BLASTP 2.0.10 [Aug-26-1999] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|730725|sp|Q05362|SCHB_STRHA SCHB PROTEIN (138 letters) Database: data/swissprot 82,258 sequences; 29,652,561 total letters Searching..................................................done QUERY 1 MTEQQARIVAFDDVPPNRRRGGD----VRALLTPTTAGATSGFMGVAV------VR---- 46 504 1 MTEQQARIVAFDDVPPNRRRGGD----VRALLTPTTAGATSGFMGVAV------VR---- 46 10461 1 MTDQQVRIVSLGDIAPNRRRGGD----LRALLTPTTAGSTSGFMGVAI------VQ---- 46 6345 1 MDKMRPRVVDVKEIEPNRKRGGD----LRTLLTPVTVGATSGFMGLAI------MR---- 46 1128 11 TVAAAAKIAMSSVAPSHRQGGS----TRALLTPSSVGATSGFLGHIE------LA---- 55 72438 417 ------VR---- 418 588 385 ------VK---- 386 5811 383 ------VK---- 384 7036 380 ------VK---- 381 30070 833 GKLV------LG---- 838 22447 93 LGVSM------NRVDFA 103 10500 385 ------VK---- 386 49644 385 ------VK---- 386 20808 93 LGVSM------NRVDFA 103 22446 93 LGVSM------NRVDFA 103 48079 48 AKVTAADFVYSGLAKPGNTTNIINAAVTPAFVGQFPGVIGLGVTLARLDLA---- 98 64209 31 ------VK---- 32 8178 0 ---- 33663 452 AAEDQKRYERELSD----MRATPTPTTAGKKVKFLG----------E---- 484 QUERY 47 PGERISEHYHPYSEEFVYVTAGAFEV----DLDD----VPHPLRT---------GQG--- 86 504 47 PGERISEHYHPYSEEFVYVTAGAFEV----DLDD----VPHPLRT---------GQG--- 86 10461 47 PGDRIAEHYHPYSEEFVYVTEGALEV----DLDG----VPHSLGT---------GQG--- 86 6345 47 PGERISEHYHPYSEEFVYVVEGRLEV----DLDG----ETFPLRA---------DQG--- 86 1128 56 PGESVTEHYHPFSDKYLYLIEGSLVV----RVNG----EEVRLER---------DEA--- 95 72438 419 PGKMLSLHKHFHRSEHWICVKGTAEV----TIED----RVTILHE---------NQS--- 458 588 387 PGEGISEQQHYHRAEHWIIVAGTAKI----TIKG----EVKILTE---------NES--- 426 5811 385 PGARLSLQMHHHRAEHWIVVSGTAQV----TCDD----KTFLLTE---------NQS--- 424 7036 382 PGATLSLQMHHHRAEHWIVVSGTAEV----TRGD----EVLLLTE---------NQS--- 421 7422 228 GDRIVDHYHEYHTETFYCLEGQMTM----WTDG----QEIQLNP---------GDF--- 266 8765 46 HKHDIHDQIAYVAAGSFEV----VIEG----EKRILKT---------GDA--- 78 30070 839 PYEEKGKQHVGQDILVFYVNFGDLLC----TLHE----TPYKLTT---------GDS--- 878 22447 104 PGGTNPPHIHPRATEIGIVMKGELLVGILGSLDSGNKLYSRVVRA---------GET--- 151 10500 387 PGEKFVAQMHHHRAEHWIVLSGTARV----TKGE----QTYMVSE---------NES--- 426 49644 387 PGGAFSMQMHHHRAEHWVILAGTGQV----TVNG----KQFLLTE---------NQS--- 426 59757 20 HHHEYPQ-IILGLMGKSEL----SIED----SSVCLSP---------GMG--- 51 20808 104 PGGTNPPHVHPRATEIGIVMKGELLVGILGSLDSGNKLYSRVVRA---------GET--- 151 22446 104 PGGTNPPHIHPRATEIGIVMKGELLVGILGSLDSGNKLYSRVVRA---------GET--- 151 48079 99 PGGVIPMHTHPGASEILNVVEG 120 64209 33 EGLRANWFYNPVLEEFA---------------------IPDSYQE---------GHG--- 59 8178 325 PGVIKAFHYHEKQDDLWFFPTGHAQV----VLYD----LREDSKTKGETDVYYMGEDNPM 376 33663 485 PKKAPMNGYQKFSQELL 501 QUERY 87 -LLIPKDVRHRFRNTGDVEARLV---FHLG---PLAPRPDLGHVDTEETDETAPAGVVS 138 504 87 -LLIPKDVRHRFRNTGDVEARLV---FHLG---PLAPRPDLGHVDTEETDETAPAGVVS 138 10461 87 -LLIPQDMRHRFRNAGDVEARLV---FHLG---PLAPRPELGHVDTEDAEGNA 132 6345 87 -LMIPIDMRHRFRNVGDEEARMV---FHLS---PLAPKPSLGHVDTE 126 1128 96 -LFVTRGQRHRIENRGNVPARVV---FQIS---PLAPRPELGHVDTEPVPNPAAA 143 72438 459 -IYIPEGAIHRLGNPGKIMLELVE--IQTG---AYLGEDDIIRVADESRNE 503 588 427 -VYIPVGVKHCLENPGKIALELI 448 5811 425 -TYIPIASVHRLANPGKIPLEII 446 7036 422 -TYIPLGVTHRLKNPGKLPLELI 443 7422 267 -LHVPANTVHSYR 278 8765 79 -YMAVKNEMH 87 30070 879 -FYVPSGNHYNIKNLLNVESSLL---F 901 22447 152 -FLIPRGLMHFQFNVGKTEASMV---VFFN---SQSP 181 10500 427 -TFIPPNTIHALENPGMTPLKLI 448 49644 427 -TFIPIGAEHSLENPGRI 443 59757 52 -YRINANVEHSFSGTSNNQV-LV---MNLP---PFISMTDV 84 20808 152 -FLIPRGLMHFQFNVGKTEASMV 173 22446 152 -FLIPRGLMHFQFNVGKTEASMV 173 39294 142 IRCRFRNSTRMEFRLQIWRYSMGPSPPIAPAPDLEEV---LTNITAPPG 187 39295 142 IRCRFRNSTRMEFRLQIWRYSMGPSPPIAPAPDLEEV---LTNITAPPG 187 64209 60 -VNVKITFSHRSRNTGQI 76 8178 377 LLLIPKGVAHGYRVLGETPLTII---Y 400 Database: data/swissprot Posted date: Nov 29, 1999 4:39 PM Number of letters in database: 29,652,561 Number of sequences in database: 82,258 Lambda K H 0.319 0.139 0.415 Gapped Lambda K H 0.270 0.0470 0.230 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 8952568 Number of Sequences: 82258 Number of extensions: 387403 Number of successful extensions: 727 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 13 Number of HSP's successfully gapped in prelim test: 10 Number of HSP's that attempted gapping in prelim test: 712 Number of HSP's gapped (non-prelim): 23 length of query: 138 length of database: 29,652,561 effective HSP length: 47 effective length of query: 91 effective length of database: 25,786,435 effective search space: 2346565585 effective search space used: 2346565585 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.8 bits) X3: 64 (24.9 bits) S1: 41 (21.7 bits) S2: 61 (28.2 bits)