======== Trimmomatic ==========
COMMAND: ['trimmomatic', 'SE', '-threads', '12', 'GQ8KZ7F02.fastq', '../reads.TrimmomaticSL8Q10m50/GQ8KZ7F02_S.fastq', 'ILLUMINACLIP:/mnt/4tb_raid1/workspace/frist/Bbraunii/genome/reads.vetted/454_nov2010/454TrimmingExperiments/454adapters.fa:2:30:10:2:false', 'SLIDINGWINDOW:8:10', 'MINLEN:50']
Start time: 2021-06-05 12:03:07.456403

TrimmomaticSE: Started with arguments:
 -threads 12 GQ8KZ7F02.fastq ../reads.TrimmomaticSL8Q10m50/GQ8KZ7F02_S.fastq ILLUMINACLIP:/mnt/4tb_raid1/workspace/frist/Bbraunii/genome/reads.vetted/454_nov2010/454TrimmingExperiments/454adapters.fa:2:30:10:2:false SLIDINGWINDOW:8:10 MINLEN:50
Using Long Clipping Sequence: 'CCTATCCCCTGTGTGCCTTGCCTATCCCCTGTTGCGTGTCTCAG'
Using Long Clipping Sequence: 'CCATCTCATCCCTGCGTGTCTCCGACTCAG'
Using Long Clipping Sequence: 'CTGAGTCGGAGACACGCAGGGATGAGATGG'
Using Long Clipping Sequence: 'CTGAGACACGCAACAGGGGATAGGCAAGGCACACAGGGGATAGG'
ILLUMINACLIP: Using 0 prefix pairs, 4 forward/reverse sequences, 0 forward only sequences, 0 reverse only sequences
Quality encoding detected as phred33
Input Reads: 697806 Surviving: 693573 (99.39%) Dropped: 4233 (0.61%)
TrimmomaticSE: Completed successfully

Finish time: 2021-06-05 12:03:14.274951
Elapsed time: 0:00:06.818548
======== Trimmomatic ==========
COMMAND: ['trimmomatic', 'SE', '-threads', '12', 'GRAEVHH01.fastq', '../reads.TrimmomaticSL8Q10m50/GRAEVHH01_S.fastq', 'ILLUMINACLIP:/mnt/4tb_raid1/workspace/frist/Bbraunii/genome/reads.vetted/454_nov2010/454TrimmingExperiments/454adapters.fa:2:30:10:2:false', 'SLIDINGWINDOW:8:10', 'MINLEN:50']
Start time: 2021-06-05 12:03:14.275266

TrimmomaticSE: Started with arguments:
 -threads 12 GRAEVHH01.fastq ../reads.TrimmomaticSL8Q10m50/GRAEVHH01_S.fastq ILLUMINACLIP:/mnt/4tb_raid1/workspace/frist/Bbraunii/genome/reads.vetted/454_nov2010/454TrimmingExperiments/454adapters.fa:2:30:10:2:false SLIDINGWINDOW:8:10 MINLEN:50
Using Long Clipping Sequence: 'CCTATCCCCTGTGTGCCTTGCCTATCCCCTGTTGCGTGTCTCAG'
Using Long Clipping Sequence: 'CCATCTCATCCCTGCGTGTCTCCGACTCAG'
Using Long Clipping Sequence: 'CTGAGTCGGAGACACGCAGGGATGAGATGG'
Using Long Clipping Sequence: 'CTGAGACACGCAACAGGGGATAGGCAAGGCACACAGGGGATAGG'
ILLUMINACLIP: Using 0 prefix pairs, 4 forward/reverse sequences, 0 forward only sequences, 0 reverse only sequences
Quality encoding detected as phred33
Input Reads: 701083 Surviving: 696451 (99.34%) Dropped: 4632 (0.66%)
TrimmomaticSE: Completed successfully

Finish time: 2021-06-05 12:03:21.262532
Elapsed time: 0:00:06.987266
======== Trimmomatic ==========
COMMAND: ['trimmomatic', 'SE', '-threads', '12', 'GRAEVHH02.fastq', '../reads.TrimmomaticSL8Q10m50/GRAEVHH02_S.fastq', 'ILLUMINACLIP:/mnt/4tb_raid1/workspace/frist/Bbraunii/genome/reads.vetted/454_nov2010/454TrimmingExperiments/454adapters.fa:2:30:10:2:false', 'SLIDINGWINDOW:8:10', 'MINLEN:50']
Start time: 2021-06-05 12:03:21.262797

TrimmomaticSE: Started with arguments:
 -threads 12 GRAEVHH02.fastq ../reads.TrimmomaticSL8Q10m50/GRAEVHH02_S.fastq ILLUMINACLIP:/mnt/4tb_raid1/workspace/frist/Bbraunii/genome/reads.vetted/454_nov2010/454TrimmingExperiments/454adapters.fa:2:30:10:2:false SLIDINGWINDOW:8:10 MINLEN:50
Using Long Clipping Sequence: 'CCTATCCCCTGTGTGCCTTGCCTATCCCCTGTTGCGTGTCTCAG'
Using Long Clipping Sequence: 'CCATCTCATCCCTGCGTGTCTCCGACTCAG'
Using Long Clipping Sequence: 'CTGAGTCGGAGACACGCAGGGATGAGATGG'
Using Long Clipping Sequence: 'CTGAGACACGCAACAGGGGATAGGCAAGGCACACAGGGGATAGG'
ILLUMINACLIP: Using 0 prefix pairs, 4 forward/reverse sequences, 0 forward only sequences, 0 reverse only sequences
Quality encoding detected as phred33
Input Reads: 736524 Surviving: 732513 (99.46%) Dropped: 4011 (0.54%)
TrimmomaticSE: Completed successfully

Finish time: 2021-06-05 12:03:28.403059
Elapsed time: 0:00:07.140262