# fasta3 -Q -n -b 20 -d 20 -m 0 -z 1 -E 1.0e-5 bio2931786353965476492.tmp.fasta @/home/psgendb/BIRCHDEV/dat/fasta/refseq_rna.nam 6 FASTA searches a protein or DNA sequence data bank version 36.3.6 Aug., 2014(preload9) Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: bio2931786353965476492.tmp.fasta 1>>>BOVPRL - 907 nt Library: @/home/psgendb/BIRCHDEV/dat/fasta/refseq_rna.nam 16908773747 residues in 8294009 sequences Statistics: Expectation_n fit: rho(ln(x))= 8.6511+/-0.000108; mu= 17.7345+/- 0.008 mean_var=91.2502+/-16.617, 0's: 0 Z-trim(106.3): 631 B-trim: 0 in 0/71 Lambda= 0.134263 statistics sampled from 60000 (70860) to 653365 sequences Algorithm: FASTA (3.8 Nov 2011) [optimized] Parameters: +5/-4 matrix (5:-4), open/ext: -12/-4 ktup: 6, E-join: 0.25 (0.171), E-opt: 0.05 (0.0408), width: 16 Scan time: 1028.730 The best scores are: opt bits E(8294009) ref|NM_173953.2| Bos taurus prolactin (PRL), m ( 907) [f] 4535 888.7 0 ref|XM_005894272.1| PREDICTED: Bos mutus prola ( 890) [f] 4389 860.4 0 ref|XM_006072861.1| PREDICTED: Bubalus bubalis ( 914) [f] 4299 843.0 0 ref|XM_005976860.1| PREDICTED: Pantholops hodg ( 905) [f] 4251 833.7 0 ref|NM_001290885.1| Bubalus bubalis prolactin- ( 862) [f] 4163 816.6 0 ref|NM_001285547.1| Capra hircus PROLACTIN pro ( 845) [f] 4020 788.9 0 ref|NM_001009306.1| Ovis aries prolactin (PRL) ( 926) [f] 3933 772.1 0 ref|XM_005976859.1| PREDICTED: Pantholops hodg ( 865) [f] 3859 757.8 1.2e-215 ref|XM_004273529.1| PREDICTED: Orcinus orca pr ( 901) [f] 3320 653.3 3.2e-184 ref|XM_007116323.1| PREDICTED: Physeter catodo ( 896) [f] 3318 653.0 4.2e-184 ref|XM_007447055.1| PREDICTED: Lipotes vexilli ( 897) [f] 3311 651.6 1.1e-183 ref|XM_004317251.1| PREDICTED: Tursiops trunca ( 899) [f] 3301 649.7 4.2e-183 ref|XM_007197144.1| PREDICTED: Balaenoptera ac ( 894) [f] 3281 645.8 6.1e-182 ref|XM_007116322.1| PREDICTED: Physeter catodo ( 893) [f] 3274 644.4 1.6e-181 ref|XM_007447054.1| PREDICTED: Lipotes vexilli ( 894) [f] 3267 643.1 4e-181 ref|XM_007116324.1| PREDICTED: Physeter catodo ( 847) [f] 3123 615.2 9.8e-173 ref|NM_001008275.2| Canis lupus familiaris pro ( 930) [f] 3080 606.8 3.2e-170 ref|XM_004417690.1| PREDICTED: Odobenus rosmar ( 891) [f] 3022 595.6 7.7e-167 ref|XM_005665624.1| PREDICTED: Sus scrofa prol ( 932) [f] 3019 595.0 1.2e-166 ref|XM_006740202.1| PREDICTED: Leptonychotes w ( 881) [f] 2965 584.6 1.6e-163 >>ref|NM_173953.2| Bos taurus prolactin (PRL (907 nt) initn: 4535 init1: 4535 opt: 4535 Z-score: 4742.2 bits: 888.7 E(8294009): 0 banded Smith-Waterman score: 4535; 100.0% identity (100.0% similar) in 907 nt overlap (1-907:1-907) 10 20 30 40 50 60 BOVPRL TGCTTGGCTGAGGAGCCATAGGACGAGAGCTTCCTGGTGAAGTGTGTTTCTTGAAATCAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|NM TGCTTGGCTGAGGAGCCATAGGACGAGAGCTTCCTGGTGAAGTGTGTTTCTTGAAATCAT 10 20 30 40 50 60 70 80 90 100 110 120 BOVPRL CACCACCATGGACAGCAAAGGTTCGTCGCAGAAAGGGTCCCGCCTGCTCCTGCTGCTGGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|NM CACCACCATGGACAGCAAAGGTTCGTCGCAGAAAGGGTCCCGCCTGCTCCTGCTGCTGGT 70 80 90 100 110 120 130 140 150 160 170 180 BOVPRL GGTGTCAAATCTACTCTTGTGCCAGGGTGTGGTCTCCACCCCCGTCTGTCCCAATGGGCC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|NM GGTGTCAAATCTACTCTTGTGCCAGGGTGTGGTCTCCACCCCCGTCTGTCCCAATGGGCC 130 140 150 160 170 180 190 200 210 220 230 240 BOVPRL TGGCAACTGCCAGGTATCCCTTCGAGACCTGTTTGACCGGGCAGTCATGGTGTCCCACTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|NM TGGCAACTGCCAGGTATCCCTTCGAGACCTGTTTGACCGGGCAGTCATGGTGTCCCACTA 190 200 210 220 230 240 250 260 270 280 290 300 BOVPRL CATCCATGACCTCTCCTCGGAAATGTTCAACGAATTTGATAAACGGTATGCCCAGGGCAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|NM CATCCATGACCTCTCCTCGGAAATGTTCAACGAATTTGATAAACGGTATGCCCAGGGCAA 250 260 270 280 290 300 310 320 330 340 350 360 BOVPRL AGGGTTCATTACCATGGCCCTCAACAGCTGCCATACCTCCTCCCTTCCTACCCCGGAAGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|NM AGGGTTCATTACCATGGCCCTCAACAGCTGCCATACCTCCTCCCTTCCTACCCCGGAAGA 310 320 330 340 350 360 370 380 390 400 410 420 BOVPRL TAAAGAACAAGCCCAACAGACCCATCATGAAGTCCTTATGAGCTTGATTCTTGGGTTGCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|NM TAAAGAACAAGCCCAACAGACCCATCATGAAGTCCTTATGAGCTTGATTCTTGGGTTGCT 370 380 390 400 410 420 430 440 450 460 470 480 BOVPRL GCGCTCCTGGAATGACCCTCTGTATCACCTAGTCACCGAGGTACGGGGTATGAAAGGAGC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|NM GCGCTCCTGGAATGACCCTCTGTATCACCTAGTCACCGAGGTACGGGGTATGAAAGGAGC 430 440 450 460 470 480 490 500 510 520 530 540 BOVPRL CCCAGATGCTATCCTATCGAGGGCCATAGAGATTGAGGAAGAAAACAAACGACTTCTGGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|NM CCCAGATGCTATCCTATCGAGGGCCATAGAGATTGAGGAAGAAAACAAACGACTTCTGGA 490 500 510 520 530 540 550 560 570 580 590 600 BOVPRL AGGCATGGAGATGATATTTGGCCAGGTTATTCCTGGAGCCAAAGAGACTGAGCCCTACCC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|NM AGGCATGGAGATGATATTTGGCCAGGTTATTCCTGGAGCCAAAGAGACTGAGCCCTACCC 550 560 570 580 590 600 610 620 630 640 650 660 BOVPRL TGTGTGGTCAGGACTCCCGTCCCTGCAAACTAAGGATGAAGATGCACGTTATTCTGCTTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|NM TGTGTGGTCAGGACTCCCGTCCCTGCAAACTAAGGATGAAGATGCACGTTATTCTGCTTT 610 620 630 640 650 660 670 680 690 700 710 720 BOVPRL TTATAACCTGCTCCACTGCCTGCGCAGGGATTCAAGCAAGATTGACACTTACCTTAAGCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|NM TTATAACCTGCTCCACTGCCTGCGCAGGGATTCAAGCAAGATTGACACTTACCTTAAGCT 670 680 690 700 710 720 730 740 750 760 770 780 BOVPRL CCTGAATTGCAGAATCATCTACAACAACAACTGCTAAGCCCACATTCCATCCTATCCATT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|NM CCTGAATTGCAGAATCATCTACAACAACAACTGCTAAGCCCACATTCCATCCTATCCATT 730 740 750 760 770 780 790 800 810 820 830 840 BOVPRL TCTGAGATGGTTCTTAATGATCCATTCCCTGGCAAACTTCTCTGAGCTTTATAGCTTTGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|NM TCTGAGATGGTTCTTAATGATCCATTCCCTGGCAAACTTCTCTGAGCTTTATAGCTTTGT 790 800 810 820 830 840 850 860 870 880 890 900 BOVPRL AATGCATGCTTGGCTCTAATGGGTTTCATCTTAAATAAAAACAGACTCTGTAGCGATGTC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|NM AATGCATGCTTGGCTCTAATGGGTTTCATCTTAAATAAAAACAGACTCTGTAGCGATGTC 850 860 870 880 890 900 BOVPRL AAAATCT ::::::: ref|NM AAAATCT >>ref|XM_005894272.1| PREDICTED: Bos mutus (890 nt) initn: 3743 init1: 3743 opt: 4389 Z-score: 4589.5 bits: 860.4 E(8294009): 0 banded Smith-Waterman score: 4389; 99.3% identity (99.3% similar) in 891 nt overlap (14-904:1-890) 10 20 30 40 50 60 BOVPRL TGCTTGGCTGAGGAGCCATAGGACGAGAGCTTCCTGGTGAAGTGTGTTTCTTGAAATCAT ::::::::::::::::::::::::::::::::::::::::::::::: ref|XM AGCCATAGGACGAGAGCTTCCTGGTGAAGTGTGTTTCTTGAAATCAT 10 20 30 40 70 80 90 100 110 120 BOVPRL CACCACCATGGACAGCAAAGGTTCGTCGCAGAAAGGGTCCCGCCTGCTCCTGCTGCTGGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|XM CACCACCATGGACAGCAAAGGTTCGTCGCAGAAAGGGTCCCGCCTGCTCCTGCTGCTGGT 50 60 70 80 90 100 130 140 150 160 170 180 BOVPRL GGTGTCAAATCTACTCTTGTGCCAGGGTGTGGTCTCCACCCCCGTCTGTCCCAATGGGCC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|XM GGTGTCAAATCTACTCTTGTGCCAGGGTGTGGTCTCCACCCCCGTCTGTCCCAATGGGCC 110 120 130 140 150 160 190 200 210 220 230 240 BOVPRL TGGCAACTGCCAGGTATCCCTTCGAGACCTGTTTGACCGGGCAGTCATGGTGTCCCACTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|XM TGGCAACTGCCAGGTATCCCTTCGAGACCTGTTTGACCGGGCAGTCATGGTGTCCCACTA 170 180 190 200 210 220 250 260 270 280 290 300 BOVPRL CATCCATGACCTCTCCTCGGAAATGTTCAACGAATTTGATAAACGGTATGCCCAGGGCAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|XM CATCCATGACCTCTCCTCGGAAATGTTCAACGAATTTGATAAACGGTATGCCCAGGGCAA 230 240 250 260 270 280 310 320 330 340 350 360 BOVPRL AGGGTTCATTACCATGGCCCTCAACAGCTGCCATACCTCCTCCCTTCCTACCCCGGAAGA :::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::: ref|XM AGGGTTCATTACCATGGCCCTCAACAGCTGCCATACCTCCTCCCTTCCTACCCCTGAAGA 290 300 310 320 330 340 370 380 390 400 410 420 BOVPRL TAAAGAACAAGCCCAACAGACCCATCATGAAGTCCTTATGAGCTTGATTCTTGGGTTGCT :::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::: ref|XM TAAAGAACAAGCCCAACAGACCCACCATGAAGTCCTTATGAGCTTGATTCTTGGGTTGCT 350 360 370 380 390 400 430 440 450 460 470 480 BOVPRL GCGCTCCTGGAATGACCCTCTGTATCACCTAGTCACCGAGGTACGGGGTATGAAAGGAGC :::::::::::::::::::::::::::::::::::::::::: ::::::::::::::::: ref|XM GCGCTCCTGGAATGACCCTCTGTATCACCTAGTCACCGAGGTGCGGGGTATGAAAGGAGC 410 420 430 440 450 460 490 500 510 520 530 540 BOVPRL CCCAGATGCTATCCTATCGAGGGCCATAGAGATTGAGGAAGAAAACAAACGACTTCTGGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|XM CCCAGATGCTATCCTATCGAGGGCCATAGAGATTGAGGAAGAAAACAAACGACTTCTGGA 470 480 490 500 510 520 550 560 570 580 590 600 BOVPRL AGGCATGGAGATGATATTTGGCCAGGTTATTCCTGGAGCCAAAGAGACTGAGCCCTACCC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|XM AGGCATGGAGATGATATTTGGCCAGGTTATTCCTGGAGCCAAAGAGACTGAGCCCTACCC 530 540 550 560 570 580 610 620 630 640 650 660 BOVPRL TGTGTGGTCAGGACTCCCGTCCCTGCAAACTAAGGATGAAGATGCACGTTATTCTGCTTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|XM TGTGTGGTCAGGACTCCCGTCCCTGCAAACTAAGGATGAAGATGCACGTTATTCTGCTTT 590 600 610 620 630 640 670 680 690 700 710 720 BOVPRL TTATAACCTGCTCCACTGCCTGCGCAGGGATTCAAGCAAGATTGACACTTACCTTAAGCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|XM TTATAACCTGCTCCACTGCCTGCGCAGGGATTCAAGCAAGATTGACACTTACCTTAAGCT 650 660 670 680 690 700 730 740 750 760 770 780 BOVPRL CCTGAATTGCAGAATCATCTACAACAACAACTGCTAAGCCCACATTCCATCCTATCCATT :::::::::::::::::::::::::::::::::::::::::::::: :::::: :::::: ref|XM CCTGAATTGCAGAATCATCTACAACAACAACTGCTAAGCCCACATT-CATCCTTTCCATT 710 720 730 740 750 760 790 800 810 820 830 840 BOVPRL TCTGAGATGGTTCTTAATGATCCATTCCCTGGCAAACTTCTCTGAGCTTTATAGCTTTGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|XM TCTGAGATGGTTCTTAATGATCCATTCCCTGGCAAACTTCTCTGAGCTTTATAGCTTTGT 770 780 790 800 810 820 850 860 870 880 890 900 BOVPRL AATGCATGCTTGGCTCTAATGGGTTTCATCTTAAATAAAAACAGACTCTGTAGCGATGTC ::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::: ref|XM AATGCATGCTTGGATCTAATGGGTTTCATCTTAAATAAAAACAGACTCTGTAGCGATGTC 830 840 850 860 870 880 BOVPRL AAAATCT :::: ref|XM AAAA 890 >>ref|XM_006072861.1| PREDICTED: Bubalus bu (914 nt) initn: 3271 init1: 3271 opt: 4299 Z-score: 4495.0 bits: 843.0 E(8294009): 0 banded Smith-Waterman score: 4299; 98.0% identity (98.0% similar) in 897 nt overlap (14-907:17-912) 10 20 30 40 50 BOVPRL TGCTTGGCTGAGGAGCCATAGGACGAGAGCTTCCTGGTGAAGTGTGTTTCTTGAAAT :::::::::::::::::::::::::::::::::::::::::::: ref|XM CATTTGGGGAAGAGAAAGCCATAGGACGAGAGCTTCCTGGTGAAGTGTGTTTCTTGAAAT 10 20 30 40 50 60 60 70 80 90 100 110 BOVPRL CATCACCACCATGGACAGCAAAGGTTCGTCGCAGAA---AGGGTCCCGCCTGCTCCTGCT :::::::::::::::::::::::::::::: ::::: ::::::: ::::::::::::: ref|XM CATCACCACCATGGACAGCAAAGGTTCGTCACAGAAAGCAGGGTCCTGCCTGCTCCTGCT 70 80 90 100 110 120 120 130 140 150 160 170 BOVPRL GCTGGTGGTGTCAAATCTACTCTTGTGCCAGGGTGTGGTCTCCACCCCCGTCTGTCCCAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|XM GCTGGTGGTGTCAAATCTACTCTTGTGCCAGGGTGTGGTCTCCACCCCCGTCTGTCCCAA 130 140 150 160 170 180 180 190 200 210 220 230 BOVPRL TGGGCCTGGCAACTGCCAGGTATCCCTTCGAGACCTGTTTGACCGGGCAGTCATGGTGTC ::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::: ref|XM TGGGCCTGGCAACTGCCAGGTGTCCCTTCGAGACCTGTTTGACCGGGCAGTCATGGTGTC 190 200 210 220 230 240 240 250 260 270 280 290 BOVPRL CCACTACATCCATGACCTCTCCTCGGAAATGTTCAACGAATTTGATAAACGGTATGCCCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|XM CCACTACATCCATGACCTCTCCTCGGAAATGTTCAACGAATTTGATAAACGGTATGCCCA 250 260 270 280 290 300 300 310 320 330 340 350 BOVPRL GGGCAAAGGGTTCATTACCATGGCCCTCAACAGCTGCCATACCTCCTCCCTTCCTACCCC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|XM GGGCAAAGGGTTCATTACCATGGCCCTCAACAGCTGCCATACCTCCTCCCTTCCTACCCC 310 320 330 340 350 360 360 370 380 390 400 410 BOVPRL GGAAGATAAAGAACAAGCCCAACAGACCCATCATGAAGTCCTTATGAGCTTGATTCTTGG ::::: ::::::::::::::::::::::: ::::::::::::::::::::::::::::: ref|XM TGAAGACAAAGAACAAGCCCAACAGACCCACCATGAAGTCCTTATGAGCTTGATTCTTGG 370 380 390 400 410 420 420 430 440 450 460 470 BOVPRL GTTGCTGCGCTCCTGGAATGACCCTCTGTATCACCTAGTCACCGAGGTACGGGGTATGAA :::::::::::::::::::::::::::::::::::::::::: ::::: ::::::::::: ref|XM GTTGCTGCGCTCCTGGAATGACCCTCTGTATCACCTAGTCACAGAGGTGCGGGGTATGAA 430 440 450 460 470 480 480 490 500 510 520 530 BOVPRL AGGAGCCCCAGATGCTATCCTATCGAGGGCCATAGAGATTGAGGAAGAAAACAAACGACT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|XM AGGAGCCCCAGATGCTATCCTATCGAGGGCCATAGAGATTGAGGAAGAAAACAAACGACT 490 500 510 520 530 540 540 550 560 570 580 590 BOVPRL TCTGGAAGGCATGGAGATGATATTTGGCCAGGTTATTCCTGGAGCCAAAGAGACTGAGCC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|XM TCTGGAAGGCATGGAGATGATATTTGGCCAGGTTATTCCTGGAGCCAAAGAGACTGAGCC 550 560 570 580 590 600 600 610 620 630 640 650 BOVPRL CTACCCTGTGTGGTCAGGACTCCCGTCCCTGCAAACTAAGGATGAAGATGCACGTTATTC :::::::::::::::::::::::: ::::::::::::::::::::::: :: :::::::: ref|XM CTACCCTGTGTGGTCAGGACTCCCATCCCTGCAAACTAAGGATGAAGAGGCGCGTTATTC 610 620 630 640 650 660 660 670 680 690 700 710 BOVPRL TGCTTTTTATAACCTGCTCCACTGCCTGCGCAGGGATTCAAGCAAGATTGACACTTACCT :::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::: ref|XM TGCTTTTTATAACCTGCTTCACTGCCTGCGCAGGGATTCAAGCAAGATTGACACTTACCT 670 680 690 700 710 720 720 730 740 750 760 770 BOVPRL TAAGCTCCTGAATTGCAGAATCATCTACAACAACAACTGCTAAGCCCACATTCCATCCTA :::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::: ref|XM TAAGCTCCTGAATTGCAGAATCATCTACAACAACAACTGCTAAGCCCACATT-CATCCTA 730 740 750 760 770 780 790 800 810 820 830 BOVPRL TCCATTTCTGAGATGGTTCTTAATGATCCATTCCCTGGCAAACTTCTCTGAGCTTTATAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|XM TCCATTTCTGAGATGGTTCTTAATGATCCATTCCCTGGCAAACTTCTCTGAGCTTTATAG 780 790 800 810 820 830 840 850 860 870 880 890 BOVPRL CTTTGTAATGCATGCTTGGCTCTAATGGGTTTCATCTTAAATAAAAACAGACTCTGTAGC ::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::: ref|XM CTTTGTAATGCATGCTTGGCTCTAATGGGTTTCATCTTAAATAAAAACAGACTCTATAGA 840 850 860 870 880 890 900 BOVPRL GATGTCAAAATCT ::::::::::::: ref|XM GATGTCAAAATCTAA 900 910 >>ref|XM_005976860.1| PREDICTED: Pantholops (905 nt) initn: 3606 init1: 3606 opt: 4251 Z-score: 4444.9 bits: 833.7 E(8294009): 0 banded Smith-Waterman score: 4251; 97.4% identity (97.4% similar) in 894 nt overlap (14-907:11-903) 10 20 30 40 50 60 BOVPRL TGCTTGGCTGAGGAGCCATAGGACGAGAGCTTCCTGGTGAAGTGTGTTTCTTGAAATCAT ::: ::::::::::::::::::::::::::::::::::::::::::: ref|XM GGGAAGAGAAAGCTATAGGACGAGAGCTTCCTGGTGAAGTGTGTTTCTTGAAATCAT 10 20 30 40 50 70 80 90 100 110 120 BOVPRL CACCACCATGGACAGCAAAGGTTCGTCGCAGAAAGGGTCCCGCCTGCTCCTGCTGCTGGT :::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::: ref|XM CACCACCATGGACAGCAAAGGTTCATCGCAGAAAGGGTCCCGCCTGCTCCTGCTGCTGGT 60 70 80 90 100 110 130 140 150 160 170 180 BOVPRL GGTGTCAAATCTACTCTTGTGCCAGGGTGTGGTCTCCACCCCCGTCTGTCCCAATGGGCC ::::::::::::::::::::: :::::::::: ::::::::::::::::::::::::::: ref|XM GGTGTCAAATCTACTCTTGTGTCAGGGTGTGGCCTCCACCCCCGTCTGTCCCAATGGGCC 120 130 140 150 160 170 190 200 210 220 230 240 BOVPRL TGGCAACTGCCAGGTATCCCTTCGAGACCTGTTTGACCGGGCAGTCATGGTGTCCCACTA ::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::: ref|XM TGGCAACTGCCAGGTGTCCCTTCGAGACCTGTTTGACCGGGCAGTCATGGTGTCCCACTA 180 190 200 210 220 230 250 260 270 280 290 300 BOVPRL CATCCATGACCTCTCCTCGGAAATGTTCAACGAATTTGATAAACGGTATGCCCAGGGCAA ::::::: :::::::::::::::::::::::::::::::::::::::: ::::::::::: ref|XM CATCCATAACCTCTCCTCGGAAATGTTCAACGAATTTGATAAACGGTACGCCCAGGGCAA 240 250 260 270 280 290 310 320 330 340 350 360 BOVPRL AGGGTTCATTACCATGGCCCTCAACAGCTGCCATACCTCCTCCCTTCCTACCCCGGAAGA :::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::: ref|XM AGGGTTCATTACCATGGCCCTCAACAGCTGCCATACCTCCTCCCTTCCTACCCCTGAAGA 300 310 320 330 340 350 370 380 390 400 410 420 BOVPRL TAAAGAACAAGCCCAACAGACCCATCATGAAGTCCTTATGAGCTTGATTCTTGGGTTGCT ::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::: ref|XM CAAAGAACAAGCCCAACAGACCCACCATGAAGTCCTTATGAGCTTGATTCTTGGGTTGCT 360 370 380 390 400 410 430 440 450 460 470 480 BOVPRL GCGCTCCTGGAATGACCCTCTGTATCACCTAGTCACCGAGGTACGGGGTATGAAAGGAGC :::::::::::::::::::::::::::::::::::: ::::: :::::::::::::::: ref|XM GCGCTCCTGGAATGACCCTCTGTATCACCTAGTCACAGAGGTGCGGGGTATGAAAGGAGT 420 430 440 450 460 470 490 500 510 520 530 540 BOVPRL CCCAGATGCTATCCTATCGAGGGCCATAGAGATTGAGGAAGAAAACAAACGACTTCTGGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|XM CCCAGATGCTATCCTATCGAGGGCCATAGAGATTGAGGAAGAAAACAAACGACTTCTGGA 480 490 500 510 520 530 550 560 570 580 590 600 BOVPRL AGGCATGGAGATGATATTTGGCCAGGTTATTCCTGGAGCCAAAGAGACTGAGCCCTACCC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|XM AGGCATGGAGATGATATTTGGCCAGGTTATTCCTGGAGCCAAAGAGACTGAGCCCTACCC 540 550 560 570 580 590 610 620 630 640 650 660 BOVPRL TGTGTGGTCAGGACTCCCGTCCCTGCAAACTAAGGATGAAGATGCACGTTATTCTGCTTT :::::::::::::::::: :: ::::::::::::::::::::::::::: :::::::::: ref|XM TGTGTGGTCAGGACTCCCATCTCTGCAAACTAAGGATGAAGATGCACGTCATTCTGCTTT 600 610 620 630 640 650 670 680 690 700 710 720 BOVPRL TTATAACCTGCTCCACTGCCTGCGCAGGGATTCAAGCAAGATTGACACTTACCTTAAGCT ::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|XM TTACAACCTGCTCCACTGCCTGCGCAGGGATTCAAGCAAGATTGACACTTACCTTAAGCT 660 670 680 690 700 710 730 740 750 760 770 780 BOVPRL CCTGAATTGCAGAATCATCTACAACAACAACTGCTAAGCCCACATTCCATCCTATCCATT :::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::: ref|XM CCTGAATTGCAGAATCATCTACAACAACAACTGCTAAGCCCACATT-CATCCTATCCATT 720 730 740 750 760 770 790 800 810 820 830 840 BOVPRL TCTGAGATGGTTCTTAATGATCCATTCCCTGGCAAACTTCTCTGAGCTTTATAGCTTTGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: : ref|XM TCTGAGATGGTTCTTAATGATCCATTCCCTGGCAAACTTCTCTGAGCTTTATAGCTTTTT 780 790 800 810 820 830 850 860 870 880 890 900 BOVPRL AATGCATGCTTGGCTCTAATGGGTTTCATCTTAAATAAAAACAGACTCTGTAGCGATGTC :::::::::::::::::::::::::::::::::::::::::::::::: ::: ::::: ref|XM AATGCATGCTTGGCTCTAATGGGTTTCATCTTAAATAAAAACAGACTCCATAGAAATGTC 840 850 860 870 880 890 BOVPRL AAAATCT ::::::: ref|XM AAAATCTAA 900 >>ref|NM_001290885.1| Bubalus bubalis prola (862 nt) initn: 3936 init1: 3646 opt: 4163 Z-score: 4353.2 bits: 816.6 E(8294009): 0 banded Smith-Waterman score: 4163; 98.4% identity (98.4% similar) in 865 nt overlap (9-873:1-862) 10 20 30 40 50 60 BOVPRL TGCTTGGCTGAGGAGCCATAGGACGAGAGCTTCCTGGTGAAGTGTGTTTCTTGAAATCAT ::::::::: :::::::::::::::::::::::::::::::::::::::::: ref|NM TGAGGAGCC-TAGGACGAGAGCTTCCTGGTGAAGTGTGTTTCTTGAAATCAT 10 20 30 40 50 70 80 90 100 110 120 BOVPRL CACCACCATGGACAGCAAAGGTTCGTCGCAGAAAGGGTCCCGCCTGCTCCTGCTGCTGGT ::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::: ref|NM CACCACCATGGACAGCAAAGGTTCGTCACAGAAAGGGTCCCGCCTGCTCCTGCTGCTGGT 60 70 80 90 100 110 130 140 150 160 170 180 BOVPRL GGTGTCAAATCTACTCTTGTGCCAGGGTGTGGTCTCCACCCCCGTCTGTCCCAATGGGCC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|NM GGTGTCAAATCTACTCTTGTGCCAGGGTGTGGTCTCCACCCCCGTCTGTCCCAATGGGCC 120 130 140 150 160 170 190 200 210 220 230 240 BOVPRL TGGCAACTGCCAGGTATCCCTTCGAGACCTGTTTGACCGGGCAGTCATGGTGTCCCACTA ::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::: ref|NM TGGCAACTGCCAGGTGTCCCTTCGAGACCTGTTTGACCGGGCAGTCATGGTGTCCCACTA 180 190 200 210 220 230 250 260 270 280 290 300 BOVPRL CATCCATGACCTCTCCTCGGAAATGTTCAACGAATTTGATAAACGGTATGCCCAGGGCAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|NM CATCCATGACCTCTCCTCGGAAATGTTCAACGAATTTGATAAACGGTATGCCCAGGGCAA 240 250 260 270 280 290 310 320 330 340 350 360 BOVPRL AGGGTTCATTACCATGGCCCTCAACAGCTGCCATACCTCCTCCCTTCCTACCCCGGAAGA :::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::: ref|NM AGGGTTCATTACCATGGCCCTCAACAGCTGCCATACCTCCTCCCTTCCTACCCCTGAAGA 300 310 320 330 340 350 370 380 390 400 410 420 BOVPRL TAAAGAACAAGCCCAACAGACCCATCATGAAGTCCTTATGAGCTTGATTCTTGGGTTGCT ::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::: ref|NM CAAAGAACAAGCCCAACAGACCCACCATGAAGTCCTTATGAGCTTGATTCTTGGGTTGCT 360 370 380 390 400 410 430 440 450 460 470 480 BOVPRL GCGCTCCTGGAATGACCCTCTGTATCACCTAGTCACCGAGGTACGGGGTATGAAAGGAGC :::::::::::::::::::::::::::::::::::: ::::: ::::::::::::::::: ref|NM GCGCTCCTGGAATGACCCTCTGTATCACCTAGTCACAGAGGTGCGGGGTATGAAAGGAGC 420 430 440 450 460 470 490 500 510 520 530 540 BOVPRL CCCAGATGCTATCCTATCGAGGGCCATAGAGATTGAGGAAGAAAACAAACGACTTCTGGA :::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::: ref|NM CCCAGATGCTATCCTACCGAGGGCCATAGAGATTGAGGAAGAAAACAAACGACTTCTGGA 480 490 500 510 520 530 550 560 570 580 590 600 BOVPRL AGGCATGGAGATGATATTTGGCCAGGTTATTCCTGGAGCCAAAGAGACTGAGCCCTACCC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|NM AGGCATGGAGATGATATTTGGCCAGGTTATTCCTGGAGCCAAAGAGACTGAGCCCTACCC 540 550 560 570 580 590 610 620 630 640 650 660 BOVPRL TGTGTGGTCAGGACTCCCGTCCCTGCAAACTAAGGATGAAGATGCACGTTATTCTGCTTT :::::::::::::::::: ::::::::::::::::::::::: :: :::::::::::::: ref|NM TGTGTGGTCAGGACTCCCATCCCTGCAAACTAAGGATGAAGAGGCGCGTTATTCTGCTTT 600 610 620 630 640 650 670 680 690 700 710 720 BOVPRL TTATAACCTGCTCCACTGCCTGCGCAGGGATTCAAGCAAGATTGACACTTACCTTAAGCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|NM TTATAACCTGCTCCACTGCCTGCGCAGGGATTCAAGCAAGATTGACACTTACCTTAAGCT 660 670 680 690 700 710 730 740 750 760 770 780 BOVPRL CCTGAATTGCAGAATCATCTACAACAACAACTGCTAAGCCCACATTCCATCCTATCCATT :::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::: ref|NM CCTGAATTGCAGAATCATCTACAACAACAACTGCTAAGCCCACATT-CATCCTATCCATT 720 730 740 750 760 770 790 800 810 820 830 840 BOVPRL TCTGAGATGGTTCTTAATGATCCATTCCCTGGCAAACTTCTCTGAGCTTTATAGCTTTGT :::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::: ref|NM TCTGAGATGGTTCTTAATGATCCATTCCCT-GCAAACTTCTCTGAGCTTTATAGCTTTGT 780 790 800 810 820 850 860 870 880 890 900 BOVPRL AATGCATGCTTGGCTCTAATGGGTTTCATCTTAAATAAAAACAGACTCTGTAGCGATGTC ::::::::::::::::::::::::::::::::: ref|NM AATGCATGCTTGGCTCTAATGGGTTTCATCTTA 830 840 850 860 BOVPRL AAAATCT >>ref|NM_001285547.1| Capra hircus PROLACTI (845 nt) initn: 3569 init1: 3569 opt: 4020 Z-score: 4203.7 bits: 788.9 E(8294009): 0 banded Smith-Waterman score: 4020; 97.4% identity (97.4% similar) in 846 nt overlap (20-865:1-845) 10 20 30 40 50 60 BOVPRL TGCTTGGCTGAGGAGCCATAGGACGAGAGCTTCCTGGTGAAGTGTGTTTCTTGAAATCAT ::::::::::::::::::::::::::::::::::::::::: ref|NM AGGACGAGAGCTTCCTGGTGAAGTGTGTTTCTTGAAATCAT 10 20 30 40 70 80 90 100 110 120 BOVPRL CACCACCATGGACAGCAAAGGTTCGTCGCAGAAAGGGTCCCGCCTGCTCCTGCTGCTGGT :::::::::::::::::::::::: :::::::::::::::::::::::::::::::::: ref|NM CACCACCATGGACAGCAAAGGTTCAGCGCAGAAAGGGTCCCGCCTGCTCCTGCTGCTGGT 50 60 70 80 90 100 130 140 150 160 170 180 BOVPRL GGTGTCAAATCTACTCTTGTGCCAGGGTGTGGTCTCCACCCCCGTCTGTCCCAATGGGCC ::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::: ref|NM GGTGTCAAATCTACTCTTGTGTCAGGGTGTGGTCTCCACCCCCGTCTGTCCCAATGGGCC 110 120 130 140 150 160 190 200 210 220 230 240 BOVPRL TGGCAACTGCCAGGTATCCCTTCGAGACCTGTTTGACCGGGCAGTCATGGTGTCCCACTA ::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::: ref|NM TGGCAACTGCCAGGTGTCCCTTCGAGACCTGTTTGACCGGGCAGTCATGGTGTCCCACTA 170 180 190 200 210 220 250 260 270 280 290 300 BOVPRL CATCCATGACCTCTCCTCGGAAATGTTCAACGAATTTGATAAACGGTATGCCCAGGGCAA ::::::: :::::::::::::::::::::: ::::::::::::::::: ::::::::::: ref|NM CATCCATAACCTCTCCTCGGAAATGTTCAATGAATTTGATAAACGGTACGCCCAGGGCAA 230 240 250 260 270 280 310 320 330 340 350 360 BOVPRL AGGGTTCATTACCATGGCCCTCAACAGCTGCCATACCTCCTCCCTTCCTACCCCGGAAGA ::::: :::::::::::::::::::::::::::::::::::::::::::::::: ::::: ref|NM AGGGTACATTACCATGGCCCTCAACAGCTGCCATACCTCCTCCCTTCCTACCCCTGAAGA 290 300 310 320 330 340 370 380 390 400 410 420 BOVPRL TAAAGAACAAGCCCAACAGACCCATCATGAAGTCCTTATGAGCTTGATTCTTGGGTTGCT ::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::: ref|NM CAAAGAACAAGCCCAACAGACCCACCATGAAGTCCTTATGAGCTTGATTCTTGGGTTGCT 350 360 370 380 390 400 430 440 450 460 470 480 BOVPRL GCGCTCCTGGAATGACCCTCTGTATCACCTAGTCACCGAGGTACGGGGTATGAAAGGAGC :::::::::::::::::::::::::::::::::::: ::::: :::::::::::::::: ref|NM GCGCTCCTGGAATGACCCTCTGTATCACCTAGTCACAGAGGTGCGGGGTATGAAAGGAGT 410 420 430 440 450 460 490 500 510 520 530 540 BOVPRL CCCAGATGCTATCCTATCGAGGGCCATAGAGATTGAGGAAGAAAACAAACGACTTCTGGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|NM CCCAGATGCTATCCTATCGAGGGCCATAGAGATTGAGGAAGAAAACAAACGACTTCTGGA 470 480 490 500 510 520 550 560 570 580 590 600 BOVPRL AGGCATGGAGATGATATTTGGCCAGGTTATTCCTGGAGCCAAAGAGACTGAGCCCTACCC :::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::: ref|NM AGGCATGGAGATGATATTGGGCCAGGTTATTCCTGGAGCCAAAGAGACTGAGCCCTACCC 530 540 550 560 570 580 610 620 630 640 650 660 BOVPRL TGTGTGGTCAGGACTCCCGTCCCTGCAAACTAAGGATGAAGATGCACGTTATTCTGCTTT :::::::::::::::::: ::::::::::::::::::::::: :::::: :::::::::: ref|NM TGTGTGGTCAGGACTCCCATCCCTGCAAACTAAGGATGAAGAGGCACGTCATTCTGCTTT 590 600 610 620 630 640 670 680 690 700 710 720 BOVPRL TTATAACCTGCTCCACTGCCTGCGCAGGGATTCAAGCAAGATTGACACTTACCTTAAGCT ::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|NM TTACAACCTGCTCCACTGCCTGCGCAGGGATTCAAGCAAGATTGACACTTACCTTAAGCT 650 660 670 680 690 700 730 740 750 760 770 780 BOVPRL CCTGAATTGCAGAATCATCTACAACAACAACTGCTAAGCCCACATTCCATCCTATCCATT :::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::: ref|NM CCTGAATTGCAGAATCATCTACAACAACAACTGCTAAGCCCACATT-CATCCTATCCATT 710 720 730 740 750 760 790 800 810 820 830 840 BOVPRL TCTGAGATGGTTCTTAATGATCCATTCCCTGGCAAACTTCTCTGAGCTTTATAGCTTTGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: : ref|NM TCTGAGATGGTTCTTAATGATCCATTCCCTGGCAAACTTCTCTGAGCTTTATAGCTTTTT 770 780 790 800 810 820 850 860 870 880 890 900 BOVPRL AATGCATGCTTGGCTCTAATGGGTTTCATCTTAAATAAAAACAGACTCTGTAGCGATGTC :::::::::::::::::::::: :: ref|NM AATGCATGCTTGGCTCTAATGGTTT 830 840 >>ref|NM_001009306.1| Ovis aries prolactin ( (926 nt) initn: 3886 init1: 3886 opt: 3933 Z-score: 4111.8 bits: 772.1 E(8294009): 0 banded Smith-Waterman score: 3933; 94.8% identity (94.8% similar) in 870 nt overlap (31-900:58-926) 10 20 30 40 50 60 BOVPRL TGCTTGGCTGAGGAGCCATAGGACGAGAGCTTCCTGGTGAAGTGTGTTTCTTGAAATCAT : : ::::: : :::: :::: ref|NM AAACACACTTTCTGCGCTGAACCTTTGCTGTCCATGGTGGTGATGATTTCAAGAAACACA 30 40 50 60 70 80 70 80 90 100 110 120 BOVPRL CACCACCATGGACAGCAAAGGTTCGTCGCAGAAAGGGTCCCGCCTGCTCCTGCTGCTGGT : ::::: ::::::::::::::: :::::::::::::::::::::::::::::::::: ref|NM CTTCACCA-GGACAGCAAAGGTTCAGCGCAGAAAGGGTCCCGCCTGCTCCTGCTGCTGGT 90 100 110 120 130 140 130 140 150 160 170 180 BOVPRL GGTGTCAAATCTACTCTTGTGCCAGGGTGTGGTCTCCACCCCCGTCTGTCCCAATGGGCC ::::::::::::::::::::: :::::::::::::::::::: ::::::::::::::::: ref|NM GGTGTCAAATCTACTCTTGTGTCAGGGTGTGGTCTCCACCCCTGTCTGTCCCAATGGGCC 150 160 170 180 190 200 190 200 210 220 230 240 BOVPRL TGGCAACTGCCAGGTATCCCTTCGAGACCTGTTTGACCGGGCAGTCATGGTGTCCCACTA :::: :::: ::::: :::::::::::::::::::::::::::::::::::::::::::: ref|NM TGGCGACTGTCAGGTGTCCCTTCGAGACCTGTTTGACCGGGCAGTCATGGTGTCCCACTA 210 220 230 240 250 260 250 260 270 280 290 300 BOVPRL CATCCATGACCTCTCCTCGGAAATGTTCAACGAATTTGATAAACGGTATGCCCAGGGCAA ::: ::: :::::::::::::::::::::: :::::::::::: :::::::::::::::: ref|NM CATTCATAACCTCTCCTCGGAAATGTTCAATGAATTTGATAAAAGGTATGCCCAGGGCAA 270 280 290 300 310 320 310 320 330 340 350 360 BOVPRL AGGGTTCATTACCATGGCCCTCAACAGCTGCCATACCTCCTCCCTTCCTACCCCGGAAGA ::::::::::::::::::::::::::::::::: :::::::::::::::::::: ::::: ref|NM AGGGTTCATTACCATGGCCCTCAACAGCTGCCACACCTCCTCCCTTCCTACCCCTGAAGA 330 340 350 360 370 380 370 380 390 400 410 420 BOVPRL TAAAGAACAAGCCCAACAGACCCATCATGAAGTCCTTATGAGCTTGATTCTTGGGTTGCT ::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::: ref|NM CAAAGAACAAGCCCAACAGACCCACCATGAAGTCCTTATGAGCTTGATTCTTGGGTTGCT 390 400 410 420 430 440 430 440 450 460 470 480 BOVPRL GCGCTCCTGGAATGACCCTCTGTATCACCTAGTCACCGAGGTACGGGGTATGAAAGGAGC :::::::::::::::::::::::::::::::::::: ::::: :::::::::::::::: ref|NM GCGCTCCTGGAATGACCCTCTGTATCACCTAGTCACAGAGGTGCGGGGTATGAAAGGAGT 450 460 470 480 490 500 490 500 510 520 530 540 BOVPRL CCCAGATGCTATCCTATCGAGGGCCATAGAGATTGAGGAAGAAAACAAACGACTTCTGGA :::::::::::: ::::::::::: ::::::::::::::::::::::::::::::::::: ref|NM CCCAGATGCTATTCTATCGAGGGCTATAGAGATTGAGGAAGAAAACAAACGACTTCTGGA 510 520 530 540 550 560 550 560 570 580 590 600 BOVPRL AGGCATGGAGATGATATTTGGCCAGGTTATTCCTGGAGCCAAAGAGACTGAGCCCTACCC :::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::: ref|NM AGGCATGGAGATGATATTTGGCCAAGTTATTCCTGGAGCCAAAGAGACTGAGCCCTACCC 570 580 590 600 610 620 610 620 630 640 650 660 BOVPRL TGTGTGGTCAGGACTCCCGTCCCTGCAAACTAAGGATGAAGATGCACGTTATTCTGCTTT :::::::::::::::::: :::::::::::::::::::::::::::::: :::::::::: ref|NM TGTGTGGTCAGGACTCCCATCCCTGCAAACTAAGGATGAAGATGCACGTCATTCTGCTTT 630 640 650 660 670 680 670 680 690 700 710 720 BOVPRL TTATAACCTGCTCCACTGCCTGCGCAGGGATTCAAGCAAGATTGACACTTACCTTAAGCT ::: :::::::: ::::::::::::::::::::::::::::::::::::::::::::::: ref|NM TTACAACCTGCTTCACTGCCTGCGCAGGGATTCAAGCAAGATTGACACTTACCTTAAGCT 690 700 710 720 730 740 730 740 750 760 770 780 BOVPRL CCTGAATTGCAGAATCATCTACAACAACAACTGCTAAGCCCACATTCCATCCTATCCATT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|NM CCTGAATTGCAGAATCATCTACAACAACAACTGCTAAGCCCACATTCCATCCTATCCATT 750 760 770 780 790 800 790 800 810 820 830 840 BOVPRL TCTGAGATGGTTCTTAATGATCCATTCCCTGGCAAACTTCTCTGAGCTTTATAGCTTTGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: : ref|NM TCTGAGATGGTTCTTAATGATCCATTCCCTGGCAAACTTCTCTGAGCTTTATAGCTTTTT 810 820 830 840 850 860 850 860 870 880 890 900 BOVPRL AATGCATGCTTGGCTCTAATGGGTTTCATCTTAAATAAAAACAGACTCTGTAGCGATGTC ::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::: ref|NM AATGCATGCTTGGCTCTAATGGGTTTCATCTTAAATAAAAACAGACTCTGTAGAAATGTC 870 880 890 900 910 920 BOVPRL AAAATCT >>ref|XM_005976859.1| PREDICTED: Pantholops (865 nt) initn: 3225 init1: 3225 opt: 3859 Z-score: 4034.9 bits: 757.8 E(8294009): 1.2e-215 banded Smith-Waterman score: 4017; 96.4% identity (96.4% similar) in 864 nt overlap (53-907:1-863) 30 40 50 60 70 80 BOVPRL ACGAGAGCTTCCTGGTGAAGTGTGTTTCTTGAAATCATCACCACCATGGACAGCAAAGGT :::::::::::::::::::::::::::::: ref|XM GAAATCATCACCACCATGGACAGCAAAGGT 10 20 30 90 100 110 120 130 BOVPRL TCGTCGCAGAAAG---------GGTCCCGCCTGCTCCTGCTGCTGGTGGTGTCAAATCTA :: :::::::::: :::::::::::::::::::::::::::::::::::::: ref|XM TCATCGCAGAAAGGTATGTACAGGTCCCGCCTGCTCCTGCTGCTGGTGGTGTCAAATCTA 40 50 60 70 80 90 140 150 160 170 180 190 BOVPRL CTCTTGTGCCAGGGTGTGGTCTCCACCCCCGTCTGTCCCAATGGGCCTGGCAACTGCCAG :::::::: :::::::::: :::::::::::::::::::::::::::::::::::::::: ref|XM CTCTTGTGTCAGGGTGTGGCCTCCACCCCCGTCTGTCCCAATGGGCCTGGCAACTGCCAG 100 110 120 130 140 150 200 210 220 230 240 250 BOVPRL GTATCCCTTCGAGACCTGTTTGACCGGGCAGTCATGGTGTCCCACTACATCCATGACCTC :: ::::::::::::::::::::::::::::::::::::::::::::::::::: ::::: ref|XM GTGTCCCTTCGAGACCTGTTTGACCGGGCAGTCATGGTGTCCCACTACATCCATAACCTC 160 170 180 190 200 210 260 270 280 290 300 310 BOVPRL TCCTCGGAAATGTTCAACGAATTTGATAAACGGTATGCCCAGGGCAAAGGGTTCATTACC ::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::: ref|XM TCCTCGGAAATGTTCAACGAATTTGATAAACGGTACGCCCAGGGCAAAGGGTTCATTACC 220 230 240 250 260 270 320 330 340 350 360 370 BOVPRL ATGGCCCTCAACAGCTGCCATACCTCCTCCCTTCCTACCCCGGAAGATAAAGAACAAGCC ::::::::::::::::::::::::::::::::::::::::: ::::: :::::::::::: ref|XM ATGGCCCTCAACAGCTGCCATACCTCCTCCCTTCCTACCCCTGAAGACAAAGAACAAGCC 280 290 300 310 320 330 380 390 400 410 420 430 BOVPRL CAACAGACCCATCATGAAGTCCTTATGAGCTTGATTCTTGGGTTGCTGCGCTCCTGGAAT ::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::: ref|XM CAACAGACCCACCATGAAGTCCTTATGAGCTTGATTCTTGGGTTGCTGCGCTCCTGGAAT 340 350 360 370 380 390 440 450 460 470 480 490 BOVPRL GACCCTCTGTATCACCTAGTCACCGAGGTACGGGGTATGAAAGGAGCCCCAGATGCTATC ::::::::::::::::::::::: ::::: :::::::::::::::: ::::::::::::: ref|XM GACCCTCTGTATCACCTAGTCACAGAGGTGCGGGGTATGAAAGGAGTCCCAGATGCTATC 400 410 420 430 440 450 500 510 520 530 540 550 BOVPRL CTATCGAGGGCCATAGAGATTGAGGAAGAAAACAAACGACTTCTGGAAGGCATGGAGATG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|XM CTATCGAGGGCCATAGAGATTGAGGAAGAAAACAAACGACTTCTGGAAGGCATGGAGATG 460 470 480 490 500 510 560 570 580 590 600 610 BOVPRL ATATTTGGCCAGGTTATTCCTGGAGCCAAAGAGACTGAGCCCTACCCTGTGTGGTCAGGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|XM ATATTTGGCCAGGTTATTCCTGGAGCCAAAGAGACTGAGCCCTACCCTGTGTGGTCAGGA 520 530 540 550 560 570 620 630 640 650 660 670 BOVPRL CTCCCGTCCCTGCAAACTAAGGATGAAGATGCACGTTATTCTGCTTTTTATAACCTGCTC ::::: :: ::::::::::::::::::::::::::: ::::::::::::: ::::::::: ref|XM CTCCCATCTCTGCAAACTAAGGATGAAGATGCACGTCATTCTGCTTTTTACAACCTGCTC 580 590 600 610 620 630 680 690 700 710 720 730 BOVPRL CACTGCCTGCGCAGGGATTCAAGCAAGATTGACACTTACCTTAAGCTCCTGAATTGCAGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|XM CACTGCCTGCGCAGGGATTCAAGCAAGATTGACACTTACCTTAAGCTCCTGAATTGCAGA 640 650 660 670 680 690 740 750 760 770 780 790 BOVPRL ATCATCTACAACAACAACTGCTAAGCCCACATTCCATCCTATCCATTTCTGAGATGGTTC ::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::: ref|XM ATCATCTACAACAACAACTGCTAAGCCCACATT-CATCCTATCCATTTCTGAGATGGTTC 700 710 720 730 740 800 810 820 830 840 850 BOVPRL TTAATGATCCATTCCCTGGCAAACTTCTCTGAGCTTTATAGCTTTGTAATGCATGCTTGG ::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::: ref|XM TTAATGATCCATTCCCTGGCAAACTTCTCTGAGCTTTATAGCTTTTTAATGCATGCTTGG 750 760 770 780 790 800 860 870 880 890 900 BOVPRL CTCTAATGGGTTTCATCTTAAATAAAAACAGACTCTGTAGCGATGTCAAAATCT ::::::::::::::::::::::::::::::::::: ::: :::::::::::: ref|XM CTCTAATGGGTTTCATCTTAAATAAAAACAGACTCCATAGAAATGTCAAAATCTAA 810 820 830 840 850 860 >>ref|XM_004273529.1| PREDICTED: Orcinus or (901 nt) initn: 3176 init1: 2809 opt: 3320 Z-score: 3470.3 bits: 653.3 E(8294009): 3.2e-184 banded Smith-Waterman score: 3320; 86.4% identity (86.4% similar) in 889 nt overlap (23-907:12-899) 10 20 30 40 50 BOVPRL TGCTTGGCTGAGGAGCCATAGGACGAGAGCTTC-CTGGTGAAGTGTGTTTCTTGAAATCA :: ::: :::: :::::::::::::::: : ::::::: ref|XM GCTGTAGGACTACCAGATCTTCTCTGGTGAAGTGTGTTTTTCGAAATCA 10 20 30 40 60 70 80 90 100 110 BOVPRL TCACCACCATGGACAGCAAAGGTTCGTCGCAGAAAGGGTCCCGCCTGCTCCTGCTGCTGG ::::::::::::::: ::::::::: :: ::::::::::: : ::::::::::::: :: ref|XM TCACCACCATGGACAACAAAGGTTCATCACAGAAAGGGTCACTCCTGCTCCTGCTGTTGC 50 60 70 80 90 100 120 130 140 150 160 170 BOVPRL TGGTGTCAAATCTACTCTTGTGCCAGGGTGTGGTCTCCACCCCCGTCTGTCCCAATGGGC ::::::::::::: ::::::::: :: :::::: :::: ::: ::::::::: ::: ref|XM TGGTGTCAAATCTGCTCTTGTGCAAGAGTGTGGCCTCCCTTCCCATCTGTCCCAGCGGGG 110 120 130 140 150 160 180 190 200 210 220 230 BOVPRL CTGGCAACTGCCAGGTATCCCTTCGAGACCTGTTTGACCGGGCAGTCATGGTGTCCCACT ::: :::::::::::: ::::::::::::::::::::::: :::::::: ::::::::: ref|XM CTGTCAACTGCCAGGTGTCCCTTCGAGACCTGTTTGACCGCGCAGTCATCCTGTCCCACT 170 180 190 200 210 220 240 250 260 270 280 290 BOVPRL ACATCCATGACCTCTCCTCGGAAATGTTCAACGAATTTGATAAACGGTATGCCCAGGGCA :::::::: :::::::::::::::::::::::::::::::::::::::: :: ::::::: ref|XM ACATCCATAACCTCTCCTCGGAAATGTTCAACGAATTTGATAAACGGTACGCTCAGGGCA 230 240 250 260 270 280 300 310 320 330 340 350 BOVPRL AAGGGTTCATTACCATGGCCCTCAACAGCTGCCATACCTCCTCCCTTCCTACCCCGGAAG :::::::::::::: ::: ::::::::::::: ::::::::::: : ::::: :::: ref|XM GAGGGTTCATTACCAAGGCTATCAACAGCTGCCACACCTCCTCCCTCTCCACCCCTGAAG 290 300 310 320 330 340 360 370 380 390 400 410 BOVPRL ATAAAGAACAAGCCCAACAGACCCATCATGAAGTCCTTATGAGCTTGATTCTTGGGTTGC : :::::::::::::::::: :::::::::::::::: ::::: :::: ::::: ::: ref|XM ACAAAGAACAAGCCCAACAGGTCCATCATGAAGTCCTTCTGAGCATGATCCTTGGCGTGC 350 360 370 380 390 400 420 430 440 450 460 470 BOVPRL TGCGCTCCTGGAATGACCCTCTGTATCACCTAGTCACCGAGGTACGGGGTATGAAAGGAG ::::::::::::::::::::::::: ::::: ::::: ::::: ::::::::: ::: :: ref|XM TGCGCTCCTGGAATGACCCTCTGTACCACCTGGTCACTGAGGTGCGGGGTATGCAAGAAG 410 420 430 440 450 460 480 490 500 510 520 530 BOVPRL CCCCAGATGCTATCCTATCGAGGGCCATAGAGATTGAGGAAGAAAACAAACGACTTCTGG ::::::: ::::::::::: :: :::::::::::::::::: : :::::::::::::: : ref|XM CCCCAGAGGCTATCCTATCAAGAGCCATAGAGATTGAGGAACAGAACAAACGACTTCTAG 470 480 490 500 510 520 540 550 560 570 580 590 BOVPRL AAGGCATGGAGATGATATTTGGCCAGGTTATTCCTGGAGCCAAAGAGACTGAGCCCTACC :::::::::::: :::: ::::::::::: :::::::: ::: :::: :::: :::: ref|XM AAGGCATGGAGAAGATAGTTGGCCAGGTTCATCCTGGAGTCAAGGAGAATGAGGTCTACT 530 540 550 560 570 580 600 610 620 630 640 650 BOVPRL CTGTGTGGTCAGGACTCCCGTCCCTGCAAACTAAGGATGAAGATGCACGTTATTCTGCTT : :::::::: ::::: :: :::::::: : ::::::::: : :: :: ::::: ref|XM CGGTGTGGTCGGGACTTCCATCCCTGCAGATGGCCGATGAAGATACGCGCCTTTTTGCTT 590 600 610 620 630 640 660 670 680 690 700 710 BOVPRL TTTATAACCTGCTCCACTGCCTGCGCAGGGATTCAAGCAAGATTGACACTTACCTTAAGC :::::::::::::::::::::: :::::::::::: :::::::::: ::: :: :::: ref|XM TTTATAACCTGCTCCACTGCCTACGCAGGGATTCACATAAGATTGACAGTTATCTCAAGC 650 660 670 680 690 700 720 730 740 750 760 770 BOVPRL TCCTGAATTGCAGAATCATCTACAACAACAACTGCTAAGCCCACATTCCATCCTATCCAT ::::::: ::: ::::::::::: ::: ::::::::::::::::: :::: : :: ::: ref|XM TCCTGAAGTGCCGAATCATCTACGACAGCAACTGCTAAGCCCACA-GCCATTCCATTCAT 710 720 730 740 750 760 780 790 800 810 820 830 BOVPRL TTCTGAGATGGTTCTTAATGATCCATTCCCTGGCAAACTTCTCTGAGCTTTATAGCTTTG :::::::::::::::::::::::::: :: : ::: ::::: : :: ::::::::::: ref|XM TTCTGAGATGGTTCTTAATGATCCATCCCATAGCAGTCTTCTTTTAGTTTTATAGCTTTT 770 780 790 800 810 820 840 850 860 870 880 890 BOVPRL TAATGCATGCTTGGCTCTAATGGGTTTCATCTT---AAATAAAAACAGACTCTGTAGCGA :::::::::::::: : :::::::: ::::::: :::::::::::::::: :: :: ref|XM TAATGCATGCTTGGGTGTAATGGGTCTCATCTTAAAAAATAAAAACAGACTCCACAGAGA 830 840 850 860 870 880 900 BOVPRL TGTCAAAATCT ::::::::::: ref|XM TGTCAAAATCTAA 890 900 >>ref|XM_007116323.1| PREDICTED: Physeter c (896 nt) initn: 3172 init1: 2805 opt: 3318 Z-score: 3468.3 bits: 653.0 E(8294009): 4.2e-184 banded Smith-Waterman score: 3318; 86.3% identity (86.3% similar) in 888 nt overlap (23-907:8-894) 10 20 30 40 50 60 BOVPRL TGCTTGGCTGAGGAGCCATAGGACGAGAGCTTCCTGGTGAAGTGTGTTTCTTGAAATCAT :: ::: :: :::::::::::::::: : :::::::: ref|XM TAGGACTACCAGATCTCTCTGGTGAAGTGTGTTTTTCGAAATCAT 10 20 30 40 70 80 90 100 110 120 BOVPRL CACCACCATGGACAGCAAAGGTTCGTCGCAGAAAGGGTCCCGCCTGCTCCTGCTGCTGGT :::::::::::::: ::::::::: :: ::::::::::: : ::::::::::::: :: : ref|XM CACCACCATGGACAACAAAGGTTCATCACAGAAAGGGTCACTCCTGCTCCTGCTGTTGCT 50 60 70 80 90 100 130 140 150 160 170 180 BOVPRL GGTGTCAAATCTACTCTTGTGCCAGGGTGTGGTCTCCACCCCCGTCTGTCCCAATGGGCC : :::::::::: ::::::::: :: : :::: :::: ::: ::::::::: ::: : ref|XM GATGTCAAATCTGCTCTTGTGCAAGAGCGTGGCCTCCCTTCCCATCTGTCCCAGCGGGGC 110 120 130 140 150 160 190 200 210 220 230 240 BOVPRL TGGCAACTGCCAGGTATCCCTTCGAGACCTGTTTGACCGGGCAGTCATGGTGTCCCACTA :: :::::::::::: ::::::::::::::::::::::: :::::::: :::::::::: ref|XM TGTCAACTGCCAGGTGTCCCTTCGAGACCTGTTTGACCGCGCAGTCATCCTGTCCCACTA 170 180 190 200 210 220 250 260 270 280 290 300 BOVPRL CATCCATGACCTCTCCTCGGAAATGTTCAACGAATTTGATAAACGGTATGCCCAGGGCAA ::::::: :::::::::::::::::::::::::::::::::::::::: :::::::::: ref|XM CATCCATAACCTCTCCTCGGAAATGTTCAACGAATTTGATAAACGGTACGCCCAGGGCAG 230 240 250 260 270 280 310 320 330 340 350 360 BOVPRL AGGGTTCATTACCATGGCCCTCAACAGCTGCCATACCTCCTCCCTTCCTACCCCGGAAGA :::::::::::::: ::: ::::::::::::: ::::::::::: : ::::: ::::: ref|XM AGGGTTCATTACCAAGGCTATCAACAGCTGCCACACCTCCTCCCTCTCCACCCCTGAAGA 290 300 310 320 330 340 370 380 390 400 410 420 BOVPRL TAAAGAACAAGCCCAACAGACCCATCATGAAGTCCTTATGAGCTTGATTCTTGGGTTGCT :::::::::::::::::: :::::::::::::::: ::::: :::: ::::: :::: ref|XM CAAAGAACAAGCCCAACAGGTCCATCATGAAGTCCTTCTGAGCATGATCCTTGGAGTGCT 350 360 370 380 390 400 430 440 450 460 470 480 BOVPRL GCGCTCCTGGAATGACCCTCTGTATCACCTAGTCACCGAGGTACGGGGTATGAAAGGAGC :::::: ::::::::::::::::: ::::: ::::: ::::: ::::::::: ::: ::: ref|XM GCGCTCTTGGAATGACCCTCTGTACCACCTGGTCACGGAGGTGCGGGGTATGCAAGAAGC 410 420 430 440 450 460 490 500 510 520 530 540 BOVPRL CCCAGATGCTATCCTATCGAGGGCCATAGAGATTGAGGAAGAAAACAAACGACTTCTGGA :::::::::::::::::: :: :::::::::::::::::: : :::::::::::::: :: ref|XM CCCAGATGCTATCCTATCAAGAGCCATAGAGATTGAGGAACAGAACAAACGACTTCTAGA 470 480 490 500 510 520 550 560 570 580 590 600 BOVPRL AGGCATGGAGATGATATTTGGCCAGGTTATTCCTGGAGCCAAAGAGACTGAGCCCTACCC ::::::::::: :::: ::::::::::: :::::::: ::: :::: :::: :::: : ref|XM AGGCATGGAGAAGATAGTTGGCCAGGTTCATCCTGGAGTCAAGGAGAATGAGGTCTACTC 530 540 550 560 570 580 610 620 630 640 650 660 BOVPRL TGTGTGGTCAGGACTCCCGTCCCTGCAAACTAAGGATGAAGATGCACGTTATTCTGCTTT :::::::: ::::: :: :::::::: : ::::::::: : :: :: :::::: ref|XM CGTGTGGTCGGGACTTCCATCCCTGCAGATGGCCGATGAAGATACGCGCCTTTTTGCTTT 590 600 610 620 630 640 670 680 690 700 710 720 BOVPRL TTATAACCTGCTCCACTGCCTGCGCAGGGATTCAAGCAAGATTGACACTTACCTTAAGCT ::::::::::::::::::::: :::::::::::: :::::::::: ::: :: ::::: ref|XM TTATAACCTGCTCCACTGCCTACGCAGGGATTCACATAAGATTGACAGTTATCTCAAGCT 650 660 670 680 690 700 730 740 750 760 770 780 BOVPRL CCTGAATTGCAGAATCATCTACAACAACAACTGCTAAGCCCACATTCCATCCTATCCATT :::::: ::: ::::::::::: ::: ::::::::::::::::: ::::: : :: :::: ref|XM CCTGAAGTGCCGAATCATCTACGACAGCAACTGCTAAGCCCACA-TCCATTCCATTCATT 710 720 730 740 750 760 790 800 810 820 830 840 BOVPRL TCTGAGATGGTTCTTAATGATCCATTCCCTGGCAAACTTCTCTGAGCTTTATAGCTTTGT ::::::::::::::::::::::::: :: : ::: ::::: : :: ::::::::::: : ref|XM TCTGAGATGGTTCTTAATGATCCATCCCATAGCAGTCTTCTTTTAGTTTTATAGCTTTTT 770 780 790 800 810 820 850 860 870 880 890 BOVPRL AATGCATGCTTGGCTCTAATGGGTTTCATCTT---AAATAAAAACAGACTCTGTAGCGAT ::::::::::::: : :::::::: ::::::: :::::::::::::::: :: ::: ref|XM AATGCATGCTTGGGTGTAATGGGTCTCATCTTAAAAAATAAAAACAGACTCCACAGAGAT 830 840 850 860 870 880 900 BOVPRL GTCAAAATCT :::::::::: ref|XM GTCAAAATCTAA 890 >>ref|XM_007447055.1| PREDICTED: Lipotes ve (897 nt) initn: 3157 init1: 2799 opt: 3311 Z-score: 3460.9 bits: 651.6 E(8294009): 1.1e-183 banded Smith-Waterman score: 3311; 86.3% identity (86.3% similar) in 889 nt overlap (23-907:8-895) 10 20 30 40 50 BOVPRL TGCTTGGCTGAGGAGCCATAGGACGAGAGCTTC-CTGGTGAAGTGTGTTTCTTGAAATCA :: ::: :::: :::::::::::::::: : ::::::: ref|XM TAGGACTACCAGATCTTCTCTGGTGAAGTGTGTTTTTCGAAATCA 10 20 30 40 60 70 80 90 100 110 BOVPRL TCACCACCATGGACAGCAAAGGTTCGTCGCAGAAAGGGTCCCGCCTGCTCCTGCTGCTGG ::::::::::::::: ::::::::: :: ::::::::::: : ::::::::::::: :: ref|XM TCACCACCATGGACAACAAAGGTTCATCACAGAAAGGGTCACTCCTGCTCCTGCTGTTGC 50 60 70 80 90 100 120 130 140 150 160 170 BOVPRL TGGTGTCAAATCTACTCTTGTGCCAGGGTGTGGTCTCCACCCCCGTCTGTCCCAATGGGC ::::::::::::: ::::::::: :: :::::: :::: ::: ::::::::: ::: ref|XM TGGTGTCAAATCTGCTCTTGTGCAAGAGTGTGGCCTCCCTTCCCATCTGTCCCAGCGGGG 110 120 130 140 150 160 180 190 200 210 220 230 BOVPRL CTGGCAACTGCCAGGTATCCCTTCGAGACCTGTTTGACCGGGCAGTCATGGTGTCCCACT ::: :::::::::::: ::::::::::::::::::::::: :::::::: ::::::::: ref|XM CTGTCAACTGCCAGGTGTCCCTTCGAGACCTGTTTGACCGCGCAGTCATCCTGTCCCACT 170 180 190 200 210 220 240 250 260 270 280 290 BOVPRL ACATCCATGACCTCTCCTCGGAAATGTTCAACGAATTTGATAAACGGTATGCCCAGGGCA :::::::: :::::::::::::::::::::::::::::::::::::::: :::::::::: ref|XM ACATCCATAACCTCTCCTCGGAAATGTTCAACGAATTTGATAAACGGTACGCCCAGGGCA 230 240 250 260 270 280 300 310 320 330 340 350 BOVPRL AAGGGTTCATTACCATGGCCCTCAACAGCTGCCATACCTCCTCCCTTCCTACCCCGGAAG :::::::::::::: ::: ::::::::::::: ::::::::::: : ::::: :::: ref|XM GAGGGTTCATTACCAAGGCTATCAACAGCTGCCACACCTCCTCCCTCTCCACCCCTGAAG 290 300 310 320 330 340 360 370 380 390 400 410 BOVPRL ATAAAGAACAAGCCCAACAGACCCATCATGAAGTCCTTATGAGCTTGATTCTTGGGTTGC : :::::::::::::::::: :::::::::::::::: ::::: :::: ::::: ::: ref|XM ACAAAGAACAAGCCCAACAGGTCCATCATGAAGTCCTTCTGAGCATGATCCTTGGCGTGC 350 360 370 380 390 400 420 430 440 450 460 470 BOVPRL TGCGCTCCTGGAATGACCCTCTGTATCACCTAGTCACCGAGGTACGGGGTATGAAAGGAG :::::::::::::::::::::: :: ::::: ::::: ::::: ::::::::: ::: :: ref|XM TGCGCTCCTGGAATGACCCTCTCTACCACCTGGTCACTGAGGTGCGGGGTATGCAAGAAG 410 420 430 440 450 460 480 490 500 510 520 530 BOVPRL CCCCAGATGCTATCCTATCGAGGGCCATAGAGATTGAGGAAGAAAACAAACGACTTCTGG ::::::::::::::::::: :: :::::::::::::::::: : :::::::::::::: : ref|XM CCCCAGATGCTATCCTATCAAGAGCCATAGAGATTGAGGAACAGAACAAACGACTTCTAG 470 480 490 500 510 520 540 550 560 570 580 590 BOVPRL AAGGCATGGAGATGATATTTGGCCAGGTTATTCCTGGAGCCAAAGAGACTGAGCCCTACC :::::::::::: :::: ::::::::::: :::::::: ::: :::: :::: :::: ref|XM AAGGCATGGAGAAGATAGTTGGCCAGGTTCATCCTGGAGTCAAGGAGAATGAGGTCTACT 530 540 550 560 570 580 600 610 620 630 640 650 BOVPRL CTGTGTGGTCAGGACTCCCGTCCCTGCAAACTAAGGATGAAGATGCACGTTATTCTGCTT : :::::::: ::::: :: :::::::: : ::::::::: : :: :: ::::: ref|XM CCGTGTGGTCGGGACTTCCATCCCTGCAGATGGCCGATGAAGATACGCGCCTTTTTGCTT 590 600 610 620 630 640 660 670 680 690 700 710 BOVPRL TTTATAACCTGCTCCACTGCCTGCGCAGGGATTCAAGCAAGATTGACACTTACCTTAAGC :::::::::::::::::::::: :::::::::::: :::::::::: ::: :: :::: ref|XM TTTATAACCTGCTCCACTGCCTACGCAGGGATTCACATAAGATTGACAGTTATCTCAAGC 650 660 670 680 690 700 720 730 740 750 760 770 BOVPRL TCCTGAATTGCAGAATCATCTACAACAACAACTGCTAAGCCCACATTCCATCCTATCCAT ::::::: ::: ::::: ::::: ::: ::::::::::::::: : ::::: : :: ::: ref|XM TCCTGAAGTGCCGAATCGTCTACGACAGCAACTGCTAAGCCCATA-TCCATTCCATTCAT 710 720 730 740 750 760 780 790 800 810 820 830 BOVPRL TTCTGAGATGGTTCTTAATGATCCATTCCCTGGCAAACTTCTCTGAGCTTTATAGCTTTG :::::::: ::::::::::::::::: :: : ::: ::::: : :: ::::::::::: ref|XM TTCTGAGACGGTTCTTAATGATCCATCCCATAGCAGTCTTCTTTTAGTTTTATAGCTTTT 770 780 790 800 810 820 840 850 860 870 880 890 BOVPRL TAATGCATGCTTGGCTCTAATGGGTTTCATCTT---AAATAAAAACAGACTCTGTAGCGA :::::::::::::: : :::::::: ::::::: :::::::::::::::: :: :: ref|XM TAATGCATGCTTGGGTATAATGGGTCTCATCTTAAAAAATAAAAACAGACTCCACAGAGA 830 840 850 860 870 880 900 BOVPRL TGTCAAAATCT ::::::::::: ref|XM TGTCAAAATCTAA 890 >>ref|XM_004317251.1| PREDICTED: Tursiops t (899 nt) initn: 2817 init1: 2817 opt: 3301 Z-score: 3450.4 bits: 649.7 E(8294009): 4.2e-183 banded Smith-Waterman score: 3301; 86.2% identity (86.2% similar) in 887 nt overlap (23-907:12-897) 10 20 30 40 50 BOVPRL TGCTTGGCTGAGGAGCCATAGGACGAGAGCTTC-CTGGTGAAGTGTGTTTCTTGAAATCA :: ::: :::: :::::::::::::::: : ::::::: ref|XM GCTGTAGGACTACCAGATCTTCTCTGGTGAAGTGTGTTTTTCGAAATCA 10 20 30 40 60 70 80 90 100 110 BOVPRL TCACCACCATGGACAGCAAAGGTTCGTCGCAGAAAGGGTCCCGCCTGCTCCTGCTGCTGG ::::::::::::::: ::::::::: :: ::::::::::: : ::::::::::::: :: ref|XM TCACCACCATGGACAACAAAGGTTCATCACAGAAAGGGTCACTCCTGCTCCTGCTGTTGC 50 60 70 80 90 100 120 130 140 150 160 170 BOVPRL TGGTGTCAAATCTACTCTTGTGCCAGGGTGTGGTCTCCACCCCCGTCTGTCCCAATGGGC ::::::::::::: ::::::::: :: :::::: :::: ::: ::::::::: ::: ref|XM TGGTGTCAAATCTGCTCTTGTGCAAGAGTGTGGCCTCCCTTCCCATCTGTCCCAGCGGGG 110 120 130 140 150 160 180 190 200 210 220 230 BOVPRL CTGGCAACTGCCAGGTATCCCTTCGAGACCTGTTTGACCGGGCAGTCATGGTGTCCCACT ::: :::::::::::: ::::::::::::::::::::::: :::::::: ::::::::: ref|XM CTGTCAACTGCCAGGTGTCCCTTCGAGACCTGTTTGACCGCGCAGTCATCCTGTCCCACT 170 180 190 200 210 220 240 250 260 270 280 290 BOVPRL ACATCCATGACCTCTCCTCGGAAATGTTCAACGAATTTGATAAACGGTATGCCCAGGGCA :::::::: :::::::::::::::::::::::::::::::::::::::: :::::::::: ref|XM ACATCCATAACCTCTCCTCGGAAATGTTCAACGAATTTGATAAACGGTACGCCCAGGGCA 230 240 250 260 270 280 300 310 320 330 340 350 BOVPRL AAGGGTTCATTACCATGGCCCTCAACAGCTGCCATACCTCCTCCCTTCCTACCCCGGAAG :::::::::::::: ::: ::::::::::::: ::::::::::: : ::::: :::: ref|XM GAGGGTTCATTACCAAGGCTATCAACAGCTGCCACACCTCCTCCCTCTCCACCCCTGAAG 290 300 310 320 330 340 360 370 380 390 400 410 BOVPRL ATAAAGAACAAGCCCAACAGACCCATCATGAAGTCCTTATGAGCTTGATTCTTGGGTTGC : :::::::::::::::::: :::::::::::::::: ::::: :::: ::::: ::: ref|XM ACAAAGAACAAGCCCAACAGGTCCATCATGAAGTCCTTCTGAGCATGATCCTTGGCGTGC 350 360 370 380 390 400 420 430 440 450 460 470 BOVPRL TGCGCTCCTGGAATGACCCTCTGTATCACCTAGTCACCGAGGTACGGGGTATGAAAGGAG ::::::::::::::::::::::::: ::::: ::::: ::::: ::::::::: ::: :: ref|XM TGCGCTCCTGGAATGACCCTCTGTACCACCTGGTCACTGAGGTGCGGGGTATGCAAGAAG 410 420 430 440 450 460 480 490 500 510 520 530 BOVPRL CCCCAGATGCTATCCTATCGAGGGCCATAGAGATTGAGGAAGAAAACAAACGACTTCTGG ::::::: :::::::::: :: :::::::::::::::::: : :::::::::::::: : ref|XM CCCCAGAGTCTATCCTATCAAGAGCCATAGAGATTGAGGAACAGAACAAACGACTTCTAG 470 480 490 500 510 520 540 550 560 570 580 590 BOVPRL AAGGCATGGAGATGATATTTGGCCAGGTTATTCCTGGAGCCAAAGAGACTGAGCCCTACC :::::::::::: :::: ::::::::::: :::::::: ::: :::: :::: :::: ref|XM AAGGCATGGAGAAGATAGTTGGCCAGGTTCATCCTGGAGTCAAGGAGAATGAGGTCTACT 530 540 550 560 570 580 600 610 620 630 640 650 BOVPRL CTGTGTGGTCAGGACTCCCGTCCCTGCAAACTAAGGATGAAGATGCACGTTATTCTGCTT : :::::::: ::::: :: :::::::: : ::::::::: : :: :: ::::: ref|XM CGGTGTGGTCGGGACTTCCATCCCTGCAGATGGCCGATGAAGATACGCGCCTTTTTGCTT 590 600 610 620 630 640 660 670 680 690 700 710 BOVPRL TTTATAACCTGCTCCACTGCCTGCGCAGGGATTCAAGCAAGATTGACACTTACCTTAAGC :::::::::::::::::::::: :::::::::::: :::::::::: ::: :: :::: ref|XM TTTATAACCTGCTCCACTGCCTACGCAGGGATTCACATAAGATTGACAGTTATCTCAAGC 650 660 670 680 690 700 720 730 740 750 760 770 BOVPRL TCCTGAATTGCAGAATCATCTACAACAACAACTGCTAAGCCCACATTCCATCCTATCCAT ::::::: ::: ::::::::::: ::: ::::::::::::::::: :::: : :: ::: ref|XM TCCTGAAGTGCCGAATCATCTACGACAGCAACTGCTAAGCCCACA-GCCATTCCATTCAT 710 720 730 740 750 760 780 790 800 810 820 830 BOVPRL TTCTGAGATGGTTCTTAATGATCCATTCCCTGGCAAACTTCTCTGAGCTTTATAGCTTTG :::::::::::::::::::::::::: :: : ::: ::::: : :: ::::::::::: ref|XM TTCTGAGATGGTTCTTAATGATCCATCCCATAGCAGTCTTCTTTTAGTTTTATAGCTTTT 770 780 790 800 810 820 840 850 860 870 880 890 BOVPRL TAATGCATGCTTGGCTCTAATGGGTTTCATCTTAAATAA-AAACAGACTCTGTAGCGATG ::::::::::::: : :::::::: :::::::::: :: ::: :::::: :: :::: ref|XM GAATGCATGCTTGGGTGTAATGGGTCTCATCTTAAAAAATAAAAAGACTCCACAGAGATG 830 840 850 860 870 880 900 BOVPRL TCAAAATCT ::::::::: ref|XM TCAAAATCTAA 890 >>ref|XM_007197144.1| PREDICTED: Balaenopte (894 nt) initn: 2990 init1: 2823 opt: 3281 Z-score: 3429.5 bits: 645.8 E(8294009): 6.1e-182 banded Smith-Waterman score: 3281; 86.1% identity (86.1% similar) in 889 nt overlap (23-907:8-892) 10 20 30 40 50 BOVPRL TGCTTGGCTGAGGAGCCATAGGACGAGAGCTTC-CTGGTGAAGTGTGTTTCTTGAAATCA :: ::: :::: :::::::::::::::: : ::::::: ref|XM TAGGACTACCAGATCTTCTCTGGTGAAGTGTGTTTTTCGAAATCA 10 20 30 40 60 70 80 90 100 110 BOVPRL TCACCACCATGGACAGCAAAGGTTCGTCGCAGAAAGGGTCCCGCCTGCTCCTGCTGCTGG ::::::::::::::::::::::::: :: ::::::::::: : ::::::::::::: :: ref|XM TCACCACCATGGACAGCAAAGGTTCATCACAGAAAGGGTCACTCCTGCTCCTGCTGTTGC 50 60 70 80 90 100 120 130 140 150 160 170 BOVPRL TGGTGTCAAATCTACTCTTGTGCCAGGGTGTGGTCTCCACCCCCGTCTGTCCCAATGGGC ::::::::::::: ::::::::: :: : :::: :::: ::: ::::::::: ::: ref|XM TGGTGTCAAATCTCCTCTTGTGCAAGAGCGTGGCCTCCCTTCCCATCTGTCCCAGCGGGG 110 120 130 140 150 160 180 190 200 210 220 230 BOVPRL CTGGCAACTGCCAGGTATCCCTTCGAGACCTGTTTGACCGGGCAGTCATGGTGTCCCACT ::: :::::::::::: ::::::::::::::::::::::: :::::::: :::: :::: ref|XM CTGTCAACTGCCAGGTGTCCCTTCGAGACCTGTTTGACCGCGCAGTCATCCTGTCTCACT 170 180 190 200 210 220 240 250 260 270 280 290 BOVPRL ACATCCATGACCTCTCCTCGGAAATGTTCAACGAATTTGATAAACGGTATGCCCAGGGCA :::::::: :::::::::::::::::::::::::::::::::::::::: :::::::::: ref|XM ACATCCATAACCTCTCCTCGGAAATGTTCAACGAATTTGATAAACGGTACGCCCAGGGCA 230 240 250 260 270 280 300 310 320 330 340 350 BOVPRL AAGGGTTCATTACCATGGCCCTCAACAGCTGCCATACCTCCTCCCTTCCTACCCCGGAAG :::::::::::::: :::: ::::::::::::: ::::::::::: : ::::: :::: ref|XM GAGGGTTCATTACCAAGGCCATCAACAGCTGCCACACCTCCTCCCTCTCCACCCCTGAAG 290 300 310 320 330 340 360 370 380 390 400 410 BOVPRL ATAAAGAACAAGCCCAACAGACCCATCATGAAGTCCTTATGAGCTTGATTCTTGGGTTGC : :::::::::::::::::: :::::: ::::::::: ::::: :::: :: :: ::: ref|XM ACAAAGAACAAGCCCAACAGGTCCATCACGAAGTCCTTCTGAGCGTGATCCTGGGAGTGC 350 360 370 380 390 400 420 430 440 450 460 470 BOVPRL TGCGCTCCTGGAATGACCCTCTGTATCACCTAGTCACCGAGGTACGGGGTATGAAAGGAG ::::::::::::::::::::::::: ::::: ::::: ::::: ::::::::: ::: :: ref|XM TGCGCTCCTGGAATGACCCTCTGTACCACCTGGTCACGGAGGTGCGGGGTATGCAAGAAG 410 420 430 440 450 460 480 490 500 510 520 530 BOVPRL CCCCAGATGCTATCCTATCGAGGGCCATAGAGATTGAGGAAGAAAACAAACGACTTCTGG ::::::: ::::::::::: :: :::::::::::::::::: : :::::::::::::::: ref|XM CCCCAGACGCTATCCTATCAAGAGCCATAGAGATTGAGGAACAGAACAAACGACTTCTGG 470 480 490 500 510 520 540 550 560 570 580 590 BOVPRL AAGGCATGGAGATGATATTTGGCCAGGTTATTCCTGGAGCCAAAGAGACTGAGCCCTACC :::::::::::: :::: ::::::::::: :::::::: ::: :::: :::: :::: ref|XM AAGGCATGGAGAAGATAGTTGGCCAGGTTCATCCTGGAGTCAAGGAGAATGAGGTCTACT 530 540 550 560 570 580 600 610 620 630 640 650 BOVPRL CTGTGTGGTCAGGACTCCCGTCCCTGCAAACTAAGGATGAAGATGCACGTTATTCTGCTT : :::::::: ::::: ::::::::::: : ::::::::: : :: :: ::::: ref|XM CCGTGTGGTCGGGACTTCCGTCCCTGCAGATGGCCGATGAAGATACGCGCCTTTTTGCTT 590 600 610 620 630 640 660 670 680 690 700 710 BOVPRL TTTATAACCTGCTCCACTGCCTGCGCAGGGATTCAAGCAAGATTGACACTTACCTTAAGC :::::::::::::::::::::: :::::::::::: :::::::::: ::: :: :::: ref|XM TTTATAACCTGCTCCACTGCCTACGCAGGGATTCACATAAGATTGACAGTTATCTCAAGC 650 660 670 680 690 700 720 730 740 750 760 770 BOVPRL TCCTGAATTGCAGAATCATCTACAACAACAACTGCTAAGCCCACATTCCATCCTATCCAT ::::::: ::: ::::::::::: ::: ::::::::::::::::: ::::: : :: ::: ref|XM TCCTGAAGTGCCGAATCATCTACGACAGCAACTGCTAAGCCCACA-TCCATTCCATTCAT 710 720 730 740 750 760 780 790 800 810 820 830 BOVPRL TTCTGAGATGGTTCTTAATGATCCATTCCCTGGCAAACTTCTCTGAGCTTTATAGCTTTG :::::::::::::::::::::::::: :: : ::: ::: : :: :::::::::: ref|XM TTCTGAGATGGTTCTTAATGATCCATCCCATAGCAGGCTT---TTAGTGTTATAGCTTTT 770 780 790 800 810 820 840 850 860 870 880 890 BOVPRL TAATGCATGCTTGGCTCTAATGGGTTTCATCTT---AAATAAAAACAGACTCTGTAGCGA :::::::::::::: : ::: ::: ::::::: :::::::::::::::: :: :: ref|XM TAATGCATGCTTGGGTGTAACGGGCCTCATCTTAAAAAATAAAAACAGACTCCACAGAGA 830 840 850 860 870 880 900 BOVPRL TGTCAAAATCT ::::::::::: ref|XM TGTCAAAATCTAA 890 >>ref|XM_007116322.1| PREDICTED: Physeter c (893 nt) initn: 2917 init1: 2550 opt: 3274 Z-score: 3422.2 bits: 644.4 E(8294009): 1.6e-181 banded Smith-Waterman score: 3274; 85.9% identity (85.9% similar) in 887 nt overlap (23-903:8-893) 10 20 30 40 50 60 BOVPRL TGCTTGGCTGAGGAGCCATAGGACGAGAGCTTCCTGGTGAAGTGTGTTTCTTGAAATCAT :: ::: :: :::::::::::::::: : :::::::: ref|XM TAGGACTACCAGATCTCTCTGGTGAAGTGTGTTTTTCGAAATCAT 10 20 30 40 70 80 90 100 110 BOVPRL CACCACCATGGACAGCAAAGGTTCGTCGCAGAA---AGGGTCCCGCCTGCTCCTGCTGCT :::::::::::::: ::::::::: :: ::::: :::::: : ::::::::::::: : ref|XM CACCACCATGGACAACAAAGGTTCATCACAGAAAGCAGGGTCACTCCTGCTCCTGCTGTT 50 60 70 80 90 100 120 130 140 150 160 170 BOVPRL GGTGGTGTCAAATCTACTCTTGTGCCAGGGTGTGGTCTCCACCCCCGTCTGTCCCAATGG : :: :::::::::: ::::::::: :: : :::: :::: ::: ::::::::: :: ref|XM GCTGATGTCAAATCTGCTCTTGTGCAAGAGCGTGGCCTCCCTTCCCATCTGTCCCAGCGG 110 120 130 140 150 160 180 190 200 210 220 230 BOVPRL GCCTGGCAACTGCCAGGTATCCCTTCGAGACCTGTTTGACCGGGCAGTCATGGTGTCCCA : ::: :::::::::::: ::::::::::::::::::::::: :::::::: ::::::: ref|XM GGCTGTCAACTGCCAGGTGTCCCTTCGAGACCTGTTTGACCGCGCAGTCATCCTGTCCCA 170 180 190 200 210 220 240 250 260 270 280 290 BOVPRL CTACATCCATGACCTCTCCTCGGAAATGTTCAACGAATTTGATAAACGGTATGCCCAGGG :::::::::: :::::::::::::::::::::::::::::::::::::::: :::::::: ref|XM CTACATCCATAACCTCTCCTCGGAAATGTTCAACGAATTTGATAAACGGTACGCCCAGGG 230 240 250 260 270 280 300 310 320 330 340 350 BOVPRL CAAAGGGTTCATTACCATGGCCCTCAACAGCTGCCATACCTCCTCCCTTCCTACCCCGGA :: :::::::::::::: ::: ::::::::::::: ::::::::::: : ::::: :: ref|XM CAGAGGGTTCATTACCAAGGCTATCAACAGCTGCCACACCTCCTCCCTCTCCACCCCTGA 290 300 310 320 330 340 360 370 380 390 400 410 BOVPRL AGATAAAGAACAAGCCCAACAGACCCATCATGAAGTCCTTATGAGCTTGATTCTTGGGTT ::: :::::::::::::::::: :::::::::::::::: ::::: :::: ::::: : ref|XM AGACAAAGAACAAGCCCAACAGGTCCATCATGAAGTCCTTCTGAGCATGATCCTTGGAGT 350 360 370 380 390 400 420 430 440 450 460 470 BOVPRL GCTGCGCTCCTGGAATGACCCTCTGTATCACCTAGTCACCGAGGTACGGGGTATGAAAGG ::::::::: ::::::::::::::::: ::::: ::::: ::::: ::::::::: ::: ref|XM GCTGCGCTCTTGGAATGACCCTCTGTACCACCTGGTCACGGAGGTGCGGGGTATGCAAGA 410 420 430 440 450 460 480 490 500 510 520 530 BOVPRL AGCCCCAGATGCTATCCTATCGAGGGCCATAGAGATTGAGGAAGAAAACAAACGACTTCT ::::::::::::::::::::: :: :::::::::::::::::: : :::::::::::::: ref|XM AGCCCCAGATGCTATCCTATCAAGAGCCATAGAGATTGAGGAACAGAACAAACGACTTCT 470 480 490 500 510 520 540 550 560 570 580 590 BOVPRL GGAAGGCATGGAGATGATATTTGGCCAGGTTATTCCTGGAGCCAAAGAGACTGAGCCCTA ::::::::::::: :::: ::::::::::: :::::::: ::: :::: :::: ::: ref|XM AGAAGGCATGGAGAAGATAGTTGGCCAGGTTCATCCTGGAGTCAAGGAGAATGAGGTCTA 530 540 550 560 570 580 600 610 620 630 640 650 BOVPRL CCCTGTGTGGTCAGGACTCCCGTCCCTGCAAACTAAGGATGAAGATGCACGTTATTCTGC : : :::::::: ::::: :: :::::::: : ::::::::: : :: :: ::: ref|XM CTCCGTGTGGTCGGGACTTCCATCCCTGCAGATGGCCGATGAAGATACGCGCCTTTTTGC 590 600 610 620 630 640 660 670 680 690 700 710 BOVPRL TTTTTATAACCTGCTCCACTGCCTGCGCAGGGATTCAAGCAAGATTGACACTTACCTTAA :::::::::::::::::::::::: :::::::::::: :::::::::: ::: :: :: ref|XM TTTTTATAACCTGCTCCACTGCCTACGCAGGGATTCACATAAGATTGACAGTTATCTCAA 650 660 670 680 690 700 720 730 740 750 760 770 BOVPRL GCTCCTGAATTGCAGAATCATCTACAACAACAACTGCTAAGCCCACATTCCATCCTATCC ::::::::: ::: ::::::::::: ::: ::::::::::::::::: ::::: : :: : ref|XM GCTCCTGAAGTGCCGAATCATCTACGACAGCAACTGCTAAGCCCACA-TCCATTCCATTC 710 720 730 740 750 760 780 790 800 810 820 830 BOVPRL ATTTCTGAGATGGTTCTTAATGATCCATTCCCTGGCAAACTTCTCTGAGCTTTATAGCTT :::::::::::::::::::::::::::: :: : ::: ::::: : :: :::::::::: ref|XM ATTTCTGAGATGGTTCTTAATGATCCATCCCATAGCAGTCTTCTTTTAGTTTTATAGCTT 770 780 790 800 810 820 840 850 860 870 880 890 BOVPRL TGTAATGCATGCTTGGCTCTAATGGGTTTCATCTT---AAATAAAAACAGACTCTGTAGC : :::::::::::::: : :::::::: ::::::: :::::::::::::::: :: ref|XM TTTAATGCATGCTTGGGTGTAATGGGTCTCATCTTAAAAAATAAAAACAGACTCCACAGA 830 840 850 860 870 880 900 BOVPRL GATGTCAAAATCT ::::::::: ref|XM GATGTCAAA 890 >>ref|XM_007447054.1| PREDICTED: Lipotes ve (894 nt) initn: 2902 init1: 2544 opt: 3267 Z-score: 3414.9 bits: 643.1 E(8294009): 4e-181 banded Smith-Waterman score: 3267; 85.9% identity (85.9% similar) in 888 nt overlap (23-903:8-894) 10 20 30 40 50 BOVPRL TGCTTGGCTGAGGAGCCATAGGACGAGAGCTTC-CTGGTGAAGTGTGTTTCTTGAAATCA :: ::: :::: :::::::::::::::: : ::::::: ref|XM TAGGACTACCAGATCTTCTCTGGTGAAGTGTGTTTTTCGAAATCA 10 20 30 40 60 70 80 90 100 110 BOVPRL TCACCACCATGGACAGCAAAGGTTCGTCGCAGAA---AGGGTCCCGCCTGCTCCTGCTGC ::::::::::::::: ::::::::: :: ::::: :::::: : ::::::::::::: ref|XM TCACCACCATGGACAACAAAGGTTCATCACAGAAAGCAGGGTCACTCCTGCTCCTGCTGT 50 60 70 80 90 100 120 130 140 150 160 170 BOVPRL TGGTGGTGTCAAATCTACTCTTGTGCCAGGGTGTGGTCTCCACCCCCGTCTGTCCCAATG :: ::::::::::::: ::::::::: :: :::::: :::: ::: ::::::::: : ref|XM TGCTGGTGTCAAATCTGCTCTTGTGCAAGAGTGTGGCCTCCCTTCCCATCTGTCCCAGCG 110 120 130 140 150 160 180 190 200 210 220 230 BOVPRL GGCCTGGCAACTGCCAGGTATCCCTTCGAGACCTGTTTGACCGGGCAGTCATGGTGTCCC :: ::: :::::::::::: ::::::::::::::::::::::: :::::::: :::::: ref|XM GGGCTGTCAACTGCCAGGTGTCCCTTCGAGACCTGTTTGACCGCGCAGTCATCCTGTCCC 170 180 190 200 210 220 240 250 260 270 280 290 BOVPRL ACTACATCCATGACCTCTCCTCGGAAATGTTCAACGAATTTGATAAACGGTATGCCCAGG ::::::::::: :::::::::::::::::::::::::::::::::::::::: ::::::: ref|XM ACTACATCCATAACCTCTCCTCGGAAATGTTCAACGAATTTGATAAACGGTACGCCCAGG 230 240 250 260 270 280 300 310 320 330 340 350 BOVPRL GCAAAGGGTTCATTACCATGGCCCTCAACAGCTGCCATACCTCCTCCCTTCCTACCCCGG ::: :::::::::::::: ::: ::::::::::::: ::::::::::: : ::::: : ref|XM GCAGAGGGTTCATTACCAAGGCTATCAACAGCTGCCACACCTCCTCCCTCTCCACCCCTG 290 300 310 320 330 340 360 370 380 390 400 410 BOVPRL AAGATAAAGAACAAGCCCAACAGACCCATCATGAAGTCCTTATGAGCTTGATTCTTGGGT :::: :::::::::::::::::: :::::::::::::::: ::::: :::: ::::: ref|XM AAGACAAAGAACAAGCCCAACAGGTCCATCATGAAGTCCTTCTGAGCATGATCCTTGGCG 350 360 370 380 390 400 420 430 440 450 460 470 BOVPRL TGCTGCGCTCCTGGAATGACCCTCTGTATCACCTAGTCACCGAGGTACGGGGTATGAAAG ::::::::::::::::::::::::: :: ::::: ::::: ::::: ::::::::: ::: ref|XM TGCTGCGCTCCTGGAATGACCCTCTCTACCACCTGGTCACTGAGGTGCGGGGTATGCAAG 410 420 430 440 450 460 480 490 500 510 520 530 BOVPRL GAGCCCCAGATGCTATCCTATCGAGGGCCATAGAGATTGAGGAAGAAAACAAACGACTTC ::::::::::::::::::::: :: :::::::::::::::::: : ::::::::::::: ref|XM AAGCCCCAGATGCTATCCTATCAAGAGCCATAGAGATTGAGGAACAGAACAAACGACTTC 470 480 490 500 510 520 540 550 560 570 580 590 BOVPRL TGGAAGGCATGGAGATGATATTTGGCCAGGTTATTCCTGGAGCCAAAGAGACTGAGCCCT : ::::::::::::: :::: ::::::::::: :::::::: ::: :::: :::: :: ref|XM TAGAAGGCATGGAGAAGATAGTTGGCCAGGTTCATCCTGGAGTCAAGGAGAATGAGGTCT 530 540 550 560 570 580 600 610 620 630 640 650 BOVPRL ACCCTGTGTGGTCAGGACTCCCGTCCCTGCAAACTAAGGATGAAGATGCACGTTATTCTG :: : :::::::: ::::: :: :::::::: : ::::::::: : :: :: :: ref|XM ACTCCGTGTGGTCGGGACTTCCATCCCTGCAGATGGCCGATGAAGATACGCGCCTTTTTG 590 600 610 620 630 640 660 670 680 690 700 710 BOVPRL CTTTTTATAACCTGCTCCACTGCCTGCGCAGGGATTCAAGCAAGATTGACACTTACCTTA ::::::::::::::::::::::::: :::::::::::: :::::::::: ::: :: : ref|XM CTTTTTATAACCTGCTCCACTGCCTACGCAGGGATTCACATAAGATTGACAGTTATCTCA 650 660 670 680 690 700 720 730 740 750 760 770 BOVPRL AGCTCCTGAATTGCAGAATCATCTACAACAACAACTGCTAAGCCCACATTCCATCCTATC :::::::::: ::: ::::: ::::: ::: ::::::::::::::: : ::::: : :: ref|XM AGCTCCTGAAGTGCCGAATCGTCTACGACAGCAACTGCTAAGCCCATA-TCCATTCCATT 710 720 730 740 750 760 780 790 800 810 820 830 BOVPRL CATTTCTGAGATGGTTCTTAATGATCCATTCCCTGGCAAACTTCTCTGAGCTTTATAGCT ::::::::::: ::::::::::::::::: :: : ::: ::::: : :: ::::::::: ref|XM CATTTCTGAGACGGTTCTTAATGATCCATCCCATAGCAGTCTTCTTTTAGTTTTATAGCT 770 780 790 800 810 820 840 850 860 870 880 890 BOVPRL TTGTAATGCATGCTTGGCTCTAATGGGTTTCATCTT---AAATAAAAACAGACTCTGTAG :: :::::::::::::: : :::::::: ::::::: :::::::::::::::: :: ref|XM TTTTAATGCATGCTTGGGTATAATGGGTCTCATCTTAAAAAATAAAAACAGACTCCACAG 830 840 850 860 870 880 900 BOVPRL CGATGTCAAAATCT ::::::::: ref|XM AGATGTCAAA 890 >>ref|XM_007116324.1| PREDICTED: Physeter c (847 nt) initn: 2989 init1: 2622 opt: 3123 Z-score: 3264.6 bits: 615.2 E(8294009): 9.8e-173 banded Smith-Waterman score: 3123; 86.1% identity (86.1% similar) in 840 nt overlap (67-903:9-847) 40 50 60 70 80 90 BOVPRL GTGAAGTGTGTTTCTTGAAATCATCACCACCATGGACAGCAAAGGTTCGTCGCAGAAAGG :: ::::: ::::::::: :: :::::::: ref|XM ACACTCCACAGGGACAACAAAGGTTCATCACAGAAAGG 10 20 30 100 110 120 130 140 150 BOVPRL GTCCCGCCTGCTCCTGCTGCTGGTGGTGTCAAATCTACTCTTGTGCCAGGGTGTGGTCTC ::: : ::::::::::::: :: :: :::::::::: ::::::::: :: : :::: ::: ref|XM GTCACTCCTGCTCCTGCTGTTGCTGATGTCAAATCTGCTCTTGTGCAAGAGCGTGGCCTC 40 50 60 70 80 90 160 170 180 190 200 210 BOVPRL CACCCCCGTCTGTCCCAATGGGCCTGGCAACTGCCAGGTATCCCTTCGAGACCTGTTTGA : ::: ::::::::: ::: ::: :::::::::::: :::::::::::::::::::: ref|XM CCTTCCCATCTGTCCCAGCGGGGCTGTCAACTGCCAGGTGTCCCTTCGAGACCTGTTTGA 100 110 120 130 140 150 220 230 240 250 260 270 BOVPRL CCGGGCAGTCATGGTGTCCCACTACATCCATGACCTCTCCTCGGAAATGTTCAACGAATT ::: :::::::: ::::::::::::::::: :::::::::::::::::::::::::::: ref|XM CCGCGCAGTCATCCTGTCCCACTACATCCATAACCTCTCCTCGGAAATGTTCAACGAATT 160 170 180 190 200 210 280 290 300 310 320 330 BOVPRL TGATAAACGGTATGCCCAGGGCAAAGGGTTCATTACCATGGCCCTCAACAGCTGCCATAC :::::::::::: :::::::::: :::::::::::::: ::: ::::::::::::: :: ref|XM TGATAAACGGTACGCCCAGGGCAGAGGGTTCATTACCAAGGCTATCAACAGCTGCCACAC 220 230 240 250 260 270 340 350 360 370 380 390 BOVPRL CTCCTCCCTTCCTACCCCGGAAGATAAAGAACAAGCCCAACAGACCCATCATGAAGTCCT ::::::::: : ::::: ::::: :::::::::::::::::: ::::::::::::::: ref|XM CTCCTCCCTCTCCACCCCTGAAGACAAAGAACAAGCCCAACAGGTCCATCATGAAGTCCT 280 290 300 310 320 330 400 410 420 430 440 450 BOVPRL TATGAGCTTGATTCTTGGGTTGCTGCGCTCCTGGAATGACCCTCTGTATCACCTAGTCAC : ::::: :::: ::::: :::::::::: ::::::::::::::::: ::::: ::::: ref|XM TCTGAGCATGATCCTTGGAGTGCTGCGCTCTTGGAATGACCCTCTGTACCACCTGGTCAC 340 350 360 370 380 390 460 470 480 490 500 510 BOVPRL CGAGGTACGGGGTATGAAAGGAGCCCCAGATGCTATCCTATCGAGGGCCATAGAGATTGA ::::: ::::::::: ::: ::::::::::::::::::::: :: :::::::::::::: ref|XM GGAGGTGCGGGGTATGCAAGAAGCCCCAGATGCTATCCTATCAAGAGCCATAGAGATTGA 400 410 420 430 440 450 520 530 540 550 560 570 BOVPRL GGAAGAAAACAAACGACTTCTGGAAGGCATGGAGATGATATTTGGCCAGGTTATTCCTGG :::: : :::::::::::::: ::::::::::::: :::: ::::::::::: :::::: ref|XM GGAACAGAACAAACGACTTCTAGAAGGCATGGAGAAGATAGTTGGCCAGGTTCATCCTGG 460 470 480 490 500 510 580 590 600 610 620 630 BOVPRL AGCCAAAGAGACTGAGCCCTACCCTGTGTGGTCAGGACTCCCGTCCCTGCAAACTAAGGA :: ::: :::: :::: :::: : :::::::: ::::: :: :::::::: : :: ref|XM AGTCAAGGAGAATGAGGTCTACTCCGTGTGGTCGGGACTTCCATCCCTGCAGATGGCCGA 520 530 540 550 560 570 640 650 660 670 680 690 BOVPRL TGAAGATGCACGTTATTCTGCTTTTTATAACCTGCTCCACTGCCTGCGCAGGGATTCAAG ::::::: : :: :: ::::::::::::::::::::::::::: :::::::::::: ref|XM TGAAGATACGCGCCTTTTTGCTTTTTATAACCTGCTCCACTGCCTACGCAGGGATTCACA 580 590 600 610 620 630 700 710 720 730 740 750 BOVPRL CAAGATTGACACTTACCTTAAGCTCCTGAATTGCAGAATCATCTACAACAACAACTGCTA :::::::::: ::: :: ::::::::::: ::: ::::::::::: ::: ::::::::: ref|XM TAAGATTGACAGTTATCTCAAGCTCCTGAAGTGCCGAATCATCTACGACAGCAACTGCTA 640 650 660 670 680 690 760 770 780 790 800 810 BOVPRL AGCCCACATTCCATCCTATCCATTTCTGAGATGGTTCTTAATGATCCATTCCCTGGCAAA :::::::: ::::: : :: ::::::::::::::::::::::::::::: :: : ::: ref|XM AGCCCACA-TCCATTCCATTCATTTCTGAGATGGTTCTTAATGATCCATCCCATAGCAGT 700 710 720 730 740 750 820 830 840 850 860 870 BOVPRL CTTCTCTGAGCTTTATAGCTTTGTAATGCATGCTTGGCTCTAATGGGTTTCATCTT---A ::::: : :: ::::::::::: :::::::::::::: : :::::::: ::::::: : ref|XM CTTCTTTTAGTTTTATAGCTTTTTAATGCATGCTTGGGTGTAATGGGTCTCATCTTAAAA 760 770 780 790 800 810 880 890 900 BOVPRL AATAAAAACAGACTCTGTAGCGATGTCAAAATCT ::::::::::::::: :: ::::::::: ref|XM AATAAAAACAGACTCCACAGAGATGTCAAA 820 830 840 >>ref|NM_001008275.2| Canis lupus familiari (930 nt) initn: 2938 init1: 2576 opt: 3080 Z-score: 3218.8 bits: 606.8 E(8294009): 3.2e-170 banded Smith-Waterman score: 3080; 83.6% identity (83.6% similar) in 880 nt overlap (28-904:3-881) 10 20 30 40 50 60 BOVPRL TGCTTGGCTGAGGAGCCATAGGACGAGAGCTTCCTGGTGAAGTGTGTTTCTTGAAATCAT :: : :::: :: :::::::::: :::: ::: ref|NM CCAGATCTCTGGCGACGTGTGTTTCTCGAAAGCAT 10 20 30 70 80 90 100 110 120 BOVPRL CACCACCATGGACAGCAAAGGTTCGTCGCAGAAAGGGTCCCGCCTGCTCCTGCTGCTGGT : :::::::::: : :::::: : ::::: ::::::::: : :::::::::::::::: : ref|NM CGCCACCATGGATAACAAAGGGTGGTCGCTGAAAGGGTCACTCCTGCTCCTGCTGCTGCT 40 50 60 70 80 90 130 140 150 160 170 180 BOVPRL GGTGTCAAATCTACTCTTGTGCCAGGGTGTGGTCTCCACCCCCGTCTGTCCCAATGGGCC ::::::: : :::::: :::::::: : :::: :::: ::: ::::::::: ::: : ref|NM GGTGTCAGACCTACTCCTGTGCCAGAGCGTGGCCTCCCTGCCCATCTGTCCCAGCGGGGC 100 110 120 130 140 150 190 200 210 220 230 240 BOVPRL TGGCAACTGCCAGGTATCCCTTCGAGACCTGTTTGACCGGGCAGTCATGGTGTCCCACTA :: :::::::::::: ::::: ::::::::::::::::: :::::::: :::: ::::: ref|NM TGTCAACTGCCAGGTGTCCCTCCGAGACCTGTTTGACCGTGCAGTCATCCTGTCTCACTA 160 170 180 190 200 210 250 260 270 280 290 300 BOVPRL CATCCATGACCTCTCCTCGGAAATGTTCAACGAATTTGATAAACGGTATGCCCAGGGCAA :::::: ::::::::::::::::::::::::::::::::::: :::::::::::::: ref|NM CATCCACAACCTCTCCTCGGAAATGTTCAACGAATTTGATAAAAGGTATGCCCAGGGCCG 220 230 240 250 260 270 310 320 330 340 350 360 BOVPRL AGGGTTCATTACCATGGCCCTCAACAGCTGCCATACCTCCTCCCTTCCTACCCCGGAAGA ::::::::::::: :::: :::::::::: :: ::::::::::: ::::::: ::::: ref|NM GGGGTTCATTACCAAGGCCATCAACAGCTGTCACACCTCCTCCCTCTCTACCCCTGAAGA 280 290 300 310 320 330 370 380 390 400 410 420 BOVPRL TAAAGAACAAGCCCAACAGACCCATCATGAAGTCCTTATGAGCTTGATTCTTGGGTTGCT :: :: ::::::::::::: ::: ::::::: :::: ::: :::: :: :: :::: ref|NM CAAGGAGCAAGCCCAACAGATCCACCATGAAGACCTTCTGAATCTGATACTGAGGGTGCT 340 350 360 370 380 390 430 440 450 460 470 480 BOVPRL GCGCTCCTGGAATGACCCTCTGTATCACCTAGTCACCGAGGTACGGGGTATGAAAGGAGC :::::::::::::::::: :::::::: :::::::: :: :: ::::: ::: ::: ::: ref|NM GCGCTCCTGGAATGACCCCCTGTATCATCTAGTCACAGAAGTGCGGGGGATGCAAGAAGC 400 410 420 430 440 450 490 500 510 520 530 540 BOVPRL CCCAGATGCTATCCTATCGAGGGCCATAGAGATTGAGGAAGAAAACAAACGACTTCTGGA ::::::::: :: ::::: :: :::::::::::::: ::: :::::: : ::::::: :: ref|NM CCCAGATGCAATTCTATCCAGAGCCATAGAGATTGAAGAACAAAACAGAAGACTTCTAGA 460 470 480 490 500 510 550 560 570 580 590 600 BOVPRL AGGCATGGAGATGATATTTGGCCAGGTTATTCCTGGAGCCAAAGAGACTGAGCCCTACCC :: ::::::: :::: ::::::::::: ::::::: :: ::: : :::: :::: : ref|NM GGGTATGGAGAAGATAGTTGGCCAGGTTCATCCTGGAATCAGAGAAAATGAGGTCTACTC 520 530 540 550 560 570 610 620 630 640 650 660 BOVPRL TGTGTGGTCAGGACTCCCGTCCCTGCAAACTAAGGATGAAGATGCACGTTATTCTGCTTT ::: ::::::::::: :: :::::::: : ::::::::: : :: :: :::::: ref|NM TGTCTGGTCAGGACTTCCATCCCTGCAGATGGCGGATGAAGACACTCGCCTTTTTGCTTT 580 590 600 610 620 630 670 680 690 700 710 720 BOVPRL TTATAACCTGCTCCACTGCCTGCGCAGGGATTCAAGCAAGATTGACACTTACCTTAAGCT ::::::::::::::::::::: :::::::::::: :::::::::: ::: :: ::::: ref|NM TTATAACCTGCTCCACTGCCTACGCAGGGATTCACATAAGATTGACAATTATCTCAAGCT 640 650 660 670 680 690 730 740 750 760 770 780 BOVPRL CCTGAATTGCAGAATCATCTACAACAACAACTGCTAAGCCCACATTCCATCCTATCCATT :::::: ::: ::::: ::::: ::: ::::::::::::::::: ::::: ::::: ::: ref|NM CCTGAAGTGCCGAATCGTCTACGACAGCAACTGCTAAGCCCACA-TCCATTCTATCTATT 700 710 720 730 740 750 790 800 810 820 830 840 BOVPRL TCTGAGATGGTTCTTAATGATCCATTCCCTGGCAAACTTCTCTGAGCTTTATAGCTTTGT :::: :: ::::::::::::::: : :: : :::: ::::::: :::::::::::::: : ref|NM TCTGGGAAGGTTCTTAATGATCCGTCCCATCGCAACCTTCTCTTAGCTTTATAGCTTTTT 760 770 780 790 800 810 850 860 870 880 890 BOVPRL AATGCATGCTTGGCTCTAATGGGTTTCATCTT---AAATAAAAACAGACTCTGTAGCGAT ::::::::::::: : :::::::: ::::::: :::::::::: ::::: ::: ::: ref|NM AATGCATGCTTGGGTGTAATGGGTCTCATCTTAAAAAATAAAAACTGACTCCTTAGAGAT 820 830 840 850 860 870 900 BOVPRL GTCAAAATCT ::: ::: ref|NM GTCGAAACAGAAAAAAAAATCAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 880 890 900 910 920 930 >>ref|XM_004417690.1| PREDICTED: Odobenus r (891 nt) initn: 2864 init1: 2511 opt: 3022 Z-score: 3158.4 bits: 595.6 E(8294009): 7.7e-167 banded Smith-Waterman score: 3022; 82.8% identity (82.8% similar) in 887 nt overlap (23-905:6-891) 10 20 30 40 50 BOVPRL TGCTTGGCTGAGGAGCCATAGGACGAGAGCTTC-CTGGTGAAGTGTGTTTCTTGAAATCA :: ::: :::: :::: :: :::::::::: :::: :: ref|XM GGGCTACCAGACCTTCTCTGGCGACGTGTGTTTCTCGAAAGCA 10 20 30 40 60 70 80 90 100 110 BOVPRL TCACCACCATGGACAGCAAAGGTTCGTCGCAGAAAGGGTCCCGCCTGCTCCTGCTGCTGG ::::::::::::::: :::::: : ::::: ::::::::: : ::::: :::::::::: ref|XM TCACCACCATGGACAACAAAGGGTGGTCGCTGAAAGGGTCGCTCCTGCCCCTGCTGCTGC 50 60 70 80 90 100 120 130 140 150 160 170 BOVPRL TGGTGTCAAATCTACTCTTGTGCCAGGGTGTGGTCTCCACCCCCGTCTGTCCCAATGGGC :::::::: : :: ::: :: ::::: : :::: :::: ::: ::::::::: ::: ref|XM TGGTGTCAGAACTCCTCCTGGGCCAGAGCGTGGACTCCCTGCCCATCTGTCCCACCGGGG 110 120 130 140 150 160 180 190 200 210 220 230 BOVPRL CTGGCAACTGCCAGGTATCCCTTCGAGACCTGTTTGACCGGGCAGTCATGGTGTCCCACT ::: :::::::::::: ::::: ::::::::::::::::: :::::::: :::: :::: ref|XM CTGTCAACTGCCAGGTGTCCCTCCGAGACCTGTTTGACCGCGCAGTCATCCTGTCTCACT 170 180 190 200 210 220 240 250 260 270 280 290 BOVPRL ACATCCATGACCTCTCCTCGGAAATGTTCAACGAATTTGATAAACGGTATGCCCAGGGCA :::::::: :::::::::: :: ::::::::::::::::::::: :::: ::::::::: ref|XM ACATCCATAACCTCTCCTCCGAGATGTTCAACGAATTTGATAAAAGGTACGCCCAGGGCC 230 240 250 260 270 280 300 310 320 330 340 350 BOVPRL AAGGGTTCATTACCATGGCCCTCAACAGCTGCCATACCTCCTCCCTTCCTACCCCGGAAG :: :::::::::: :::: :::::::::: :: :: :::::::: ::::::: :::: ref|XM GGGGATTCATTACCAAGGCCATCAACAGCTGTCACACTTCCTCCCTCTCTACCCCTGAAG 290 300 310 320 330 340 360 370 380 390 400 410 BOVPRL ATAAAGAACAAGCCCAACAGACCCATCATGAAGTCCTTATGAGCTTGATTCTTGGGTTGC : :: :: :::::::: :::: ::: ::::::: :::: ::: : :::: :: : ::: ref|XM ACAAGGAGCAAGCCCAGCAGATCCACCATGAAGACCTTCTGAACCTGATACTCAGAGTGC 350 360 370 380 390 400 420 430 440 450 460 470 BOVPRL TGCGCTCCTGGAATGACCCTCTGTATCACCTAGTCACCGAGGTACGGGGTATGAAAGGAG ::::::::::::::::::: :::::::: :::::::: :: :: ::::::::: ::: :: ref|XM TGCGCTCCTGGAATGACCCCCTGTATCATCTAGTCACGGAAGTGCGGGGTATGCAAGAAG 410 420 430 440 450 460 480 490 500 510 520 530 BOVPRL CCCCAGATGCTATCCTATCGAGGGCCATAGAGATTGAGGAAGAAAACAAACGACTTCTGG :::::::: : :: :: :: :: :::::::::::::::::: :::::: : ::::::: : ref|XM CCCCAGATTCAATTCTGTCTAGAGCCATAGAGATTGAGGAACAAAACAGAAGACTTCTAG 470 480 490 500 510 520 540 550 560 570 580 590 BOVPRL AAGGCATGGAGATGATATTTGGCCAGGTTATTCCTGGAGCCAAAGAGACTGAGCCCTACC : :: ::::::: :::: ::::::::::: :::::::: :::::: : :::: :::: ref|XM AGGGTATGGAGAAGATAGTTGGCCAGGTTCATCCTGGAGTCAAAGAAAATGAGGTCTACT 530 540 550 560 570 580 600 610 620 630 640 650 BOVPRL CTGTGTGGTCAGGACTCCCGTCCCTGCAAACTAAGGATGAAGATGCACGTTATTCTGCTT : :: ::::::::::: ::::::::::: : :::::::: : :: :: ::::: ref|XM CCGTATGGTCAGGACTTCCGTCCCTGCAGATGGCTGATGAAGACACTCGCCTTTTTGCTT 590 600 610 620 630 640 660 670 680 690 700 710 BOVPRL TTTATAACCTGCTCCACTGCCTGCGCAGGGATTCAAGCAAGATTGACACTTACCTTAAGC :::::::::::::::::::::: :::::::::::: :::::::::: ::: :: :::: ref|XM TTTATAACCTGCTCCACTGCCTACGCAGGGATTCACATAAGATTGACAATTATCTCAAGC 650 660 670 680 690 700 720 730 740 750 760 770 BOVPRL TCCTGAATTGCAGAATCATCTACAACAACAACTGCTAAGCCCACATTCCATCCTATCCAT ::::::: ::: ::::: ::::: ::: :::::::::::::: :: ::: : : ::: :: ref|XM TCCTGAAGTGCCGAATCGTCTACGACAGCAACTGCTAAGCCCGCA-TCCGTGCCATCTAT 710 720 730 740 750 760 780 790 800 810 820 830 BOVPRL TTCTGAGATGGTTCTTAATGATCCATTCCCTGGCAAACTTCTCTGAGCTTTATAGCTTTG ::::: :: ::::::::::::::: : :: : :::: :: :::: :::::::::::::: ref|XM TTCTGGGAAGGTTCTTAATGATCCGTCCCATAGCAAGCTCCTCTTAGCTTTATAGCTTTT 770 780 790 800 810 820 840 850 860 870 880 890 BOVPRL TAATGCATGCTTGGCTCTAATGGGTTTCATCTT---AAATAAAAACAGACTCTGTAGCGA :::::::::::::: : :::::::: ::::::: :::::::::: ::::: : : :: ref|XM TAATGCATGCTTGGGTGTAATGGGTCTCATCTTAAAAAATAAAAACTGACTCCTTGGAGA 830 840 850 860 870 880 900 BOVPRL TGTCAAAATCT ::::::::: ref|XM TGTCAAAAT 890 >>ref|XM_005665624.1| PREDICTED: Sus scrofa (932 nt) initn: 2416 init1: 2416 opt: 3019 Z-score: 3154.9 bits: 595.0 E(8294009): 1.2e-166 banded Smith-Waterman score: 3019; 83.1% identity (83.1% similar) in 875 nt overlap (33-904:44-917) 10 20 30 40 50 60 BOVPRL CTTGGCTGAGGAGCCATAGGACGAGAGCTTCCTGGTGAAGTGTGTTTCTTGAAATCATCA ::::: ::::::::::::: :::::::::: ref|XM AAGAGAAAGCTGTGGGACTACCAGATCACCCCTGGCGAAGTGTGTTTCTCGAAATCATCA 20 30 40 50 60 70 70 80 90 100 110 BOVPRL CCACCATGGACAGCAAAGGTTCGTCGCAGAA---AGGGTCCCGCCTGCTCCTGCTGCTGG :: ::::::::: :: ::: ::::: ::::: :::::: : ::::::::: :::::: ref|XM CCGCCATGGACAACAGAGGGTCGTCACAGAAAGCAGGGTCACTCCTGCTCCTACTGCTGC 80 90 100 110 120 130 120 130 140 150 160 170 BOVPRL TGGTGTCAAATCTACTCTTGTGCCAGGGTGTGGTCTCCACCCCCGTCTGTCCCAATGGGC ::::::::::::: :::::::: :: : :::: :::: ::: :::: :::: ::: ref|XM TGGTGTCAAATCTGTTCTTGTGCAAGAGCGTGGCCTCCCTGCCCATCTGCCCCAGCGGGG 140 150 160 170 180 190 180 190 200 210 220 230 BOVPRL CTGGCAACTGCCAGGTATCCCTTCGAGACCTGTTTGACCGGGCAGTCATGGTGTCCCACT ::: :::::::::::: ::::::::::::::::: ::::: :::::::: ::::::::: ref|XM CTGTCAACTGCCAGGTGTCCCTTCGAGACCTGTTCGACCGTGCAGTCATCCTGTCCCACT 200 210 220 230 240 250 240 250 260 270 280 290 BOVPRL ACATCCATGACCTCTCCTCGGAAATGTTCAACGAATTTGATAAACGGTATGCCCAGGGCA :::::::: ::::::: ::::::::::::::::::::::::::: ::::::::::::::: ref|XM ACATCCATAACCTCTCTTCGGAAATGTTCAACGAATTTGATAAAAGGTATGCCCAGGGCA 260 270 280 290 300 310 300 310 320 330 340 350 BOVPRL AAGGGTTCATTACCATGGCCCTCAACAGCTGCCATACCTCCTCCCTTCCTACCCCGGAAG :::::::::::::: :::: ::::::::::::: ::::::::::: :::: :: :::: ref|XM GAGGGTTCATTACCAAGGCCATCAACAGCTGCCACACCTCCTCCCTCTCTACGCCTGAAG 320 330 340 350 360 370 360 370 380 390 400 410 BOVPRL ATAAAGAACAAGCCCAACAGACCCATCATGAAGTCCTTATGAGCTTGATTCTTGGGTTGC : ::::: ::::::::::::: :::::::::: :::: ::: :::::: :: : ::: ref|XM ACAAAGAGCAAGCCCAACAGATCCATCATGAAATCCTCCTGAACTTGATACTGAGAGTGC 380 390 400 410 420 430 420 430 440 450 460 470 BOVPRL TGCGCTCCTGGAATGACCCTCTGTATCACCTAGTCACCGAGGTACGGGGTATGAAAGGAG ::::::::::::::::::: ::::::::::: ::::: :: :: :::::::: : : :: ref|XM TGCGCTCCTGGAATGACCCGCTGTATCACCTGGTCACGGAAGTGAGGGGTATGCAGGAAG 440 450 460 470 480 490 480 490 500 510 520 530 BOVPRL CCCCAGATGCTATCCTATCGAGGGCCATAGAGATTGAGGAAGAAAACAAACGACTTCTGG :::::::::::::::: ::::: ::::::::::: :::::: :::::::::: ::::: : ref|XM CCCCAGATGCTATCCTCTCGAGAGCCATAGAGATCGAGGAACAAAACAAACGGCTTCTAG 500 510 520 530 540 550 540 550 560 570 580 590 BOVPRL AAGGCATGGAGATGATATTTGGCCAGGTTATTCCTGGAGCCAAAGAGACTGAGCCCTACC :::::::::::: :::: : :::::::: ::::::: ::: :::: :::: :::: ref|XM AAGGCATGGAGAAGATAGTCGGCCAGGTCCATCCTGGAATCAAGGAGAATGAGGTCTACT 560 570 580 590 600 610 600 610 620 630 640 650 BOVPRL CTGTGTGGTCAGGACTCCCGTCCCTGCAAACTAAGGATGAAGATGCACGTTATTCTGCTT :::::::::: ::::: :: :::::::: : :::::::: : :: :: ::::: ref|XM CTGTGTGGTCCGGACTTCCCTCCCTGCAGATGGCTGATGAAGACACTCGCCTTTTTGCTT 620 630 640 650 660 670 660 670 680 690 700 710 BOVPRL TTTATAACCTGCTCCACTGCCTGCGCAGGGATTCAAGCAAGATTGACACTTACCTTAAGC :::::::::::::::::::::: :::::::::::: :::::::::: ::: :: :::: ref|XM TTTATAACCTGCTCCACTGCCTACGCAGGGATTCACATAAGATTGACAATTATCTCAAGC 680 690 700 710 720 730 720 730 740 750 760 770 BOVPRL TCCTGAATTGCAGAATCATCTACAACAACAACTGCTAAGCCCACATTCCATCCTATCCAT : :: :: ::: ::::::::::: ::: :::::::::::::::: ::::::: :: : ref|XM TTCTCAAGTGCCGAATCATCTACGACAGCAACTGCTAAGCCCAC-GTCCATCCCGTCTGT 740 750 760 770 780 790 780 790 800 810 820 830 BOVPRL TTCTGAGATGGTTCTTAATGATCCATTCCCTGGCAAACTTCTCTGAGCTTTATAGCTTTG :::: : :: ::::::: : ::::: :: : : :: :::: : :: ::::::::::: ref|XM TTCTTAACTGTTTCTTAACGCTCCATCCCATAGAAAGATTCTTTTAGTTTTATAGCTTTT 800 810 820 830 840 850 840 850 860 870 880 890 BOVPRL TAATGCATGCTTGGCTCTAATGGGTTTCATCTTAAATAAAAACAGACTCTGTAGCGATGT :::::::::::::: : ::: : : :: ::::::: ::: : :::::: :::: ::::: ref|XM TAATGCATGCTTGGGTGTAACGCATCTCCTCTTAAAAAAATAAAGACTCCGTAGAGATGT 860 870 880 890 900 910 900 BOVPRL CAAAATCT ::::: ref|XM CAAAAATCTTAAAAAGCAAA 920 930 >>ref|XM_006740202.1| PREDICTED: Leptonycho (881 nt) initn: 2818 init1: 2456 opt: 2965 Z-score: 3098.9 bits: 584.6 E(8294009): 1.6e-163 banded Smith-Waterman score: 2965; 82.3% identity (82.3% similar) in 881 nt overlap (30-906:1-880) 10 20 30 40 50 BOVPRL TGCTTGGCTGAGGAGCCATAGGACGAGAGCTTC-CTGGTGAAGTGTGTTTCTTGAAATCA :::: :::: :: :::::::::: :::: :: ref|XM CTTCTCTGGCGACGTGTGTTTCTCGAAAGCA 10 20 30 60 70 80 90 100 110 BOVPRL TCACCACCATGGACAGCAAAGGTTCGTCGCAGAAAGGGTCCCGCCTGCTCCTGCTGCTGG ::::::::::::::: :::::: : ::: : ::::::::: : ::::: :::::::::: ref|XM TCACCACCATGGACAACAAAGGGTGGTCACTGAAAGGGTCGCTCCTGCCCCTGCTGCTGC 40 50 60 70 80 90 120 130 140 150 160 170 BOVPRL TGGTGTCAAATCTACTCTTGTGCCAGGGTGTGGTCTCCACCCCCGTCTGTCCCAATGGGC ::::::: : :: ::: :: ::::: : :: : :::: ::: ::::::::: ::: ref|XM TGGTGTCGGAACTCCTCCTGGGCCAGAGCGTAGCCTCCCTGCCCATCTGTCCCACCGGGG 100 110 120 130 140 150 180 190 200 210 220 230 BOVPRL CTGGCAACTGCCAGGTATCCCTTCGAGACCTGTTTGACCGGGCAGTCATGGTGTCCCACT ::: :::::::::::: ::::: ::::::::::::::::: :: ::::: :::: :::: ref|XM CTGTCAACTGCCAGGTGTCCCTCCGAGACCTGTTTGACCGCGCGGTCATCCTGTCTCACT 160 170 180 190 200 210 240 250 260 270 280 290 BOVPRL ACATCCATGACCTCTCCTCGGAAATGTTCAACGAATTTGATAAACGGTATGCCCAGGGCA :::::::: ::::::::::::: ::::::::::::::::::::: :::: ::::::::: ref|XM ACATCCATAACCTCTCCTCGGAGATGTTCAACGAATTTGATAAAAGGTACGCCCAGGGCC 220 230 240 250 260 270 300 310 320 330 340 350 BOVPRL AAGGGTTCATTACCATGGCCCTCAACAGCTGCCATACCTCCTCCCTTCCTACCCCGGAAG :: :::::::::: :::: :::::::::: :: :: :::::::: ::::::: :::: ref|XM GGGGTTTCATTACCAAGGCCATCAACAGCTGTCACACTTCCTCCCTCTCTACCCCTGAAG 280 290 300 310 320 330 360 370 380 390 400 410 BOVPRL ATAAAGAACAAGCCCAACAGACCCATCATGAAGTCCTTATGAGCTTGATTCTTGGGTTGC : :: :: :::::::: :: : ::: :: :::: :::: ::: : :::: :: : ::: ref|XM ACAAGGAGCAAGCCCAGCAAATCCACCACGAAGACCTTCTGAACCTGATACTCAGAGTGC 340 350 360 370 380 390 420 430 440 450 460 470 BOVPRL TGCGCTCCTGGAATGACCCTCTGTATCACCTAGTCACCGAGGTACGGGGTATGAAAGGAG ::::::::::::::::::: :::::::: :::::::: :: :: ::::::::: ::: :: ref|XM TGCGCTCCTGGAATGACCCCCTGTATCATCTAGTCACGGAAGTGCGGGGTATGCAAGAAG 400 410 420 430 440 450 480 490 500 510 520 530 BOVPRL CCCCAGATGCTATCCTATCGAGGGCCATAGAGATTGAGGAAGAAAACAAACGACTTCTGG :::::::: : :: :: :: :: :::::::::::::::::: :::::: : ::::::: : ref|XM CCCCAGATTCGATTCTGTCCAGAGCCATAGAGATTGAGGAACAAAACAGAAGACTTCTAG 460 470 480 490 500 510 540 550 560 570 580 590 BOVPRL AAGGCATGGAGATGATATTTGGCCAGGTTATTCCTGGAGCCAAAGAGACTGAGCCCTACC : :: ::::::: :::: ::::::::::: :::::::: :::::::: :::: :::: ref|XM AGGGTATGGAGAAGATAGTTGGCCAGGTTCATCCTGGAGTCAAAGAGAATGAGGTCTACT 520 530 540 550 560 570 600 610 620 630 640 650 BOVPRL CTGTGTGGTCAGGACTCCCGTCCCTGCAAACTAAGGATGAAGATGCACGTTATTCTGCTT : :: ::::::::::: ::::::::::: : :::::::: : :: :: ::::: ref|XM CCGTATGGTCAGGACTTCCGTCCCTGCAGATGGCTGATGAAGACACTCGCCTTTTTGCTT 580 590 600 610 620 630 660 670 680 690 700 710 BOVPRL TTTATAACCTGCTCCACTGCCTGCGCAGGGATTCAAGCAAGATTGACACTTACCTTAAGC :::::::::::::::::::::: ::::: :::::: :::::::::: ::: :: :::: ref|XM TTTATAACCTGCTCCACTGCCTACGCAGAGATTCACATAAGATTGACAATTATCTCAAGC 640 650 660 670 680 690 720 730 740 750 760 770 BOVPRL TCCTGAATTGCAGAATCATCTACAACAACAACTGCTAAGCCCACATTCCATCCTATCCAT ::::::: ::: ::::: ::::: ::: :::::::::::: :::: ::: : : ::: :: ref|XM TCCTGAAGTGCCGAATCGTCTACGACAGCAACTGCTAAGCGCACA-TCCGTGCCATCTAT 700 710 720 730 740 750 780 790 800 810 820 830 BOVPRL TTCTGAGATGGTTCTTAATGATCCATTCCCTGGCAAACTTCTCTGAGCTTTATAGCTTTG ::::: :: ::::::::::::::::: :: : :::: :: :::: :::::::::::::: ref|XM TTCTGGGAAGGTTCTTAATGATCCATCCCATAGCAAGCTCCTCTTAGCTTTATAGCTTTT 760 770 780 790 800 810 840 850 860 870 880 890 BOVPRL TAATGCATGCTTGGCTCTAATGGGTTTCATCTT---AAATAAAAACAGACTCTGTAGCGA :::::::::::::: : :::::::: ::::::: :::::::::: ::::: : :: ref|XM TAATGCATGCTTGGGTGTAATGGGTCTCATCTTAAAAAATAAAAACTGACTCCTCGGAGA 820 830 840 850 860 870 900 BOVPRL TGTCAAAATCT :::::::::: ref|XM TGTCAAAATCA 880 907 residues in 1 query sequences 16908773747 residues in 8294009 library sequences Tcomplib [36.3.6 Aug., 2014(preload9)] (64 proc in memory [7G]) start: Tue Sep 30 15:21:50 2014 done: Tue Sep 30 15:22:47 2014 Total Scan time: 1028.730 Total Display time: 1.010 Function used was FASTA [36.3.6 Aug., 2014(preload9)]