/* File: b_.h * Author: Fred Wobus (fw@sanger.ac.uk) * Copyright (c) J Thierry-Mieg and R Durbin, 1999 * ------------------------------------------------------------------- * Acedb is free software; you can redistribute it and/or * modify it under the terms of the GNU General Public License * as published by the Free Software Foundation; either version 2 * of the License, or (at your option) any later version. * * This program is distributed in the hope that it will be useful, * but WITHOUT ANY WARRANTY; without even the implied warranty of * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the * GNU General Public License for more details. * * You should have received a copy of the GNU General Public License * along with this program; if not, write to the Free Software * Foundation, Inc., 59 Temple Place - Suite 330, Boston, MA 02111-1307, USA. * or see the on-line version at http://www.gnu.org/copyleft/gpl.txt * ------------------------------------------------------------------- * This file is part of the ACEDB genome database package, written by * Richard Durbin (Sanger Centre, UK) rd@sanger.ac.uk, and * Jean Thierry-Mieg (CRBM du CNRS, France) mieg@kaa.crbm.cnrs-mop.fr * * Description: definition of the B block private to bsubs and b2bs.c * Exported functions: * HISTORY: * Last edited: Aug 26 16:53 1999 (fw) * Created: Thu Aug 26 16:52:43 1999 (fw) * CVS info: $Id: b_.h,v 1.5 1999/09/14 16:15:26 srk Exp $ *------------------------------------------------------------------- */ #ifndef ACEDB_B__H #define ACEDB_B__H #define DEF_BP /* avoid typedefing it as void* in disk.h */ typedef struct bblock *BBLOCK ; typedef BBLOCK BP ; #include "disk_.h" /* defines BLOCKHEADER */ typedef short NODE; typedef struct bhat *BHAT; struct bhat { BLOCKHEADER h ; NODE top, free; } ; /* h.type should be 'B' = Bblock */ /* h.key is the key of the first object in the block */ #include "bs_.h" /* defines the BSdata Union */ #define NODEX sizeof(BSdata) /* >= sizeof(KEY) I hope */ union char_key { KEY key ; BSdata x ; char c[NODEX] ; } ; typedef struct bnode { NODE d1, d2; union char_key ck; } *NODEP ; #define BNODEMAX ((BLOC_SIZE-sizeof(struct bhat))/sizeof(struct bnode)) struct bblock { struct bhat hat; struct bnode n[BNODEMAX]; } ; /***************************************************************************/ void Binit (BP p); void Bget (BP *bp,NODE *nn,KEY key); void Bdump (KEY key); void Bnode2str (char *cq, BP bp, NODEP *r); void Bstr2node (BS bs, BP bp, NODEP *r); void Bprune (BP bp, NODE nn,BOOL bothsides); int Bbranchlen (BP bp, NODE nn); int Bfreelen (BP bp); NODEP Bnewnode (BP bp); BOOL Bnextkey (void **it,BP p,KEY *key); void Balias (BP p,KEY key, KEY newKey); #endif /* !ACEDB_B__H */