Name | Last modified | Size | Description | |
---|---|---|---|---|
Parent Directory | - | |||
Alignment.cc | 2023-10-09 17:54 | 15K | ||
Alignment.hh | 2023-10-09 17:54 | 6.9K | ||
AlignmentPot.cc | 2023-10-09 17:54 | 703 | ||
AlignmentPot.hh | 2023-10-09 17:54 | 2.1K | ||
AlignmentWrite.cc | 2023-10-09 17:54 | 22K | ||
Alphabet.cc | 2023-10-09 17:54 | 3.5K | ||
Alphabet.hh | 2023-10-09 17:54 | 3.0K | ||
Centroid.cc | 2023-10-09 17:54 | 18K | ||
Centroid.hh | 2023-10-09 17:54 | 5.9K | ||
CyclicSubsetSeed.cc | 2023-10-09 17:54 | 6.0K | ||
CyclicSubsetSeed.hh | 2023-10-09 17:54 | 7.4K | ||
CyclicSubsetSeedData.hh | 2023-11-10 10:04 | 11K | ||
DiagonalTable.hh | 2023-10-09 17:54 | 1.7K | ||
GappedXdropAligner.cc | 2023-10-09 17:54 | 8.8K | ||
GappedXdropAligner.hh | 2023-10-09 17:54 | 14K | ||
GappedXdropAligner2q..> | 2023-10-09 17:54 | 5.3K | ||
GappedXdropAligner3f..> | 2023-10-09 17:54 | 10K | ||
GappedXdropAligner3f..> | 2023-10-09 17:54 | 5.0K | ||
GappedXdropAlignerDn..> | 2023-10-09 17:54 | 8.3K | ||
GappedXdropAlignerFr..> | 2023-10-09 17:54 | 6.5K | ||
GappedXdropAlignerIn..> | 2023-10-09 17:54 | 4.3K | ||
GappedXdropAlignerPs..> | 2023-10-09 17:54 | 5.4K | ||
GeneticCode.cc | 2023-10-09 17:54 | 6.3K | ||
GeneticCode.hh | 2023-10-09 17:54 | 3.4K | ||
GeneticCodeData.hh | 2023-11-10 10:05 | 8.5K | ||
GreedyXdropAligner.cc | 2023-10-09 17:54 | 5.5K | ||
GreedyXdropAligner.hh | 2023-10-09 17:54 | 2.2K | ||
LambdaCalculator.cc | 2023-10-09 17:54 | 6.3K | ||
LambdaCalculator.hh | 2023-10-09 17:54 | 2.4K | ||
LastEvaluer.cc | 2023-10-09 17:54 | 12K | ||
LastEvaluer.hh | 2023-10-09 17:54 | 4.3K | ||
LastEvaluerData.hh | 2023-10-09 17:54 | 5.8K | ||
LastalArguments.cc | 2023-10-09 17:54 | 25K | ||
LastalArguments.hh | 2023-10-09 17:54 | 3.9K | ||
LastdbArguments.cc | 2023-10-09 17:54 | 6.8K | ||
LastdbArguments.hh | 2023-10-09 17:54 | 1.6K | ||
Mmap.hh | 2023-10-09 17:54 | 2.3K | ||
MultiSequence.cc | 2023-10-09 17:54 | 4.9K | ||
MultiSequence.hh | 2023-10-09 17:54 | 8.3K | ||
MultiSequenceQual.cc | 2023-10-09 17:54 | 5.8K | ||
OneQualityScoreMatri..> | 2023-10-09 17:54 | 3.9K | ||
OneQualityScoreMatri..> | 2023-10-09 17:54 | 3.5K | ||
QualityPssmMaker.cc | 2023-10-09 17:54 | 3.4K | ||
QualityPssmMaker.hh | 2023-10-09 17:54 | 2.5K | ||
ScoreMatrix.cc | 2023-10-09 17:54 | 13K | ||
ScoreMatrix.hh | 2023-10-09 17:54 | 2.5K | ||
ScoreMatrixData.hh | 2023-11-10 10:04 | 12K | ||
ScoreMatrixRow.hh | 2023-10-09 17:54 | 919 | ||
SegmentPair.cc | 2023-10-09 17:54 | 633 | ||
SegmentPair.hh | 2023-10-09 17:54 | 1.3K | ||
SegmentPairPot.cc | 2023-10-09 17:54 | 4.2K | ||
SegmentPairPot.hh | 2023-10-09 17:54 | 2.8K | ||
SequenceFormat.hh | 2023-10-09 17:54 | 1.6K | ||
SubsetMinimizerFinde..> | 2023-10-09 17:54 | 1.2K | ||
SubsetMinimizerFinde..> | 2023-10-09 17:54 | 1.2K | ||
SubsetSuffixArray.cc | 2023-10-09 17:54 | 9.5K | ||
SubsetSuffixArray.hh | 2023-10-09 17:54 | 11K | ||
SubsetSuffixArraySea..> | 2023-10-09 17:54 | 16K | ||
SubsetSuffixArraySor..> | 2023-10-09 17:54 | 20K | ||
TantanMasker.cc | 2023-10-09 17:54 | 1.4K | ||
TantanMasker.hh | 2023-10-09 17:54 | 1.4K | ||
TwoQualityScoreMatri..> | 2023-10-09 17:54 | 6.0K | ||
TwoQualityScoreMatri..> | 2023-10-09 17:54 | 3.3K | ||
VectorOrMmap.hh | 2023-10-09 17:54 | 820 | ||
alp/ | 2023-11-13 13:32 | - | ||
cbrc_linalg.cc | 2023-10-09 17:54 | 827 | ||
cbrc_linalg.hh | 2023-10-09 17:54 | 643 | ||
dna_words_finder.cc | 2023-10-09 17:54 | 1.6K | ||
dna_words_finder.hh | 2023-10-09 17:54 | 3.0K | ||
fileMap.cc | 2023-10-09 17:54 | 1.8K | ||
fileMap.hh | 2023-10-09 17:54 | 613 | ||
gaplessPssmXdrop.hh | 2023-10-09 17:54 | 3.0K | ||
gaplessTwoQualityXdr..> | 2023-10-09 17:54 | 3.8K | ||
gaplessXdrop.hh | 2023-10-09 17:54 | 4.3K | ||
getoptUtil.hh | 2023-10-09 17:54 | 295 | ||
io.hh | 2023-10-09 17:54 | 1.0K | ||
last-merge-batches.c | 2023-10-09 17:54 | 2.6K | ||
last-pair-probs-main.cc | 2023-10-09 17:54 | 4.4K | ||
last-pair-probs.cc | 2023-10-09 17:54 | 20K | ||
last-pair-probs.hh | 2023-10-09 17:54 | 1.6K | ||
last.hh | 2023-10-09 17:54 | 2.8K | ||
lastal.cc | 2023-10-09 17:54 | 59K | ||
lastdb.cc | 2023-10-09 17:54 | 18K | ||
makefile | 2023-10-09 17:54 | 17K | ||
mcf_alignment_path_a..> | 2023-10-09 17:54 | 1.9K | ||
mcf_alignment_path_a..> | 2023-10-09 17:54 | 1.6K | ||
mcf_big_seq.hh | 2023-10-09 17:54 | 1.3K | ||
mcf_contiguous_queue.hh | 2023-10-09 17:54 | 590 | ||
mcf_frameshift_xdrop..> | 2023-10-09 17:54 | 15K | ||
mcf_frameshift_xdrop..> | 2023-10-09 17:54 | 4.1K | ||
mcf_gap_costs.cc | 2023-10-09 17:54 | 4.2K | ||
mcf_gap_costs.hh | 2023-10-09 17:54 | 2.3K | ||
mcf_packed_array.hh | 2023-10-09 17:54 | 3.4K | ||
mcf_reverse_queue.hh | 2023-10-09 17:54 | 1.1K | ||
mcf_simd.hh | 2023-10-09 17:54 | 13K | ||
mcf_substitution_mat..> | 2023-10-09 17:54 | 3.8K | ||
mcf_substitution_mat..> | 2023-10-09 17:54 | 2.6K | ||
mcf_zstream.hh | 2023-10-09 17:54 | 1.6K | ||
qualityScoreUtil.hh | 2023-10-09 17:54 | 2.3K | ||
split/ | 2023-11-13 13:32 | - | ||
stringify.hh | 2023-10-09 17:54 | 1.5K | ||
tantan.cc | 2023-10-09 17:54 | 17K | ||
tantan.hh | 2023-10-09 17:54 | 4.6K | ||
threadUtil.hh | 2023-10-09 17:54 | 778 | ||
version.hh | 2023-11-10 10:04 | 7 | ||
zio.hh | 2023-10-09 17:54 | 970 | ||