Basic Statistics
Measure | Value |
---|---|
Filename | AB2kb_R2.illumina-1.8+_valid_2P.fq.corrected.fq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 30984188 |
Sequences flagged as poor quality | 0 |
Sequence length | 33-127 |
%GC | 59 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGGGGGT | 7750 | 1.567886E-5 | 16163.028 | 108-109 |
GGGGGTT | 8475 | 1.1249212E-4 | 7390.176 | 108-109 |
GGGGGGG | 17080 | 2.0765583E-8 | 7333.9272 | 104-105 |
GTCTTGG | 12325 | 1.1895752E-4 | 6775.5767 | 102-103 |
AAGTCTT | 8030 | 3.534394E-4 | 4456.9824 | 100-101 |
AGTCTTG | 7275 | 7.5973826E-4 | 3130.6086 | 100-101 |
TGTCCCA | 12275 | 8.2585233E-4 | 2915.647 | 100-101 |
TAACTAG | 1470 | 0.0014013766 | 2400.3733 | 98-99 |
ACTAGAC | 2080 | 0.0015558378 | 2272.5596 | 98-99 |
CTGTGCA | 16930 | 0.0015708923 | 2113.9731 | 100-101 |
TCTCTCC | 18295 | 0.0018343804 | 1956.2484 | 100-101 |
TTAACTA | 2660 | 0.0025442904 | 1777.039 | 98-99 |
CTCTCCG | 15950 | 0.0036511454 | 1427.911 | 100-101 |
TGGCCTG | 26550 | 0.0038628331 | 1348.0061 | 100-101 |
CTTAGAA | 3975 | 0.005680678 | 1189.1633 | 98-99 |
TAGGAAC | 4200 | 0.0063417815 | 1125.458 | 98-99 |
TCTCTCT | 272150 | 0.0 | 920.5473 | 112-113 |
CTCTCTC | 275510 | 6.2358595E-8 | 454.66037 | 110-111 |
ACATTGA | 12030 | 0.0022956312 | 69.34023 | 96-97 |
TCATTTT | 12710 | 0.0062312237 | 53.90432 | 96-97 |