All statistics are based on contigs of size >= 500 bp, unless otherwise noted (e.g., "# contigs (>= 0 bp)" and "Total length (>= 0 bp)" include all contigs).

Assembly                    SOAPdenovo2.scafSeq  SOAPdenovo2.scafSeq_broken
# contigs (>= 0 bp)         500300               -                         
# contigs (>= 1000 bp)      55809                46851                     
# contigs (>= 5000 bp)      3647                 2770                      
# contigs (>= 10000 bp)     1076                 805                       
# contigs (>= 25000 bp)     216                  92                        
# contigs (>= 50000 bp)     56                   11                        
Total length (>= 0 bp)      264648000            -                         
Total length (>= 1000 bp)   136479796            103549954                 
Total length (>= 5000 bp)   39282442             27158771                  
Total length (>= 10000 bp)  22040736             13844768                  
Total length (>= 25000 bp)  9324017              3386518                   
Total length (>= 50000 bp)  3916015              745412                    
# contigs                   115414               125347                    
Largest contig              127553               110960                    
Total length                178519097            157944652                 
GC (%)                      54.96                55.14                     
N50                         1943                 1404                      
N75                         1035                 825                       
L50                         21223                25916                     
L75                         53263                63305                     
# N's per 100 kbp           1439.01              67.38