#!/bin/env tcsh -f # $Id: INSTALL.xclient,v 1.2 1998/04/17 18:20:28 mieg Exp $ echo ACEDB, graphic client installation echo Jean Thierry-Mieg, nov 1997 echo ' ' echo The graphic acedb client is part of the acedb system echo It will import the data transparently echo from the server, build progressivelly a database on echo your local disk, and refresh the data when needed. echo ' ' echo If you do not have it, you should first echo import the the acedb executable for your platform echo from say ftp://ncbi.nlm.nih.gov/pub/acedb echo and run the INSTALL script echo ' ' echo -n " Should we proceed? Please answer yes/no [yes]: " switch("$<") case "": case "yes": case "y": breaksw default: echo ' You did not answer yes, I quit' exit breaksw endsw setenv ici `pwd` echo ' ' chose_xclient_dir: echo Where do you want to install your client database echo I suggest the directory `pwd`/XCLIENT echo ' ' echo -n " Please answer ok, or give a directory name [ok]: " setenv toto $< setenv toto1 `echo $toto | nawk '{gsub (/ /,"",$1) ; print;}'` switch ("$toto1") case "": case "ok": case "o": setenv xclient_dir `pwd`/XCLIENT breaksw default: setenv xclient_dir $toto1 breaksw endsw if (-d $xclient_dir) then echo $xclient_dir already exist and contains ls $xclient_dir else echo $xclient_dir does not yet exists endif echo "Do you confirm $xclient_dir ?" echo ' ' echo -n " Please answer yes/no [yes]: " switch("$<") case "": case "yes": case "y": breaksw default: goto chose_xclient_dir breaksw endsw if !(-d $xclient_dir) mkdir $xclient_dir if !(-d $xclient_dir) then echo Sorry, i cannot create $xclient_dir exit 1 endif cd $xclient_dir setenv xclient_dir `pwd` #absolute path unsetenv xcl_exe echo ' ' echo "Where is your ACEDB installation directory: " echo ' ' chose_acedb_dir: cd $ici echo -n " Please give a directory name or quit [.]: " setenv toto $< if ($toto == "") then setenv toto `pwd` endif if ($toto == "quit") then exit 1 endif if !(-d $toto) then echo $toto does not exist goto chose_acedb_dir endif cd $toto setenv acedb_dir `pwd` cd $acedb_dir if !(-x $xclient_dir/xcl) then if (-e $acedb_dir/xcl) then cp $acedb_dir/xcl $xclient_dir else if (-e $acedb_dir/wtools/xcl) then cp $acedb_dir/wtools/xcl $xclient_dir else if !(-e $acedb_dir/bin/xcl) then echo I cannot locate the script $acedb_dir/bin/xcl echo "can you suggest another location ?" goto chose_acedb_dir else cp $acedb_dir/bin/xcl $xclient_dir endif endif chmod 755 $xclient_dir/xcl endif endif cd $acedb_dir if !(-l $xclient_dir/tace) then if (-e $acedb_dir/tace) then ln -s $acedb_dir/tace $xclient_dir/tace else if !(-e $acedb_dir/bin/tace) then echo I cannot locate the executable tace in `pwd` or `pwd`/bin echo "can you suggest another location ?" goto chose_acedb_dir else ln -s $acedb_dir/bin/tace $xclient_dir/tace endif endif endif if !(-l $xclient_dir/aceclient) then if (-e $acedb_dir/aceclient) then ln -s $acedb_dir/aceclient $xclient_dir/aceclient else if !(-e $acedb_dir/bin/aceclient) then echo I cannot locate the executable aceclient in `pwd` or `pwd`/bin echo "can you suggest another location ?" goto chose_acedb_dir else ln -s $acedb_dir/bin/aceclient $xclient_dir/aceclient endif endif endif if ( ! -l $xclient_dir/xaceclient) then if (-e $acedb_dir/xaceclient) then ln -s $acedb_dir/xaceclient $xclient_dir/xaceclient echo hi1 else if ( ! -e $acedb_dir/bin/xaceclient) then echo I cannot locate the executable xaceclient in `pwd` or `pwd`/bin echo "can you suggest another location ?" goto chose_acedb_dir else ln -s $acedb_dir/bin/xaceclient $xclient_dir/xaceclient endif endif endif if !(-l $xclient_dir/xace) then if (-e $acedb_dir/xace) then ln -s $acedb_dir/xace $xclient_dir/xace else if !(-e $acedb_dir/bin/xace) then echo I cannot locate the executable xace in `pwd` or `pwd`/bin echo "can you suggest another location ?" goto chose_acedb_dir else ln -s $acedb_dir/bin/xace $xclient_dir/xace endif endif endif if !(-l $xclient_dir/acediff) then if (-e $acedb_dir/acediff) then ln -s $acedb_dir/acediff $xclient_dir/acediff else if !(-e $acedb_dir/bin/acediff) then echo I cannot locate the executable acediff in `pwd` or `pwd`/bin echo "can you suggest another location ?" goto chose_acedb_dir else ln -s $acedb_dir/bin/acediff $xclient_dir/acediff endif endif endif echo ' ' echo 'Please specify the data server you will use' echo I suggest the C.elegans data server in Montpellier beta.crbm.cnrs-mop.fr echo ' ' chose_server: echo -n " Please answer ok, or give a server name or ip number [ok]: " setenv toto $< setenv toto1 `echo $toto | nawk '{gsub (/ /,"",$1) ; print;}'` switch ("$toto1") case "": case "ok": setenv server_name beta.crbm.cnrs-mop.fr goto server_ok breaksw default: setenv server_name $toto1 breaksw endsw echo "Do you confirm $server_name ?" echo ' ' echo -n " Please answer yes/no [yes]: " switch("$<") case "": case "yes": case "y": breaksw default: goto chose_server breaksw endsw server_ok: echo ' ' echo 'Please specify the port server you will use' echo I suggest the C.elegans port server in Montpellier 20000100 echo ' ' chose_port: echo -n " Please answer ok, or give a port number [ok]: " setenv toto $< setenv toto1 `echo $toto | nawk '{gsub (/ /,"",$1) ; print;}'` switch ("$toto1") case "": case "ok": setenv port_name 20000100 goto port_ok breaksw default: setenv port_name $toto1 breaksw endsw echo "Do you confirm $server_name $port_name?" echo ' ' echo -n " Please answer yes/no [yes]: " switch("$<") case "": case "yes": case "y": breaksw default: goto chose_port breaksw endsw port_ok: cd $xclient_dir echo '#\!/bin/csh -f' >! go echo "cd $xclient_dir" >> go echo 'set path = (. $path)' >> go echo "./xcl $server_name $port_name" >> go chmod 755 go echo Testing the connection to the aceserver: $server_name $port_name ./aceclient $server_name -port $port_name << END >! ___getserver___ || goto noconnect status END setenv SERVER_DIR `grep directory ___getserver___ | awk '{dd=$4; i = length(dd); print substr(dd,1,i-2);}'` \rm -rf ___getserver___ echo Successful connection to aceserver $server_name $port_name echo "installation is complete, to run the client type the command $xclient_dir/go" exit 0 noconnect: \rm -rf ___getserver___ echo Sorry, i cannot connect to the server, retry later or try a differnet address echo "To run the client type the command $xclient_dir/go"