SPADES: SAINT-PETERSBURG GENOME ASSEMBLER Copyright (c) 2011-2014 Saint-Petersburg Academic University SPAdes is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License, Version 2, dated June 1991, as published by the Free Software Foundation. SPAdes is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details. You should have received a copy of the GNU General Public License along with this program; if not, write to the Free Software Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. ------------------------------------------------------------------------------- Current SPAdes contributors: Dmitry Antipov, Anton Bankevich. Alexey Gurevich, Anton Korobeynikov, Sergey Nurk, Andrey Prjibelski, Yana Safonova, Artem Tarasov, Irina Vasilinetc, Alla Lapidus, Glenn Tesler, Max Alekseyev and Pavel Pevzner Also contributed: Mikhail Dvorkin, Alexander Kulikov, Valery Lesin, Sergey Nikolenko, Son Pham, Alexey Pyshkin, Vladislav Saveliev, Alexander Sirotkin, Yakov Sirotkin, Nikolay Vyahhi Contacts: http://bioinf.spbau.ru/spades spades.support@bioinf.spbau.ru References: Anton Bankevich, Sergey Nurk, Dmitry Antipov, Alexey A. Gurevich, Mikhail Dvorkin, Alexander S. Kulikov, Valery M. Lesin, Sergey I. Nikolenko, Son Pham, Andrey D. Prjibelski, Alexey V. Pyshkin, Alexander V. Sirotkin, Nikolay Vyahhi, Glenn Tesler, Max A. Alekseyev, and Pavel A. Pevzner. SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing. Journal of Computational Biology 19(5) (2012), 455-477. doi:10.1089/cmb.2012.0021 Sergey Nurk, Anton Bankevich, Dmitry Antipov, Alexey Gurevich, Anton Korobeynikov, Alla Lapidus, Andrey Prjibelsky, Alexey Pyshkin, Alexander Sirotkin, Yakov Sirotkin, Ramunas Stepanauskas, Jeffrey McLean, Roger Lasken, Scott Clingenpeel, Tanja Woyke, Glenn Tesler, Max Alekseyev, and Pavel Pevzner. Assembling Genomes and Mini-metagenomes from Highly Chimeric Reads. Lecture Notes in Computer Science 7821 (2013), pp. 158-170. doi:10.1007/978-3-642-37195-0_13