All statistics are based on contigs of size >= 500 bp, unless otherwise noted (e.g., "# contigs (>= 0 bp)" and "Total length (>= 0 bp)" include all contigs). Assembly # contigs (>= 0 bp) # contigs (>= 1000 bp) # contigs (>= 5000 bp) # contigs (>= 10000 bp) # contigs (>= 25000 bp) # contigs (>= 50000 bp) Total length (>= 0 bp) Total length (>= 1000 bp) Total length (>= 5000 bp) Total length (>= 10000 bp) Total length (>= 25000 bp) Total length (>= 50000 bp) # contigs Largest contig Total length Reference length GC (%) Reference GC (%) N50 NG50 N90 NG90 auN auNG L50 LG50 L90 LG90 # misassemblies # misassembled contigs Misassembled contigs length # local misassemblies # scaffold gap ext. mis. # scaffold gap loc. mis. # unaligned mis. contigs # unaligned contigs Unaligned length Genome fraction (%) Duplication ratio # N's per 100 kbp # mismatches per 100 kbp # indels per 100 kbp # genomic features # operons # predicted genes (unique) # predicted genes (>= 0 bp) # predicted genes (>= 300 bp) # predicted genes (>= 1500 bp) # predicted genes (>= 3000 bp) Largest alignment Total aligned length NA50 NGA50 NA90 NGA90 auNA auNGA LA50 LGA50 LA90 LGA90 contigs_1 3 3 0 0 0 0 6710 6710 0 0 0 0 3 3980 6710 10000 51.28 52.07 3980 1610 1120 - 2934.0 1968.7 1 2 3 - 1 1 3980 0 0 0 0 0 + 0 part 0 67.100 1.000 0.00 0.00 0.00 5 + 4 part 1 + 1 part 7 6 + 1 part 5 + 1 part 1 + 0 part 0 + 0 part 2030 6710 1950 1610 1120 - 1754.1 1177.0 2 3 4 - contigs_2 4 2 0 0 0 0 5870 5460 0 0 0 0 2 3360 5460 10000 52.44 52.07 3360 2100 2100 - 2875.4 1570.0 1 2 2 - 2 1 3360 0 0 0 0 0 + 0 part 0 54.600 1.000 0.00 0.00 0.00 1 + 6 part 0 + 2 part 6 5 + 1 part 4 + 1 part 1 + 0 part 0 + 0 part 2100 5459 1471 700 700 - 1552.2 847.5 2 4 4 -