All statistics are based on contigs of size >= 500 bp, unless otherwise noted (e.g., "# contigs (>= 0 bp)" and "Total length (>= 0 bp)" include all contigs). Assembly meta_contigs_1 meta_contigs_2 # contigs (>= 0 bp) 45 32 # contigs (>= 1000 bp) 12 7 # contigs (>= 5000 bp) 5 6 # contigs (>= 10000 bp) 5 5 # contigs (>= 25000 bp) 3 3 # contigs (>= 50000 bp) 1 1 Total length (>= 0 bp) 186593 177895 Total length (>= 1000 bp) 173575 168101 Total length (>= 5000 bp) 160170 164654 Total length (>= 10000 bp) 160170 157666 Total length (>= 25000 bp) 131533 131139 Total length (>= 50000 bp) 55106 54221 # contigs 20 13 Largest contig 55106 54221 Total length 180190 172703 Reference length 179997 179997 N50 48458 49658 N90 3898 10428 auN 36838.5 38106.6 L50 2 2 L90 6 5 # misassemblies 2 4 # misassembled contigs 2 2 Misassembled contigs length 49610 54984 # local misassemblies 0 0 # scaffold gap ext. mis. 1 0 # scaffold gap loc. mis. 0 0 # unaligned mis. contigs 0 0 # unaligned contigs 2 + 0 part 1 + 0 part Unaligned length 2730 885 Genome fraction (%) 95.608 95.537 Duplication ratio 1.031 1.004 # N's per 100 kbp 18.87 0.00 # mismatches per 100 kbp 44.53 33.17 # indels per 100 kbp 3.38 0.00 Largest alignment 55106 49658 Total aligned length 177407 171818 NA50 37178 27260 NA90 3898 10428 auNA 32158.8 30524.4 LA50 2 3 LA90 7 6