symbols2indices {limma} | R Documentation |
Make a list of gene sets symbols into a list of gene sets indices used to create input for romer function.
symbols2indices(gmtl.official, symbol)
gmtl.official |
list of gene sets containing official gene symbols. The gene sets can be the ones from the molecular signatures database in Broad Institute. |
symbol |
vector of symbols for the probesets. |
This function takes a list of official gene sets symbols and returns a list of indices of them according to the vector symbol.
list of indices.
Gordon Smyth and Yifang Hu