200 190 180 170 160 150
PEADR- TATGTTACCAAAGTGGGATTGAGGTGCCAATTTAGTTAAACTA-ACACCTTCTG-GAGCT
::::::: :: :: : :: : :: : :
ref|NG ATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATT
2390 2400 2410 2420 2430 2440
140 130 120 110 100
PEADR- GCTACTATTGCTGATGTTGCATTTGCTG-------CATTCTTTCCATTGTAAAG--TATG
:: ::: :: :::: :::: :: ::: ::: : : : ::::
ref|NG TTGGCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCACGCCTATG
2450 2460 2470 2480 2490 2500
90 80 70 60 50 40
PEADR- TCATGAAAATAAAAGACTAGGTTT--TTGCATGGTTTATATGGCTTTCTCTTGTTTGGAA
:: ::::: :: : :::::::: :: : ::::: ::::: :::
ref|NG TCCTGAAAGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTCTAACGTTT
2510 2520 2530 2540 2550 2560
30 20 10
PEADR- TTGCTGAACTTAAAGCAAACAACATCACAAAAAC
ref|NG AAATCTTTAATCCATCTTGAATTGATTTTTGTATAAGCTGTAAGGAAGGGATCCAGTTTC
2570 2580 2590 2600 2610 2620
>>ref|NG_008807.2| Homo sapiens dihydropyri (850317 nt)
initn: 193 init1: 124 opt: 135 Z-score: 120.0 bits: 40.0 E(8960): 0.3
banded Smith-Waterman score: 135; 71.7% identity (71.7% similar) in 60 nt overlap (400-459:733276-733334)
370 380 390 400 410 420
PEADRR GCTGACCCAATTGTCGCCAAAACTAGAGATATTTCTGTCACTGGTGGTACTGGAGATTTC
::: : :: ::: :: :::::::::::
ref|NG AAATTCTTGCTTACTGTGGTGATGACTGGCATTCTTCCCAGTGGGAGT-CTGGAGATTTC
733250 733260 733270 733280 733290 733300
430 440 450 460 470 480
PEADRR TTTATGCATAGAGGAATTGCTACTATTACCACTGATGCCTTTGAAGGCGAGGCTTATTTT
::::::: : :::: : :: ::::::
ref|NG TTTATGCTTTCTGGAAATTATAACATTACCTTTCTATTTTCAAGACAATCAAATCACTGT
733310 733320 733330 733340 733350 733360
>>ref|NG_021308.2| Homo sapiens PDS5 cohes (198594 nt)
rev-comp initn: 135 init1: 135 opt: 135 Z-score: 120.0 bits: 40.0 E(8960): 0.3
banded Smith-Waterman score: 135; 72.2% identity (72.2% similar) in 54 nt overlap (54-1:3623-3676)
80 70 60 50 40 30
PEADR- ATAAAAGACTAGGTTTTTGCATGGTTTATATGGCTTTCTCTTGTTTGGAATTGCTGAACT
::::::: :: ::::::: :::
ref|NG CTGGCTTTCTTCTGAAACTTTCTGGCTTCCTGGCTTTGGAGGTTTGGGAATTGAAGAAAA
3600 3610 3620 3630 3640 3650
20 10
PEADR- TAAAGCAAACAACATCACAAAAAC
::::: ::: ::::: : ::::::
ref|NG TAAAGTAAAAAACATAATAAAAACAACCAAAGAGGAAAGGTTTTTCTAGATCTAGACATC
3660 3670 3680 3690 3700 3710
>>ref|NG_031854.2| Homo sapiens glutamate (451676 nt)
rev-comp initn: 151 init1: 88 opt: 134 Z-score: 118.5 bits: 39.7 E(8960): 0.37
banded Smith-Waterman score: 134; 68.4% identity (68.4% similar) in 79 nt overlap (101-29:283439-283517)
130 120 110 100 90 80
PEADR- GATGTTGCATTTGCTGCATTCTTTCCATTGTAAAGTATGTCATGAAAATAAAAGACTA--
:::::::: :::::::::::: : ::
ref|NG ATTTGTGTGTGTATGTGTAGAGAGAGAGATTAAAGTATTGAATGAAAATAAAACATTACA
283410 283420 283430 283440 283450 283460
70 60 50 40 30 20
PEADR- -GGTTTTTGCATGGTTTATATGGCTTTCTCTTG--TTTGGA-ATTGCTGAACTTAAAGCA
:: :: :: :: :::: ::::: ::: :::: : :::: ::
ref|NG GCAGTTATGTATAATTGATATATATTTCTGTTGTATTTGCATATTGATGCCTAGATGTTT
283470 283480 283490 283500 283510 283520
10
PEADR- AACAACATCACAAAAAC
ref|NG TCATCTGGGAAAGTTGCTAAAATAATAATGTGGGTTGTCTCTACAAAGTGAAATTATTAT
283530 283540 283550 283560 283570 283580
>>ref|NG_007491.3| Homo sapiens forkhead b (614463 nt)
rev-comp initn: 101 init1: 101 opt: 134 Z-score: 118.5 bits: 39.7 E(8960): 0.37
banded Smith-Waterman score: 138; 60.3% identity (60.3% similar) in 156 nt overlap (291-149:204217-204372)
320 310 300 290 280 270
PEADR- AGTGAAACTAAGCCAAGAAGTGTATGTGTTTTTGGTATCATAAATATAAAACCCTTGT--
:::: : :::::: : : : : :::
ref|NG TATTTTACAGTAGAGGTGCCCATAGGGTGCTTTGAGAGCATAAAGAACATAGACATGTTA
204190 204200 204210 204220 204230 204240
260 250 240 230 220
PEADR- GCTCTTCCAACTTGTTTTGAAGA--AAGGCTATGGCTTA---ATGTGATAG-GGTCATCA
: :::::::: :::::::::::: :: ::: ::: : :: ::: :: : ::
ref|NG GGTCTTCCAAATTGTTTTGAAGAATAACTTTATAATTTATGCTTTTGTTAGCAGTAAACA
204250 204260 204270 204280 204290 204300
210 200 190 180 170 160
PEADR- AAAACTATTATGTTACCAAAGTGGGATTGA-GGTGC---CAATTTAGTTAAACTAACAC-
: : : : :: :: : : : : :: : ::: :::: : : ::: : : :
ref|NG AGAGTTCTCATCTTTCTATATTCTTATCAACACTGCGCAGAATTCATTCAAATTCATGCT
204310 204320 204330 204340 204350 204360
150 140 130 120 110 100
PEADR- CTTCTGGAGCTGCTACTATTGCTGATGTTGCATTTGCTGCATTCTTTCCATTGTAAAGTA
::::::
ref|NG CTTCTGATGACATAAAGTGGTATCTCATTGGTTTTTTAATTTGCATCTTCCTGATTGCTA
204370 204380 204390 204400 204410 204420
>>ref|NG_030585.1| Homo sapiens insulin lik (65734 nt)
rev-comp initn: 88 init1: 88 opt: 134 Z-score: 124.9 bits: 39.7 E(8960): 0.37
banded Smith-Waterman score: 134; 59.0% identity (59.0% similar) in 139 nt overlap (136-4:604-737)
160 150 140 130 120 110
PEADR- TTAAACTAACACCTTCTGGAGCTGCTACTATTGCTGATGTTGCATTTGCTGCATTCTTTC
: :::: : :: :::::: : :::::::
ref|NG AATAAATTGTATTTTAATGTATTTCCCTCCTAGCTGCT-TTCCATTTGTTTTGTTCTTTC
580 590 600 610 620 630
100 90 80 70 60
PEADR- CATTGTAAAGTATGTCA-----TGAAAATAAAAGACTAGGTTTTTGCATGGTTTATATGG
::::::: ::: : : :::::: :::: : :: :: : :::: : :
ref|NG TTTTGTAAAACATGCTACACTTTAAAAATAGAAGAGTCAGTAAGTGTTAGATTTAAAATG
640 650 660 670 680 690
50 40 30 20 10
PEADR- CTTTCTCT-TGTTTGGAATTGCTGAACTTAAAGCAAACAACATCACAAAAAC
: : : : : : :: ::: :: :::: : ::: :: :::
ref|NG CAATATATATTCTGGGGATTTATG----CAAAGGAGCTAACCCCAAAAAGGAAAAATTTA
700 710 720 730 740
ref|NG TATTCACCAGAATATCTGTTCAGCACTGTTTACAAAAGTAAAAAATTTGATGAAATGTAT
750 760 770 780 790 800
>>ref|NG_054905.1| Homo sapiens mono-ADP r (2064698 nt)
rev-comp initn: 118 init1: 118 opt: 133 Z-score: 117.0 bits: 39.5 E(8960): 0.44
banded Smith-Waterman score: 133; 66.2% identity (66.2% similar) in 80 nt overlap (141-65:337998-338077)
170 160 150 140 130 120
PEADR- TTTAGTTAAACTAACACCTTCTGGAGCTGCTACTATTG-CTGATGTTGCATTTGCTGCAT
:: ::: : :: : : : ::: : ::
ref|NG CAAAGTATAGATTTATACTGATGTATTGTGTAATATAGTCTCTTCTGTCCTTTTAAGTAT
337970 337980 337990 338000 338010 338020
110 100 90 80 70 60
PEADR- TCTTT--CCATTGTAAAGTATGTCATGAAAATAAAAGACTAGGTTTTTGCATGGTTTATA
: :: :: :::::: : : ::::::::::::: ::: :::::: :
ref|NG TAATTAGCCTTTGTAATTTTAGGCATGAAAATAAAATACTTTGTTTTTCCTACCTTATTG
338030 338040 338050 338060 338070 338080
50 40 30 20 10
PEADR- TGGCTTTCTCTTGTTTGGAATTGCTGAACTTAAAGCAAACAACATCACAAAAAC
ref|NG AACGATGTGAGTAAATTTTGCGGGGGTGAATATCCAATGCACATATATTATTTTCCTGGT
338090 338100 338110 338120 338130 338140
>>ref|NG_011445.2| Homo sapiens FER tyrosin (456020 nt)
rev-comp initn: 105 init1: 105 opt: 133 Z-score: 117.0 bits: 39.5 E(8960): 0.44
banded Smith-Waterman score: 133; 56.1% identity (56.1% similar) in 287 nt overlap (307-33:134694-134963)
330 320 310 300 290
PEADR- TGCTATTAAGAACAAAAGTGAAACTAAGCCAAGAAGTGTAT-GTGTTTTTG-GTATCATA
:::: ::: : :: : : : : ::::
ref|NG TCTTCTGTTTACTCTTGAGAAAAGCTCATAAAGATTTGTGTCATGGTATAGATTGTCATC
134670 134680 134690 134700 134710 134720
280 270 260 250 240 230
PEADR- AATATAAAACCCTTGTGCTCTTCCAACTTGTTTTGAAGAAAGGCTATGGC-TTAATGTGA
::: ::: :: : ::::::: ::: : ::: :::::: : ::::: :: :
ref|NG CATAAAAATCC--TATGCTCTTGCAATTATATTTTAAGAAA-GAGATGGCAAGAAATAGT
134730 134740 134750 134760 134770 134780
220 210 200 190 180 170
PEADR- TAGGGTCATCAAAAACTATTATGTTACCAAAGTGGGATTGAGGTGCCAATTTAGTTA---
: :: :: :: ::: :: :: : :: : : ::: ::::: :::::
ref|NG TTATGTTTTC--AATTTATATTGCAACAATAGAGAAAAAGAGATGCCAGAAAAGTTACCT
134790 134800 134810 134820 134830
160 150 140 130 120 110
PEADR- -----AACTAACACCTTCTGGAGCTGCTACTATTGCTGATGTTGCATTTGCTGCATTCTT
:::: : : ::: : : :: : :::: :: : : : : :
ref|NG CAGGCAACT-ATAAATTCCATTTTTTTAATTAACCCAAATGTCACACT---TAAAGTTTC
134840 134850 134860 134870 134880 134890
100 90 80 70 60
PEADR- TCCATTGTAAAGTATGTCATGAAAATAAAAGACTAGGTTTTTGCATGGTTTAT-ATGGCT
::::: :: :: ::::: :: ::: :: :: :: ::::::: : : : :
ref|NG AGCATTGCAA---ATTTCATG-TAAGAAATGA-AAG---TTAAGATGGTTTGTCAAGTCA
134900 134910 134920 134930 134940
50 40 30 20 10
PEADR- TTCTCTTGTTTGGAATTGCTGAACTTAAAGCAAACAACATCACAAAAAC
: : :: ::::::: :
ref|NG TAATTTTTTTTGGAAGTTGGAAGTTTGATCCCTTTAAGAGTGTTGTAAGATTTAGATCGT
134950 134960 134970 134980 134990 135000
>>ref|NG_033913.1| Homo sapiens fibronectin (20675 nt)
initn: 118 init1: 118 opt: 133 Z-score: 132.4 bits: 39.5 E(8960): 0.45
banded Smith-Waterman score: 133; 66.2% identity (66.2% similar) in 80 nt overlap (65-141:14092-14171)
40 50 60 70 80 90
PEADRR TTCCAAACAAGAGAAAGCCATATAAACCATGCAAAAACCTAGTCTTTTATTTTCATGACA
: :::::: ::: ::::::::::::: :
ref|NG CAAAATTTACTCACATCGTTCAATAAGGTAGGAAAAACAAAGTATTTTATTTTCATGCCT
14070 14080 14090 14100 14110 14120
100 110 120 130 140 150
PEADRR TACTTTACAATGG--AAAGAATGCAGCAAATGCAACATCAG-CAATAGTAGCAGCTCCAG
: :::::: :: :: ::: : ::: : : : :: : ::: ::
ref|NG AAAATTACAAAGGCTAATTAATACTTAAAAGGACAGAAGAGACTATATTACACAATACAT
14130 14140 14150 14160 14170 14180
160 170 180 190 200 210
PEADRR AAGGTGTTAGTTTAACTAAATTGGCACCTCAATCCCACTTTGGTAACATAATAGTTTTTG
ref|NG CAGTATAAATCTATACTTTGCCAGCCATAGAAAAAGTTGATTTATGTTCTAGGTTAGAAT
14190 14200 14210 14220 14230 14240
>>ref|NG_053007.1| Homo sapiens inorganic (111994 nt)
rev-comp initn: 108 init1: 108 opt: 132 Z-score: 117.8 bits: 39.2 E(8960): 0.54
banded Smith-Waterman score: 132; 66.7% identity (66.7% similar) in 78 nt overlap (84-8:28071-28147)
110 100 90 80 70 60
PEADR- ATTCTTTCCATTGTAAAGTATGTCATGAAAATAAAAGACTAGGTTTTTGCATGGTTTATA
:: ::::::::: :::::: ::::::::
ref|NG TATGTTAAATCACTTCTCAAATGATTTGGGATGAAAGACTAGTTTTTTGGCTGGTTTATT
28050 28060 28070 28080 28090 28100
50 40 30 20 10
PEADR- TGGCTTTCTCTTGTTTGGAATTGCTGAACTTAAA-GCAAACAACATCACAAAAAC
: :: :::: : : :: :: ::: :::: :::::: :
ref|NG TCTAATT-GGTTGTAAACAGATACTTAAAAAAAATGCAATCAACATGAATCGTTAGAAAA
28110 28120 28130 28140 28150
ref|NG GTGTTGGCAGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGTGG
28160 28170 28180 28190 28200 28210
>>ref|NG_008979.1| Homo sapiens WD repeat d (45331 nt)
initn: 87 init1: 87 opt: 131 Z-score: 123.3 bits: 38.9 E(8960): 0.65
banded Smith-Waterman score: 131; 56.9% identity (56.9% similar) in 181 nt overlap (272-442:43295-43470)
250 260 270 280 290
PEADRR CTTCAAAACAAGTTGGAAGAGCACAAGGGTTTTATATTTATGATACCAAAAACACAT---
: ::::: ::::::: : :::::: :
ref|NG TGGGAGAGCTTTTGGTTTCATAGATTTTCATATATATATATGATATAATAAACACTTTTT
43270 43280 43290 43300 43310 43320
300 310 320 330 340 350
PEADRR -ACACTTCTTGGCTTAGTTTCACTTTTGTTCTTAATAGCACTCATCATCAAGGAACCATT
::: :::: :: ::::: ::::::::: :: :: : ::: : :: :
ref|NG GACA-TTCTGGG---AGTTTTACTTTTGTTACTATAAGGAAATATCCTTTTCTAATGCAT
43330 43340 43350 43360 43370 43380
360 370 380 390 400 410
PEADRR ACTTTTGCTGGAGCTGACCCAATTGTCGCCAAA--ACTAGA----GATATTTCTGTCACT
: : ::: : : :::: : ::: ::: : ::::: : :: :
ref|NG GTTATAATTGGTTGT-TTCTGTTTGTGGTAAAATGACTTAATTTTTATATTCCAATCCGT
43390 43400 43410 43420 43430
420 430 440 450 460 470
PEADRR GGTGGTACTGGAGATTTCTTTATGCATAGAGGAATTGCTACTATTACCACTGATGCCTTT
:: :::: ::: :::: : ::: ::
ref|NG CATGACACTGCAGAACCCTTTGTCAATACAGTCTTACTAGAAAATCCAAGAGAATTCTAT
43440 43450 43460 43470 43480 43490
480 490 500 510 520
PEADRR GAAGGCGAGGCTTATTTTCGACTTGGTGTTTATATCAAGTTCTTTGAGTGTTGGTAA
ref|NG CTTCTGCAATTGATGAGACTGTATTTCCTATGCAGTATTTGTGTACTTTGAAGTTTTTGT
43500 43510 43520 43530 43540 43550
>>ref|NG_047182.1| Homo sapiens solute car (133663 nt)
rev-comp initn: 104 init1: 104 opt: 130 Z-score: 113.4 bits: 38.6 E(8960): 0.79
banded Smith-Waterman score: 130; 70.4% identity (70.4% similar) in 71 nt overlap (388-320:53830-53898)
410 400 390 380 370
PEADR- TACCACCAGTGACAGAAATATCTCTAGTTTTGGCGACAAT-TGGGTC-AGCTCCAGCAAA
::: : :: : ::: :: : : :: :
ref|NG AGCCTCATTCTCCCCAGCTCCTGTTCAAGATGGAGTCACTCTGGTTCAAACGCCTCTGAC
53800 53810 53820 53830 53840 53850
360 350 340 330 320 310
PEADR- AGTAATGGTTCCTTGATGATGAGTGCTATTAAGAACAAAAGTGAAACTAAGCCAAGAAGT
:::: ::: :: ::::::: : :::::: ::::::::::
ref|NG AGTA--GGTCCCATGATGATAACTGCTATGGAGAACAAAAGCAGGGTAGGGAGGGAGTTG
53860 53870 53880 53890 53900 53910
300 290 280 270 260 250
PEADR- GTATGTGTTTTTGGTATCATAAATATAAAACCCTTGTGCTCTTCCAACTTGTTTTGAAGA
ref|NG GGGATGAGAGTAGTGCAATTGTAGAGTCCGGAAGGTGTCCTGGAAAAGGGAGCATTGAAC
53920 53930 53940 53950 53960 53970
>>ref|NG_013232.2| Homo sapiens fatty acid (209520 nt)
rev-comp initn: 140 init1: 82 opt: 130 Z-score: 119.7 bits: 38.6 E(8960): 0.79
banded Smith-Waterman score: 141; 61.6% identity (61.6% similar) in 138 nt overlap (171-48:196806-196942)
200 190 180 170 160 150
PEADR- TATGTTACCAAAGTGGGATTGAGGTGCCAATTTAGTTAAACTA-ACACCTTCTG-GAGCT
::::::: :: :: : :: : :: : :
ref|NG TGATTGCAGTTTCTTTTGCTAAAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATT
196780 196790 196800 196810 196820 196830
140 130 120 110 100
PEADR- GCTACTATTGCTGATGTTGCATTTGCTG-------CATTCTTTCCATTGTAAA---GTAT
:: ::: :: :::: :::: :: ::: : ::: ::: : : :::
ref|NG TTGGCTTTTGTTGTAATTGCTTTTGGTGTTTTAGACATGATGTCC-TTGCACATGCCTAT
196840 196850 196860 196870 196880 196890
90 80 70 60 50 40
PEADR- GTCATGAAAATAAAAGACTAGGTTT--TTGCATGGTTTATATGGCTTTCTCTTGTTTGGA
::: :::: :: : :::::::: :: : ::::: ::::: :::
ref|NG GTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTGTAACGTT
196900 196910 196920 196930 196940 196950
30 20 10
PEADR- ATTGCTGAACTTAAAGCAAACAACATCACAAAAAC
ref|NG TAAGTCTTTAATCCATCTTGAATTAATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTT
196960 196970 196980 196990 197000 197010
>>ref|NG_021169.1| Homo sapiens NME/NM23 nu (15531 nt)
rev-comp initn: 86 init1: 86 opt: 130 Z-score: 130.1 bits: 38.6 E(8960): 0.8
banded Smith-Waterman score: 130; 67.6% identity (67.6% similar) in 68 nt overlap (114-48:6034-6101)
140 130 120 110 100 90
PEADR- TGCTACTATTGCTGATGTTGCATTTGCTGCATTCTTTCCATTGTAAAGTATGTCATGAAA
::::::: ::::::::::: : ::: : :
ref|NG ACACCCCACCGTTTATTGGCTAGTCAAAATATTCTTTGCATTGTAAAGTGTAGCATAACA
6010 6020 6030 6040 6050 6060
80 70 60 50 40 30
PEADR- ATAAAAGACTAGGTTTTTGCATGGTTTAT-ATGGCTTTCTCTTGTTTGGAATTGCTGAAC
:: :::: : : :: :: : : :: ::: :::
ref|NG TTACAAGAATGGATTAATGGGTTGGGAATGCTGGGTTTTGGCCTTCATTCTGGTGCTGTG
6070 6080 6090 6100 6110 6120
20 10
PEADR- TTAAAGCAAACAACATCACAAAAAC
ref|NG GTCCTGTTTCCTCATTTGTAAAATGAAGGGGGTTGTAAAGATATATTCTCTAAAACCCCT
6130 6140 6150 6160 6170 6180
>>ref|NG_041938.1| Homo sapiens potassium v (474341 nt)
rev-comp initn: 151 init1: 87 opt: 129 Z-score: 111.0 bits: 38.4 E(8960): 0.95
banded Smith-Waterman score: 129; 63.7% identity (63.7% similar) in 102 nt overlap (144-48:271722-271820)
170 160 150 140 130 120
PEADR- CAATTTAGTTAAACTAACACCTTCTGGAGCTGCTACTATTGCTGATGTTGCATTTG--CT
:: : : :::::: :: :: :: : :
ref|NG AATTAGATCCCATTTGTCAATTTTGTCTTTTGTTGCCATTGCTTTTGGTGTTTTAGACAT
271700 271710 271720 271730 271740 271750
110 100 90 80 70
PEADR- GCA-TTCTTTCCATTGTAAAGTATGTCATGAAAATAAAAGACTAGGTTT--TTGCATGGT
: : : ::: :: :: ::::::: :::: :: : :::::::: :: : :::
ref|NG GAAGTCCTTGCCCATG---CGTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGT
271760 271770 271780 271790 271800
60 50 40 30 20 10
PEADR- TTATATGGCTTTCTCTTGTTTGGAATTGCTGAACTTAAAGCAAACAACATCACAAAAAC
:: :::: :::
ref|NG TTTTATGATTTTAGGTCTAACGTTTAAGTCTTTAATCTATCTTGAATTGATTTTTGTATA
271810 271820 271830 271840 271850 271860
>>ref|NG_047156.1| Homo sapiens contactin (1344910 nt)
rev-comp initn: 152 init1: 89 opt: 129 Z-score: 111.0 bits: 38.4 E(8960): 0.95
banded Smith-Waterman score: 129; 56.8% identity (56.8% similar) in 192 nt overlap (184-2:835678-835865)
210 200 190 180 170 160
PEADR- CATCAAAAACTATTATGTTACCAAAGTGGGATTGA-GGTGCCAATTT--AGTTAAACTAA
::::: :: :: :: : : :: ::: :
ref|NG AAAAATACCTTTATATGCAATTCTTGGTAAATTGATAGTTCCTATCTAAATTTGAACATA
835650 835660 835670 835680 835690 835700
150 140 130 120 110
PEADR- CACCTTCT-GGAGCTGCTACTATTGCTGATGTTGCATTTGCTGCATT-CTTTCCATTGTA
: ::: : : :: :: : : ::: : :: : : :::: ::: : :::
ref|NG CTGCTTTTCAGCGCATTTAGTGATTTAGATCCAGAATAT--TCCATTAGTTTTCCTTG--
835710 835720 835730 835740 835750 835760
100 90 80 70 60 50
PEADR- AAGTATGTCATGAAAATAAAAGACTAGGTTTTTGCATGGTTTATATGGCTTTCTCTTGTT
::: : : :: ::::::: ::: : :: : : ::::::: :::: : ::
ref|NG AAGCAGTTGATTAAAATAACCTACTTAACTCTTTGAGAGATTATATGACTTTTTAGGCTT
835770 835780 835790 835800 835810 835820
40 30 20 10
PEADR- TGGAATT----GCTGAACTTAAAGCAAACAACATCACAAAAAC
:::: :: :: : :: :: : :: ::: : :::
ref|NG TGGATTTAAGCCCTTTAATTTAACCTTTCATTTTCATATAAAACTCAAAAATTACTTCTC
835830 835840 835850 835860 835870 835880
ref|NG TGGCTTTTTTCATAACTTTTTCTCCTAAGGTAAAATTGACCTTAGAGTTTAAAACCACAT
835890 835900 835910 835920 835930 835940
>>ref|NG_051313.1| Homo sapiens myelin tra (549276 nt)
rev-comp initn: 106 init1: 106 opt: 129 Z-score: 111.0 bits: 38.4 E(8960): 0.95
banded Smith-Waterman score: 129; 62.4% identity (62.4% similar) in 117 nt overlap (118-9:285939-286051)
140 130 120 110 100
PEADR- GAGCTGCTACTATTGCTGATGTTGCATTTGCTGCATTC--TTTCCATTGTAAAGTATGTC
:::::: : ::::::: ::::: ::::
ref|NG TGAACCAGAGCCCAAAGAGAAAATCACACTCTGCATCCAATTTCCATGCTAAAGACTGTC
285910 285920 285930 285940 285950 285960
90 80 70 60 50 40
PEADR- ATGAAAATAAAA-GACTAGGTTTTTGC--ATGGTTTATATGGCTTTCTCTTGTTTGGAAT
: ::::::::: : :: : ::: : : :: ::: :: :::: ::::
ref|NG CTTAAAATAAAATCAATATCTGTTTCCCGAAAAACTACATGAATT----GTGTTCTGAAT
285970 285980 285990 286000 286010 286020
30 20 10
PEADR- --TGCTGAACTTAAAGCAAACAACATCACAAAAAC
:: : :::::: ::: : :::
ref|NG GGTGACTATTTTAAAGAAAAGCATATCGTGTCCAGAAGGAGAAATCTGCTGAAATAGCTC
286030 286040 286050 286060 286070 286080
>>ref|NG_016991.1| Homo sapiens solute carr (233442 nt)
rev-comp initn: 105 init1: 105 opt: 129 Z-score: 111.0 bits: 38.4 E(8960): 0.95
banded Smith-Waterman score: 129; 58.7% identity (58.7% similar) in 138 nt overlap (307-172:62053-62185)
330 320 310 300 290 280
PEADR- TGCTATTAAGAACAAAAGTGAAACTAAGCCAAGAAGTGTATGTGTTTTTGGTATCATAAA
: ::: : : : : ::::::: :::::::
ref|NG AAAACAGGTTTTGGAGGCATTTGGTTTTTGATGAATTCTGTATATTTTTGGCTTCATAAA
62030 62040 62050 62060 62070 62080
270 260 250 240 230
PEADR- TAT--AAAACCCTTGTGCTCTTCCAACTTGTTTTGAAGAAAGGCTATGGCTTAATGTGAT
:: ::: : ::: : :::: :: ::::::: : ::: :: :: :: ::
ref|NG AATTAAAATCTCTTTTCCTCT--CATATTGTTTTTCTG-AAGTAGATTATTT--TGGGAA
62090 62100 62110 62120 62130
220 210 200 190 180 170
PEADR- AGGGTCATCAAAAACTATTATGTTACCAAAGTGGGATTGAGGTGCCAATTTAGTTAAACT
: :: : : : : : : :: ::: :: :: :: : : ::
ref|NG AATGTAAACTGAGATTTTAGAATTGGAAAACTGCCCTTTAGTTACTAACATTCTGGATTT
62140 62150 62160 62170 62180 62190
160 150 140 130 120 110
PEADR- AACACCTTCTGGAGCTGCTACTATTGCTGATGTTGCATTTGCTGCATTCTTTCCATTGTA
ref|NG TTGCTTGGAGGCAGGTGAAGAAAGTGATTTTAGTATTCCTTCAGCCAAACAAATGTGTTT
62200 62210 62220 62230 62240 62250
>>ref|NG_032814.2| Homo sapiens arylsulfat (199912 nt)
initn: 104 init1: 104 opt: 129 Z-score: 111.0 bits: 38.4 E(8960): 0.95
banded Smith-Waterman score: 129; 68.2% identity (68.2% similar) in 66 nt overlap (30-95:130432-130496)
10 20 30 40 50
PEADRR GTTTTTGTGATGTTGTTTGCTTTAAGTTCAGCAATTCCAAACAAGAGAAAGCCATATAA
::::: : :::::: : ::::::::: ::
ref|NG AGAACAACTCATGAATTCAAGGAAAAACAAAGCAAAGCAAAACAAAATAAAGCCATAAAA
130410 130420 130430 130440 130450 130460
60 70 80 90 100 110
PEADRR ACCATGCAAAAACCTAGTCTTTTATTTTCATGACATACTTTACAATGGAAAGAATGCAGC
:::::: : : : :::: :: :: : : ::
ref|NG TCCATGC-CAGATCGGTTCTTGGATGTTGAGCAGATCAAATAGCTGCAGAAGTTTCCTTC
130470 130480 130490 130500 130510 130520
120 130 140 150 160 170
PEADRR AAATGCAACATCAGCAATAGTAGCAGCTCCAGAAGGTGTTAGTTTAACTAAATTGGCACC
ref|NG TTTCTCTCTTCTTTAATAGTTGTATTTCTTCATCCTAAACAGACAGTCACATTATGATCA
130530 130540 130550 130560 130570 130580
>>ref|NG_042061.1| Homo sapiens thioredoxin (68069 nt)
initn: 144 init1: 82 opt: 129 Z-score: 117.1 bits: 38.4 E(8960): 0.96
banded Smith-Waterman score: 130; 59.9% identity (59.9% similar) in 137 nt overlap (48-171:22443-22579)
20 30 40 50 60 70
PEADRR TGCTTTAAGTTCAGCAATTCCAAACAAGAGAAAGCCATATAAACCATGCA--AAAACCTA
::: ::::: ::::: : : ::::::::
ref|NG AGATGGATTAAAGACTTAAAAGTTAGACCTAAAACCATAAAAACCCTAGAAGAAAACCTA
22420 22430 22440 22450 22460 22470
80 90 100 110 120
PEADRR GTCTTTTATTTTCATGACATA--CTTTACAATGGAAAGAATG-------CAGCAAATGCA
: : :: :::: :::::: : : : ::: ::: :: :::: :::
ref|NG GGCATTACCATTCAGGACATAGGCATGGGCAAGGACTTCATGTCTAAAACACCAAAAGCA
22480 22490 22500 22510 22520 22530
130 140 150 160 170 180
PEADRR ACATCAGCAATAG-TAGCAGCTCCAGAAGGTGT-TAGTTTAACTAAATTGGCACCTCAAT
: :: ::: :: : : :: : :: : :: :: :::::::
ref|NG ATGGCAACAAAAGCCAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCGCA
22540 22550 22560 22570 22580 22590
190 200 210 220 230 240
PEADRR CCCACTTTGGTAACATAATAGTTTTTGATGACCCTATCACATTAAGCCATAGCCTTTCTT
ref|NG GCAAAAGAAACTACCATCAGAGTGAACAGGCAGCCTACAAAATGGGAGAAAATTTTCGCA
22600 22610 22620 22630 22640 22650
>>ref|NG_051648.1| Homo sapiens chromosome (57779 nt)
rev-comp initn: 87 init1: 87 opt: 129 Z-score: 118.4 bits: 38.4 E(8960): 0.96
banded Smith-Waterman score: 129; 63.7% identity (63.7% similar) in 102 nt overlap (144-48:29635-29733)
170 160 150 140 130 120
PEADR- CAATTTAGTTAAACTAACACCTTCTGGAGCTGCTACTATTGCTGATGTTGCATTTG--CT
:: : : :::::: :: :: :: : :
ref|NG AATTAGATCCCATTTGTCAATTTTGGCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACAT
29610 29620 29630 29640 29650 29660
110 100 90 80 70
PEADR- GCA-TTCTTTCCATTGTAAAGTATGTCATGAAAATAAAAGACTAGG--TTTTTGCATGGT
: : : ::: :: :: :::::: :::: :: : ::::: ::::: : :::
ref|NG GAAGTCCTTGCCCATG---CCTATGTCCTGAATGGTAATGCCTAGGTTTTTTTCTAGGGT
29670 29680 29690 29700 29710 29720
60 50 40 30 20 10
PEADR- TTATATGGCTTTCTCTTGTTTGGAATTGCTGAACTTAAAGCAAACAACATCACAAAAAC
:: ::::: :::
ref|NG TTTTATGGTTTTAGGTCTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTATATA
29730 29740 29750 29760 29770 29780
>>ref|NG_013023.1| Homo sapiens multiple in (55946 nt)
rev-comp initn: 142 init1: 82 opt: 129 Z-score: 118.7 bits: 38.4 E(8960): 0.96
banded Smith-Waterman score: 130; 59.9% identity (59.9% similar) in 137 nt overlap (171-48:27075-27211)
200 190 180 170 160 150
PEADR- TATGTTACCAAAGTGGGATTGAGGTGCCAATTTAGTTAAACTA-ACACCTTCTG-GAGCT
::::::: :: :: : :: : :: : :
ref|NG ATGGTAGGTTCTTTTGCCGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATT
27050 27060 27070 27080 27090 27100
140 130 120 110 100
PEADR- GCTACTATTGCTGATGTTGCATTTGCTG-------CATTCTTTCCATTGTAAAG--TATG
:: ::: :: :::: :::: :: ::: ::: : : : ::::
ref|NG TTGGCTTTTGTTGCCATTGCTTTTGGTGTTTTAATCATGAAGTCCTTGCCCATGCCTATG
27110 27120 27130 27140 27150 27160
90 80 70 60 50 40
PEADR- TCATGAAAATAAAAGACTAGGTTT--TTGCATGGTTTATATGGCTTTCTCTTGTTTGGAA
:: :::: : : : :::::::: :: : ::::: ::::: :::
ref|NG TCCTGAATAGTACTGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAAGTCTAACTTTT
27170 27180 27190 27200 27210 27220
30 20 10
PEADR- TTGCTGAACTTAAAGCAAACAACATCACAAAAAC
ref|NG AAGTCTTTAACCCATCTTGAATTAATTTTTGTATAAGGTGTGAGGAAGGGATCCAGTTTC
27230 27240 27250 27260 27270 27280
>>ref|NG_008448.1| Homo sapiens peroxisomal (36412 nt)
initn: 139 init1: 82 opt: 129 Z-score: 122.0 bits: 38.4 E(8960): 0.96
banded Smith-Waterman score: 130; 59.9% identity (59.9% similar) in 137 nt overlap (48-171:29446-29582)
20 30 40 50 60 70
PEADRR TGCTTTAAGTTCAGCAATTCCAAACAAGAGAAAGCCATATAAACCATGCA--AAAACCTA
::: ::::: ::::: : : ::::::::
ref|NG AGATGGATTAAAGACTTACATGTTAGACCTAAAACCATAAAAACCCTAGAAGAAAACCTA
29420 29430 29440 29450 29460 29470
80 90 100 110 120
PEADRR GTCTTTTATTTTCATGACATA--CTTTACAATGGAAAGAATG-------CAGCAAATGCA
: : :: :::: :::::: : : : ::: ::: :: :::: :::
ref|NG GGCATTACCATTCAGGACATAGGCATGGGCAAGGACTTCATGTCTAAAACACCAAAAGCA
29480 29490 29500 29510 29520 29530
130 140 150 160 170 180
PEADRR ACATCAGCAATAG-TAGCAGCTCCAGAAGGTGT-TAGTTTAACTAAATTGGCACCTCAAT
: :: ::: :: : : :: : :: : :: :: :::::::
ref|NG ATGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACA
29540 29550 29560 29570 29580 29590
190 200 210 220 230 240
PEADRR CCCACTTTGGTAACATAATAGTTTTTGATGACCCTATCACATTAAGCCATAGCCTTTCTT
ref|NG GCAAAAGAAACTACCAACAGAGTGAACAGGCAACCTACAAAATGGGAGAAAATTTTCGCA
29600 29610 29620 29630 29640 29650
>>ref|NG_029017.2| Homo sapiens ATPase fami (185403 nt)
rev-comp initn: 134 init1: 78 opt: 129 Z-score: 122.2 bits: 38.4 E(8960): 0.96
banded Smith-Waterman score: 129; 59.3% identity (59.3% similar) in 177 nt overlap (254-87:154389-154556)
280 270 260 250 240 230
PEADR- TCATAAATATAAAACCCTTGTGCTCTTCCAACTTGTTTTGAAGAAAGGCTATGGCTTAAT
::: :::::: :::: : : : ::::
ref|NG GCCTATTCATATGCTATATACCATCATTTGACTAGTTTTGCTGAAA-TTTTCGCCCTAAT
154360 154370 154380 154390 154400 154410
220 210 200 190 180
PEADR- GTGATAGGGTCATCAAAAACTATTATGTT-ACCAAAGTG----GGATTGAGGTGCCAATT
:: ::: :::::: :: :::::: :::: :: ::::: : : ::
ref|NG GTTTTAGTTGTCTCAAAATCTTCTATGTTGTTCAAATTGTATAGGATTAAAGCCCC----
154420 154430 154440 154450 154460 154470
170 160 150 140 130 120
PEADR- TAGTTAAACTAACACCTTCTGGAG--CTGCTACTATTGCTGATGTTGCATTTGCTGCATT
:: : :: : : ::: ::::: :: : ::::: : : ::::: :: :::
ref|NG CAGATTCACCCA-AACTTTTGGAGCCCTCTGTGTTTTGCTCTTAATACATTT-CTAAATT
154480 154490 154500 154510 154520 154530
110 100 90 80 70 60
PEADR- --CTTTCCATTGTAAAGTATGTCATGAAAATAAAAGACTAGGTTTTTGCATGGTTTATAT
: ::: :: :::: ::::::
ref|NG TATCTGCCACAGT--TGTATTTCATGAGTTGTTTCAACCAAACTCACTCATTTTTCTGTT
154540 154550 154560 154570 154580
>>ref|NG_023250.3| Homo sapiens histone de (922468 nt)
rev-comp initn: 82 init1: 82 opt: 129 Z-score: 125.4 bits: 38.3 E(8960): 0.96
banded Smith-Waterman score: 130; 59.9% identity (59.9% similar) in 137 nt overlap (171-48:904117-904253)
200 190 180 170 160 150
PEADR- TATGTTACCAAAGTGGGATTGAGGTGCCAATTTAGTTAAACTA-ACACCTTCTG-GAGCT
::::::: :: :: : :: : :: : :
ref|NG ATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATT
904090 904100 904110 904120 904130 904140
140 130 120 110 100
PEADR- GCTACTATTGCTGATGTTGCATTTGCTG-------CATTCTTTCCATTGTAAAG--TATG
:: ::: :: :::: :::: :: ::: ::: : : : ::::
ref|NG TTGGCTTTTGTTGCCATTGCTTTTGGTGTTTTAGACATGAAGTCCTTGCCCATGCCTATG
904150 904160 904170 904180 904190 904200
90 80 70 60 50 40
PEADR- TCATGAAAATAAAAGACTAGGTTT--TTGCATGGTTTATATGGCTTTCTCTTGTTTGGAA
:: :::: :: : :::::::: :: : ::::: ::::: :::
ref|NG TCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTCTAACGTTT
904210 904220 904230 904240 904250 904260
30 20 10
PEADR- TTGCTGAACTTAAAGCAAACAACATCACAAAAAC
ref|NG AAGTCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTC
904270 904280 904290 904300 904310 904320
>>ref|NG_011718.1| Homo sapiens alcohol deh (23269 nt)
initn: 82 init1: 82 opt: 129 Z-score: 125.5 bits: 38.3 E(8960): 0.96
banded Smith-Waterman score: 129; 63.7% identity (63.7% similar) in 102 nt overlap (48-144:8503-8601)
20 30 40 50 60 70
PEADRR TGCTTTAAGTTCAGCAATTCCAAACAAGAGAAAGCCATATAAACCATGCA--AAAACCTA
::: ::::: ::::: : : ::::::::
ref|NG AGATGGATTAAAGACTTAAACGTTAGACCTAAAACCATAAAAACCCTAGAAGAAAACCTA
8480 8490 8500 8510 8520 8530
80 90 100 110 120 130
PEADRR GTCTTTTATTTTCATGACATACTTTACAATGG-AAAGAATGCA--GCAAATGCAACATCA
: : :: :::: :::::: :: :: :: :: : :: : :: :: :: :
ref|NG GGCATTACCATTCAGGACATA---GGCATGGGCAAGGACTTCATGTCTAAAACACCAAAA
8540 8550 8560 8570 8580
140 150 160 170 180 190
PEADRR GCAATAGTAGCAGCTCCAGAAGGTGTTAGTTTAACTAAATTGGCACCTCAATCCCACTTT
::::: : : ::
ref|NG GCAATGGCAACAAAAGCCAAAATTGACAAATGGGATCTAATTAAACTCAAGAGCTTCTGC
8590 8600 8610 8620 8630 8640
>>ref|NG_028255.1| Homo sapiens thymidylate (22896 nt)
rev-comp initn: 82 init1: 82 opt: 129 Z-score: 125.6 bits: 38.3 E(8960): 0.96
banded Smith-Waterman score: 130; 59.9% identity (59.9% similar) in 137 nt overlap (171-48:10908-11044)
200 190 180 170 160 150
PEADR- TATGTTACCAAAGTGGGATTGAGGTGCCAATTTAGTTAAACTA-ACACCTTCTG-GAGCT
::::::: :: :: : :: : :: : :
ref|NG ATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATT
10880 10890 10900 10910 10920 10930
140 130 120 110 100
PEADR- GCTACTATTGCTGATGTTGCATTTGCTG-------CATTCTTTCCATTGTAAAG--TATG
:: ::: :: :::: :::: :: ::: ::: : : : ::::
ref|NG TTGTCTTTTGTTGCCATTGCTTTTGGTGTTTTAGACATGAAGTCCTTGCCCATGCCTATG
10940 10950 10960 10970 10980 10990
90 80 70 60 50 40
PEADR- TCATGAAAATAAAAGACTAGGTTT--TTGCATGGTTTATATGGCTTTCTCTTGTTTGGAA
:: :::: :: : :::::::: :: : ::::: ::::: :::
ref|NG TCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTCTAACGTTT
11000 11010 11020 11030 11040 11050
30 20 10
PEADR- TTGCTGAACTTAAAGCAAACAACATCACAAAAAC
ref|NG AAGTCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTC
11060 11070 11080 11090 11100 11110
>>ref|NG_030033.1| Homo sapiens phosphodies (321863 nt)
initn: 82 init1: 82 opt: 129 Z-score: 125.9 bits: 38.3 E(8960): 0.96
banded Smith-Waterman score: 130; 59.9% identity (59.9% similar) in 137 nt overlap (48-171:308487-308623)
20 30 40 50 60 70
PEADRR TGCTTTAAGTTCAGCAATTCCAAACAAGAGAAAGCCATATAAACCATGCA--AAAACCTA
::: ::::: ::::: : : ::::::::
ref|NG AGATGGATTAAAGACTTAAACGTTAGACCTAAAACCATAAAAACCCTAGAAGAAAACCTA
308460 308470 308480 308490 308500 308510
80 90 100 110 120
PEADRR GTCTTTTATTTTCATGACATA--CTTTACAATGGAAAGAATG-------CAGCAAATGCA
: : :: :::: :::::: : : : ::: ::: :: :::: :::
ref|NG GGCATTACCATTCAGGACATAGGCATGGGCAAGGACTTCATGTCTAAAACACCAAAAGCA
308520 308530 308540 308550 308560 308570
130 140 150 160 170 180
PEADRR ACATCAGCAATAG-TAGCAGCTCCAGAAGGTGT-TAGTTTAACTAAATTGGCACCTCAAT
: :: ::: :: : : :: : :: : :: :: :::::::
ref|NG ATGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACA
308580 308590 308600 308610 308620 308630
190 200 210 220 230 240
PEADRR CCCACTTTGGTAACATAATAGTTTTTGATGACCCTATCACATTAAGCCATAGCCTTTCTT
ref|NG GCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAAAATGGGAGAAAATTTTCACA
308640 308650 308660 308670 308680 308690
>>ref|NG_033986.1| Homo sapiens ectonucleot (18829 nt)
rev-comp initn: 82 init1: 82 opt: 129 Z-score: 127.1 bits: 38.3 E(8960): 0.96
banded Smith-Waterman score: 132; 60.9% identity (60.9% similar) in 138 nt overlap (171-48:11897-12033)
200 190 180 170 160 150
PEADR- TATGTTACCAAAGTGGGATTGAGGTGCCAATTTAGTTAAACTA-ACACCTTCTG-GAGCT
::::::: :: :: : :: : :: : :
ref|NG ATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATT
11870 11880 11890 11900 11910 11920
140 130 120 110 100
PEADR- GCTACTATTGCTGATGTTGCATTTGCTG-------CATTCTTTCCATTGTAAA---GTAT
:: ::: :: :::: :::: :: ::: ::: :::: : :::
ref|NG TTGGCTTTTGTTGCCATTGCTTTTGGTGTTTTAGACATGAAGTCC-TTGTCCATGCCTAT
11930 11940 11950 11960 11970 11980
90 80 70 60 50 40
PEADR- GTCATGAAAATAAAAGACTAGGTTT--TTGCATGGTTTATATGGCTTTCTCTTGTTTGGA
::: :::: :: : :::::::: :: : ::::: ::::: :::
ref|NG GTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTCTAGCGTT
11990 12000 12010 12020 12030 12040
30 20 10
PEADR- ATTGCTGAACTTAAAGCAAACAACATCACAAAAAC
ref|NG TAAGTCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTT
12050 12060 12070 12080 12090 12100
>>ref|NG_012806.1| Homo sapiens trophinin ( (17616 nt)
initn: 82 init1: 82 opt: 129 Z-score: 127.6 bits: 38.3 E(8960): 0.96
banded Smith-Waterman score: 133; 59.1% identity (59.1% similar) in 137 nt overlap (48-171:2801-2937)
20 30 40 50 60 70
PEADRR TGCTTTAAGTTCAGCAATTCCAAACAAGAGAAAGCCATATAAACCATGCA--AAAACCTA
::: ::::: ::::: : : ::::::::
ref|NG AGATGGATGAAAGACTTAAACGTTAGACCTAAAACCATAAAAACCCTAGAAGAAAACCTA
2780 2790 2800 2810 2820 2830
80 90 100 110 120
PEADRR GTCTTTTATTTTCATGACATA--CTTTACAATGGAAAGAATG-------CAGCAAATGCA
: : :: :::: :::::: : : : ::: ::: :: :::: :::
ref|NG GGCATTACCATTCAGGACATAGGCATGGGCAAGGACTTCATGTCTAAAACACCAAAAGCA
2840 2850 2860 2870 2880 2890
130 140 150 160 170 180
PEADRR ACATCAGCAATAGTAGCAGCT--CCAGAAGGTGTTAGTTTAACTAAATTGGCACCTCAAT
: :: ::: :: : : : :: :: :: ::::::: ::
ref|NG ATGGCAACAAAAGCCAAAATTGACAAGTGGGATCTAATTTAACTCAAGAGCTTCTGCACA
2900 2910 2920 2930 2940 2950
190 200 210 220 230 240
PEADRR CCCACTTTGGTAACATAATAGTTTTTGATGACCCTATCACATTAAGCCATAGCCTTTCTT
ref|NG GCAAAAGAAACTACCATCAGAGTGAACAGGCAACTTACAGACTGGGAGAAAATTTTTGCA
2960 2970 2980 2990 3000 3010
>>ref|NG_029728.1| Homo sapiens protein kin (167437 nt)
rev-comp initn: 134 init1: 82 opt: 129 Z-score: 127.6 bits: 38.3 E(8960): 0.96
banded Smith-Waterman score: 131; 59.1% identity (59.1% similar) in 154 nt overlap (183-48:156849-157002)
210 200 190 180 170 160
PEADR- ATCAAAAACTATTATGTTACCAAAGTGGGATTGAGGTGC-----CAATTTAGTTAAACTA
:::: :::: : ::::::: :: ::
ref|NG GTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGATGTGCAGAAGCTCTTTAGTTTAATTA
156820 156830 156840 156850 156860 156870
150 140 130 120 110
PEADR- -ACACCTTCTG-GAGCTGCTACTATTGCTGATGTTGCATTTGCTG-------CATTCTTT
: :: : :: : : :: ::: :: :::: :::: :: ::: :
ref|NG GATCCCATTTGTCAATTTTGGCTTTTGTTGCCATTGCTTTTGGTGTTTTAGACATGAAGT
156880 156890 156900 156910 156920 156930
100 90 80 70 60
PEADR- CCATTGTAAAG--TATGTCATGAAAATAAAAGACTAGGTTT--TTGCATGGTTTATATGG
:: : : : :::::: :::: :: : :::::::: :: : ::::: :::::
ref|NG CCTTGCCCATGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGG
156940 156950 156960 156970 156980 156990
50 40 30 20 10
PEADR- CTTTCTCTTGTTTGGAATTGCTGAACTTAAAGCAAACAACATCACAAAAAC
:::
ref|NG TTTTAGGTCTAACGTTTAAGTCTTTAACCCATCTTGAATTGATTTTTGTATAAGGTGTAA
157000 157010 157020 157030 157040 157050
>>ref|NG_046978.1| Homo sapiens Charcot-Le (13777 nt)
rev-comp initn: 82 init1: 82 opt: 129 Z-score: 129.5 bits: 38.3 E(8960): 0.96
banded Smith-Waterman score: 132; 60.9% identity (60.9% similar) in 138 nt overlap (171-48:10087-10223)
200 190 180 170 160 150
PEADR- TATGTTACCAAAGTGGGATTGAGGTGCCAATTTAGTTAAACTA-ACACCTTCTG-GAGCT
::::::: :: :: : :: : :: : :
ref|NG ATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATT
10060 10070 10080 10090 10100 10110
140 130 120 110 100
PEADR- GCTACTATTGCTGATGTTGCATTTGCTG-------CATTCTTTCCATTGTAAAG---TAT
:: ::: :: :::: :::: :: ::: ::: ::: :: :::
ref|NG TTGTCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCC-TTGCCCAGGCCTAT
10120 10130 10140 10150 10160 10170
90 80 70 60 50 40
PEADR- GTCATGAAAATAAAAGACTAGGTTT--TTGCATGGTTTATATGGCTTTCTCTTGTTTGGA
::: :::: :: : :::::::: :: : ::::: ::::: :::
ref|NG GTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTCTAACGTT
10180 10190 10200 10210 10220 10230
30 20 10
PEADR- ATTGCTGAACTTAAAGCAAACAACATCACAAAAAC
ref|NG TACCGTCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGG
10240 10250 10260 10270 10280 10290
>>ref|NG_053016.1| Homo sapiens LRR bindin (131192 nt)
rev-comp initn: 128 init1: 128 opt: 128 Z-score: 110.6 bits: 38.1 E(8960): 1.2
banded Smith-Waterman score: 128; 69.0% identity (69.0% similar) in 58 nt overlap (121-64:7073-7130)
150 140 130 120 110 100
PEADR- CTGGAGCTGCTACTATTGCTGATGTTGCATTTGCTGCATTCTTTCCATTGTAAAGTATGT
:::::: :: :: ::: :: ::: :::
ref|NG GAAGTGTTGTATTATGTTTTGTTAGGTCTGTTGCTGGATATTTATCATCGTGAAGAATGG
7050 7060 7070 7080 7090 7100
90 80 70 60 50 40
PEADR- CATGAAAATAAAAGACTAGGTTTTTGCATGGTTTATATGGCTTTCTCTTGTTTGGAATTG
: ::::::::: : :: ::::::
ref|NG TAATGAAATAAAAGTTGAAGTATTTGCAGAATGCTGGAATTTAGAATAGTTTGTTGGTTT
7110 7120 7130 7140 7150 7160
>>ref|NG_042180.1| Homo sapiens leucine ric (1132730 nt)
initn: 102 init1: 102 opt: 127 Z-score: 108.0 bits: 37.8 E(8960): 1.4
banded Smith-Waterman score: 127; 69.6% identity (69.6% similar) in 56 nt overlap (271-326:324829-324884)
250 260 270 280 290 300
PEADRR TCTTCAAAACAAGTTGGAAGAGCACAAGGGTTTTATATTTATGATACCAAAAACACATAC
::: : : : : : : ::::: :: :
ref|NG GACACAAATATTTGGGATAAATTTAAATAATTTCAGTTATCTTACATCAAAATAACTTTG
324800 324810 324820 324830 324840 324850
310 320 330 340 350 360
PEADRR ACTTCTTGGCTTAGTTTCACTTTTGTTCTTAATAGCACTCATCATCAAGGAACCATTACT
::::::::: ::::::: ::::::
ref|NG TTTTCTTGGCTGAGTTTCAGTTTTGTCATCCGTAAAATGAGAATAATAATTGTATCTACC
324860 324870 324880 324890 324900 324910
>>ref|NG_030342.1| Homo sapiens collectin s (188375 nt)
rev-comp initn: 158 init1: 92 opt: 127 Z-score: 108.0 bits: 37.8 E(8960): 1.4
banded Smith-Waterman score: 127; 58.9% identity (58.9% similar) in 107 nt overlap (136-33:93504-93610)
160 150 140 130 120 110
PEADR- TTAAACTAACACCTTCTGGAGCTGCTACTATTGCTGATGTTGCATTTGCTGCATTCTTTC
:: : :: :::: : : : : :::
ref|NG CAAATTGTCTTTCCAATATAAGTAAGGTGTTTTTTTATCTTGCTGCTTTTAAAATGTTTT
93480 93490 93500 93510 93520 93530
100 90 80 70 60
PEADR- CATTGTAAAGTATGTCATGAAAATAAAAGACTAGGTTTTTGCATG---GTTTATATGGCT
: :::: : : : ::: : :: : : :: : : ::: ::: : :::::
ref|NG CTTTGTCCTTTGTTTTTGGAAGTTTAATTAGGATGTGTCTTGATGTGTATTTTTTTGGCT
93540 93550 93560 93570 93580 93590
50 40 30 20 10
PEADR- TTCTCTTGTTTGGAATTGCTGAACTTAAAGCAAACAACATCACAAAAAC
:: :: :::::::::::
ref|NG TTATCCTGTTTGGAATTCACTCATCATCTGAATATGTAGGTTCATTTCTCTTGCCAAATT
93600 93610 93620 93630 93640 93650
>>ref|NG_033954.1| Homo sapiens maltase-glu (117869 nt)
initn: 92 init1: 92 opt: 127 Z-score: 109.9 bits: 37.8 E(8960): 1.4
banded Smith-Waterman score: 127; 68.9% identity (68.9% similar) in 74 nt overlap (254-327:35280-35348)
230 240 250 260 270 280
PEADRR CATTAAGCCATAGCCTTTCTTCAAAACAAGTTGGAAGAGCACAAGGGTTTTATATTTATG
:::: : : : ::::::::: :::::::
ref|NG AGGTAATGACACAACTTTTAAGAATGGTGATTGGCACA-TAGAAGGGTTTTGAATTTATG
35250 35260 35270 35280 35290 35300
290 300 310 320 330 340
PEADRR ATACCAAAAACACATACACTTCTTGGCTTAGTTTCACTTTTGTTCTTAATAGCACTCATC
:::: :: : :: :: :: ::::::: ::::::::
ref|NG ATAC---AATTTCTGAC-TTTTTTTTTTTAGTTTGGCTTTTGTTTGAGGTGAGATTCACT
35310 35320 35330 35340 35350 35360
350 360 370 380 390 400
PEADRR ATCAAGGAACCATTACTTTTGCTGGAGCTGACCCAATTGTCGCCAAAACTAGAGATATTT
ref|NG GAGGTTAGTTACCTCCATGTCTAGTTGAATTATATTCTCACAATAATGACGGGGTATGTG
35370 35380 35390 35400 35410 35420
>>ref|NG_047115.1| Homo sapiens ATP bindin (105077 nt)
initn: 161 init1: 91 opt: 127 Z-score: 110.8 bits: 37.8 E(8960): 1.4
banded Smith-Waterman score: 127; 59.3% identity (59.3% similar) in 113 nt overlap (267-374:101867-101979)
240 250 260 270 280 290
PEADRR CCTTTCTTCAAAACAAGTTGGAAGAGCACAAGGGTTTTATATTTATGATACCA-AAAACA
:: :: ::: :: :: :: : :
ref|NG CGGATTGGCTTGTGTGTTTCACTTTTAGGGAGAGTCATATTTTGATTATTGTATTTATTC
101840 101850 101860 101870 101880 101890
300 310 320 330 340 350
PEADRR CATACACTTCTTGGCTTAGTTTCACTTTTGTTCTTAATAGCACTC----ATCATCAAGGA
:::: : : : : : ::: ::::::::::::: :::::: : ::: :::
ref|NG CATATTCATGTAAACAAAATTTAGTTTTTGTTCTTAATTGCACTCTAAAAGGTTCAGGGA
101900 101910 101920 101930 101940 101950
360 370 380 390 400 410
PEADRR ACCATTACTTTTGCTGGAGCTGACCCAATTGTCGCCAAAACTAGAGATATTTCTGTCACT
::: ::: : : :: : : ::
ref|NG ACCGTTATTATAATTGTATCAGAGGCCTATAATGAAGCTTTATACGTGTAGCTATATCTA
101960 101970 101980 101990 102000 102010
>>ref|NG_023234.1| Homo sapiens CD82 molecu (61199 nt)
rev-comp initn: 102 init1: 102 opt: 127 Z-score: 115.0 bits: 37.8 E(8960): 1.4
banded Smith-Waterman score: 127; 64.0% identity (64.0% similar) in 86 nt overlap (183-99:11380-11464)
210 200 190 180 170 160
PEADR- ATCAAAAACTATTATGTTACCAAAGTGGGATTGAGGTGCCAATTTAGTTAAACTA-ACAC
::: ::: : :: : ::: :: : :
ref|NG CCTGGGCTCCGTTCCCAGCTCATCTTTTACTTGCTGTGTTATCTTGGGTAAGTTATAGCC
11350 11360 11370 11380 11390 11400
150 140 130 120 110 100
PEADR- CTTCTGGAGCTGCTACTATTGCTGATGTTGCATTTGCTGCATTCTTTCCATTGTAAAGTA
::::: : ::: : : : : :: :::::::::::::: : : : ::::::
ref|NG CTTCTTGGGCTACAAAACTATATTATCTTGCATTTGCTGCACT-TGGCTTTTGTAAGTGA
11410 11420 11430 11440 11450 11460
90 80 70 60 50 40
PEADR- TGTCATGAAAATAAAAGACTAGGTTTTTGCATGGTTTATATGGCTTTCTCTTGTTTGGAA
ref|NG GGCACATGTGATGCCACAGTGGACGGCTGCAGGGTTTTATTCAGGGGAAGGACTCCTGGG
11470 11480 11490 11500 11510 11520
>>ref|NG_054759.1| Homo sapiens butyrophil (22541 nt)
initn: 82 init1: 82 opt: 127 Z-score: 122.7 bits: 37.8 E(8960): 1.4
banded Smith-Waterman score: 130; 59.9% identity (59.9% similar) in 137 nt overlap (48-171:3472-3608)
20 30 40 50 60 70
PEADRR TGCTTTAAGTTCAGCAATTCCAAACAAGAGAAAGCCATATAAACCATGCA--AAAACCTA
::: ::::: ::::: : : ::::::::
ref|NG AGATGGATTAAAGATTTAAACGTTAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTA
3450 3460 3470 3480 3490 3500
80 90 100 110 120
PEADRR GTCTTTTATTTTCATGACATA--CTTTACAATGGAAAGAATG-------CAGCAAATGCA
: : :: :::: :::::: : : : ::: ::: :: :::: :::
ref|NG GGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCA
3510 3520 3530 3540 3550 3560
130 140 150 160 170 180
PEADRR ACATCAGCAATAG-TAGCAGCTCCAGAAGGTGT-TAGTTTAACTAAATTGGCACCTCAAT
: :: ::: :: : : :: : :: : :: :: :::::::
ref|NG ATGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACA
3570 3580 3590 3600 3610 3620
190 200 210 220 230 240
PEADRR CCCACTTTGGTAACATAATAGTTTTTGATGACCCTATCACATTAAGCCATAGCCTTTCTT
ref|NG GCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTCGCA
3630 3640 3650 3660 3670 3680
>>ref|NG_034038.1| Homo sapiens leukocyte i (21564 nt)
rev-comp initn: 82 init1: 82 opt: 127 Z-score: 123.1 bits: 37.8 E(8960): 1.4
banded Smith-Waterman score: 130; 59.9% identity (59.9% similar) in 137 nt overlap (171-48:13201-13337)
200 190 180 170 160 150
PEADR- TATGTTACCAAAGTGGGATTGAGGTGCCAATTTAGTTAAACTA-ACACCTTCTG-GAGCT
::::::: :: :: : :: : :: : :
ref|NG ATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATT
13180 13190 13200 13210 13220 13230
140 130 120 110 100
PEADR- GCTACTATTGCTGATGTTGCATTTGCTG-------CATTCTTTCCATTGTAAAG--TATG
:: ::: :: :::: :::: :: ::: ::: : : : ::::
ref|NG TTGTCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCACGCCTATG
13240 13250 13260 13270 13280 13290
90 80 70 60 50 40
PEADR- TCATGAAAATAAAAGACTAGGTTT--TTGCATGGTTTATATGGCTTTCTCTTGTTTGGAA
:: :::: :: : :::::::: :: : ::::: ::::: :::
ref|NG TCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTTTAACGTTT
13300 13310 13320 13330 13340 13350
30 20 10
PEADR- TTGCTGAACTTAAAGCAAACAACATCACAAAAAC
ref|NG AAATCTTTATTCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTC
13360 13370 13380 13390 13400 13410
>>ref|NG_013341.2| Homo sapiens DCC netrin (1202732 nt)
rev-comp initn: 174 init1: 104 opt: 126 Z-score: 106.5 bits: 37.5 E(8960): 1.7
banded Smith-Waterman score: 126; 56.9% identity (56.9% similar) in 144 nt overlap (326-190:172448-172589)
350 340 330 320 310 300
PEADR- ATGGTTCCTTGATGATGAGTGCTATTAAGAACAAAAGTGAAACTAAGCCAAGAAGTGTAT
::::::::::: : : :::::::::: :
ref|NG ATTGTATCTCCTGTGTTCCCAGCATGAGCCACAAAAGTGAAGCCAGTCCAAGAAGTG--T
172420 172430 172440 172450 172460 172470
290 280 270 260 250
PEADR- GTGTTTTTGGTATCA-----TAAATATAAAACCCTTGTGCTCTTCCAACTTGTTTTGAAG
: :::: :::: : : :: :::: : : : : :: : ::
ref|NG CTCTTTTGTCCATCAATGTGTCCCCAGCTAAACCTTTTCTTTTGCTTTCTCAAATAGATC
172480 172490 172500 172510 172520 172530
240 230 220 210 200 190
PEADR- AAAGGCTATGGCT--TAATGTGATAGGGTCATCAAAAACTATTATGTTACCAAAGTGGGA
::: ::: : :: ::::: : :: ::: : : :: :: :: ::::
ref|NG AAAATCTACCATTTCTAGAGTGATTGAATCCTCAGAGCATCTTTTGGTATCAAACCGTTT
172540 172550 172560 172570 172580 172590
180 170 160 150 140 130
PEADR- TTGAGGTGCCAATTTAGTTAAACTAACACCTTCTGGAGCTGCTACTATTGCTGATGTTGC
ref|NG TTTCTTTTTTTCTGGTTTCCCTCTGCTATTAGAAAATACAATAATAATTTCAGGCCAGGC
172600 172610 172620 172630 172640 172650
>>ref|NG_032983.1| Homo sapiens CDKN1A inte (45319 nt)
initn: 113 init1: 113 opt: 126 Z-score: 115.8 bits: 37.5 E(8960): 1.7
banded Smith-Waterman score: 126; 75.6% identity (75.6% similar) in 45 nt overlap (115-159:18607-18651)
90 100 110 120 130 140
PEADRR TTTCATGACATACTTTACAATGGAAAGAATGCAGCAAATGCAACATCAGCAATAGTAGCA
::::::: :::: :: ::::: : :::
ref|NG CCAGCAGTTACAGCAGCAGCAGCTCCAGCAGCAGCAATTGCAGCAGCAGCAGTTACTGCA
18580 18590 18600 18610 18620 18630
150 160 170 180 190 200
PEADRR GCTCCAGAAGGTGTTAGTTTAACTAAATTGGCACCTCAATCCCACTTTGGTAACATAATA
::::::: :: :: :
ref|NG GCTCCAGCAGCTGCTCCAGCAGTCCCCACCACAGGCCCCGTTGCCCATGGCTGTCAGCCG
18640 18650 18660 18670 18680 18690
528 residues in 1 query sequences 638075072 residues in 6849 library sequences Tcomplib [36.3.8h Aug, 2019] (64 proc in memory [0G]) start: Wed Jan 22 13:29:58 2020 done: Wed Jan 22 13:30:00 2020 Total Scan time: 53.690 Total Display time: 0.220 Function used was FASTA [36.3.8h Aug, 2019]