All statistics are based on contigs of size >= 500 bp, unless otherwise noted (e.g., "# contigs (>= 0 bp)" and "Total length (>= 0 bp)" include all contigs). Assembly contigs_1 contigs_2 # contigs (>= 0 bp) 3 4 # contigs (>= 1000 bp) 3 2 # contigs (>= 5000 bp) 0 0 # contigs (>= 10000 bp) 0 0 # contigs (>= 25000 bp) 0 0 # contigs (>= 50000 bp) 0 0 Total length (>= 0 bp) 6710 5870 Total length (>= 1000 bp) 6710 5460 Total length (>= 5000 bp) 0 0 Total length (>= 10000 bp) 0 0 Total length (>= 25000 bp) 0 0 Total length (>= 50000 bp) 0 0 # contigs 3 2 Largest contig 3980 3360 Total length 6710 5460 Reference length 10000 10000 GC (%) 51.28 52.44 Reference GC (%) 52.07 52.07 N50 3980 3360 NG50 1610 2100 N90 1120 2100 NG90 - - auN 2934.0 2875.4 auNG 1968.7 1570.0 L50 1 1 LG50 2 2 L90 3 2 LG90 - - # misassemblies 1 2 # misassembled contigs 1 1 Misassembled contigs length 3980 3360 # local misassemblies 0 0 # scaffold gap ext. mis. 0 0 # scaffold gap loc. mis. 0 0 # unaligned mis. contigs 0 0 # unaligned contigs 0 + 0 part 0 + 0 part Unaligned length 0 0 Genome fraction (%) 67.100 54.600 Duplication ratio 1.000 1.000 # N's per 100 kbp 0.00 0.00 # mismatches per 100 kbp 0.00 0.00 # indels per 100 kbp 0.00 0.00 # genomic features 5 + 4 part 1 + 6 part # operons 1 + 1 part 0 + 2 part # predicted genes (unique) 7 6 # predicted genes (>= 0 bp) 6 + 1 part 5 + 1 part # predicted genes (>= 300 bp) 5 + 1 part 4 + 1 part # predicted genes (>= 1500 bp) 1 + 0 part 1 + 0 part # predicted genes (>= 3000 bp) 0 + 0 part 0 + 0 part Largest alignment 2030 2100 Total aligned length 6710 5459 NA50 1950 1471 NGA50 1610 700 NA90 1120 700 NGA90 - - auNA 1754.1 1552.2 auNGA 1177.0 847.5 LA50 2 2 LGA50 3 4 LA90 4 4 LGA90 - -