Basic Statistics
Measure | Value |
---|---|
Filename | AB2kb_R1.illumina-1.8+_valid_1P.fq.corrected.fq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 30984188 |
Sequences flagged as poor quality | 0 |
Sequence length | 34-125 |
%GC | 58 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AAGTGGC | 11105 | 0.0 | 22333.133 | 102-103 |
GGCCCCA | 14785 | 0.0 | 16774.395 | 106-107 |
GTGGCCC | 14865 | 0.0 | 16684.12 | 104-105 |
AGTGGCC | 9905 | 2.6133199E-5 | 12519.405 | 102-103 |
CCCCAGC | 23250 | 0.0 | 10667.072 | 108-109 |
TGGCCCC | 14150 | 5.3333053E-5 | 8763.584 | 104-105 |
CCCAGCT | 21235 | 1.2011247E-4 | 5839.638 | 108-109 |
GCCCCAG | 23985 | 1.5323678E-4 | 5170.094 | 106-107 |
GTTTGGG | 9425 | 8.5167086E-4 | 2923.7773 | 100-101 |
AAGTTTG | 10195 | 9.964998E-4 | 2702.953 | 100-101 |
CTACATG | 11185 | 0.0011994072 | 2463.7107 | 100-101 |
AGAAGTG | 11775 | 0.0013292654 | 2340.2634 | 100-101 |
ACATGTT | 11840 | 0.0013439798 | 2327.4158 | 100-101 |
GAAGTGG | 21635 | 0.006853821 | 1042.1221 | 100-101 |
CGAGCGT | 26500 | 0.0067307157 | 1039.8718 | 100-101 |
AATCCGC | 18065 | 2.386993E-4 | 442.8621 | 98-99 |
AGAGAGA | 389225 | 0.0052823666 | 141.59729 | 100-101 |
TTTATTT | 12665 | 0.0040076114 | 60.253128 | 96-97 |
GTCTGAA | 13810 | 0.0056452686 | 55.25749 | 96-97 |
GAGAGAG | 394850 | 0.0036474774 | 31.405525 | 98-99 |