# ssearch34 -H -m 9 -d 0 -Q shortset.fa testset.fa SSEARCH searches a sequence data bank version 3.4t24 June 23, 2004 Please cite: T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; W.R. Pearson (1991) Genomics 11:635-650 Query library shortset.fa vs testset.fa library searching testset.fa library 1>>>d1cbn__ 7.11.1.1.1 Crambin [abyssinian cabbage (Crambe abyssinica)] - 46 aa vs testset.fa library 13355 residues in 93 sequences Expectation_n fit: rho(ln(x))= 2.3138+/-0.0438; mu= 18.9049+/- 2.176 mean_var=37.1184+/-10.107, 0's: 0 Z-trim: 3 B-trim: 0 in 0/18 Lambda= 0.210513 Smith-Waterman (PGopt) (4.2 Mar 2004) function [BL50 matrix (15:-5)], gap-penalty: -12/-2 Scan time: 0.010 The best scores are: s-w bits E(93) %_id %_sim sw alen an0 ax0 pn0 px0 an1 ax1 pn1 px1 gapq gapl fs d1cbn__ 7.11.1.1.1 Crambin [abyssinian cabbage (C ( 46) 338 106.1 2.3e-27 1.000 1.000 338 46 1 46 1 46 1 46 1 46 0 0 0 d1isua_ 7.29.1.1.1 HIPIP (high potential iron pro ( 62) 55 20.4 0.2 0.370 0.556 55 27 22 46 1 46 30 56 1 62 2 0 0 d2erl__ 1.10.1.1.1 ER-1 [Euplotes raikovi] ( 40) 51 18.8 0.37 0.364 0.591 51 22 23 41 1 46 16 37 1 40 3 0 0 d1arb__ 2.29.1.1.1 Achromobacter protease [Achrom ( 263) 53 20.8 0.6 0.364 0.568 53 44 6 45 1 46 68 110 1 263 4 1 0 d2eng__ 2.33.1.1.1 Endoglucanase V [Humicola inso ( 205) 47 18.8 1.9 0.333 0.519 47 27 18 44 1 46 137 163 1 205 0 0 0 d1fus__ 4.1.1.1.2 RNase F1 [Fusarium moniliforme] ( 106) 45 17.7 2.1 0.244 0.511 45 45 2 46 1 46 4 44 1 106 0 4 0 d1rie__ 7.35.1.2.1 The rieske iron-sulfur protein ( 127) 44 17.6 2.8 0.400 0.600 44 20 25 44 1 46 69 87 1 127 0 1 0 d3ebx__ 7.5.1.1.1 Erabutoxin B (also neurotoxin B ( 62) 42 16.4 3 0.357 0.464 42 28 19 41 1 46 19 44 1 62 5 2 0 e1ben.2c1 7.1.1.1.2 Insulin [human (Homo sapiens) ( 21) 38 14.4 4 0.400 0.600 38 15 3 16 1 46 6 20 1 21 1 0 0 d3pte__ 5.3.1.1.1 D-ala carboxypeptidase/transpep ( 347) 43 18.0 5.5 0.346 0.538 43 26 21 46 1 46 189 211 1 347 0 3 0 d5p21__ 3.24.1.3.1 cH-p21 Ras protein [human (Hom ( 166) 41 16.8 5.8 0.385 0.615 41 13 28 40 1 46 39 51 1 166 0 0 0 d1tpg_1 7.10.1.1.13 (51-91) Plasminogen activator ( 41) 37 14.6 6.8 0.375 0.625 37 16 4 19 1 46 12 26 1 41 0 1 0 d2sn3__ 7.3.6.1.1 scorpion toxin [Centruroides sc ( 65) 37 14.9 8.4 0.320 0.480 37 25 16 40 1 46 46 65 1 65 0 5 0 d2sga__ 2.29.1.1.2 Protease A [Streptomyces grise ( 181) 39 16.3 9.1 0.714 0.714 39 7 14 20 1 46 129 135 1 181 0 0 0 d1lcpa2 3.50.1.3.1 (160-484) Leucine aminopeptida ( 325) 40 17.0 9.7 0.409 0.636 40 22 23 42 1 46 182 203 1 325 2 0 0 d1tgxc_ 7.5.1.1.2 gamma-Cardiotoxin [snake (Naja ( 60) 36 14.6 9.9 0.241 0.448 36 29 14 41 1 46 19 43 1 60 1 4 0 >>>d1cbn__, 46 aa vs testset.fa library 2>>>d2erl__ 1.10.1.1.1 ER-1 [Euplotes raikovi] - 40 aa vs testset.fa library 13355 residues in 93 sequences Expectation_n fit: rho(ln(x))= 3.3544+/-0.0208; mu= 9.6709+/- 0.998 mean_var=41.9829+/-15.940, 0's: 0 Z-trim: 1 B-trim: 5 in 1/17 Lambda= 0.197942 Smith-Waterman (PGopt) (4.2 Mar 2004) function [BL50 matrix (15:-5)], gap-penalty: -12/-2 Scan time: 0.010 The best scores are: s-w bits E(93) %_id %_sim sw alen an0 ax0 pn0 px0 an1 ax1 pn1 px1 gapq gapl fs d2erl__ 1.10.1.1.1 ER-1 [Euplotes raikovi] ( 40) 297 90.0 1.2e-22 1.000 1.000 297 40 1 40 1 40 1 40 1 40 0 0 0 d2sn3__ 7.3.6.1.1 scorpion toxin [Centruroides sc ( 65) 58 22.0 0.058 0.257 0.686 58 35 1 34 1 40 10 43 1 65 1 1 0 d1cbn__ 7.11.1.1.1 Crambin [abyssinian cabbage (C ( 46) 51 19.8 0.19 0.364 0.591 51 22 16 37 1 40 23 41 1 46 0 3 0 e1ben.2c1 7.1.1.1.2 Insulin [human (Homo sapiens) ( 21) 46 18.0 0.3 0.333 0.667 46 18 11 28 1 40 3 20 1 21 0 0 0 d7rsa__ 4.4.1.1.1 Ribonuclease A (also ribonuclea ( 124) 46 18.9 0.96 0.375 0.583 46 24 6 29 1 40 52 73 1 124 0 2 0 d1tpg_1 7.10.1.1.13 (51-91) Plasminogen activator ( 41) 42 17.2 1 0.308 0.538 42 26 3 28 1 40 12 34 1 41 0 3 0 d1lit__ 4.88.1.1.1 Lithostathine, inhibitor of st ( 131) 44 18.3 1.5 0.400 0.667 44 15 19 31 1 40 1 15 1 131 2 0 0 d3ebx__ 7.5.1.1.1 Erabutoxin B (also neurotoxin B ( 62) 41 17.1 1.6 0.259 0.519 41 27 9 35 1 40 7 31 1 62 0 2 0 d1bpi__ 7.6.1.1.1 Pancreatic trypsin inhibitor [b ( 58) 40 16.8 1.9 0.333 0.778 40 9 28 36 1 40 30 38 1 58 0 0 0 d1ptx__ 7.3.6.1.4 scorpion toxin [Androctonus aus ( 64) 39 16.5 2.5 0.324 0.588 39 34 10 39 1 40 16 49 1 64 4 0 0 d1isua_ 7.29.1.1.1 HIPIP (high potential iron pro ( 62) 38 16.2 2.9 0.250 0.625 38 16 22 37 1 40 19 34 1 62 0 0 0 d1poa__ 1.80.1.2.1 Snake phospholipase A2 [taiwan ( 118) 40 17.1 3 0.323 0.516 40 31 1 31 1 40 41 63 1 118 0 8 0 d1amm_1 2.9.1.1.1 (1-85) gamma-Crystallin [bovine ( 85) 38 16.4 3.6 0.300 0.500 38 30 9 30 1 40 14 43 1 85 8 0 0 d1amm_2 2.9.1.1.1 (86-174) gamma-Crystallin [bovi ( 89) 38 16.4 3.7 0.353 0.588 38 17 21 37 1 40 9 25 1 89 0 0 0 d1mla_2 4.31.18.1.1 (126-195) Probable ACP-bindin ( 70) 36 15.7 4.7 0.833 1.000 36 6 2 7 1 40 19 24 1 70 0 0 0 d4ptp__ 2.29.1.2.1 Trypsin(ogen) [bovine (Bos tau ( 223) 39 17.2 5.5 0.417 0.750 39 12 2 13 1 40 108 119 1 223 0 0 0 d1rcf__ 3.13.4.1.3 Flavodoxin [Anabaena 7120] ( 169) 38 16.7 5.6 0.364 0.727 38 11 29 39 1 40 47 57 1 169 0 0 0 d1arb__ 2.29.1.1.1 Achromobacter protease [Achrom ( 263) 39 17.2 6.1 0.353 0.647 39 17 11 25 1 40 2 18 1 263 2 0 0 d1pls__ 2.35.1.1.5 Pleckstrin, N-terminal domain ( 113) 35 15.7 7.7 0.667 1.000 35 6 7 12 1 40 99 104 1 113 0 0 0 d1tgxc_ 7.5.1.1.2 gamma-Cardiotoxin [snake (Naja ( 60) 32 14.5 9.1 0.263 0.526 32 19 19 37 1 40 14 30 1 60 0 2 0 d2eng__ 2.33.1.1.1 Endoglucanase V [Humicola inso ( 205) 36 16.3 9.3 0.462 0.538 36 13 25 37 1 40 191 203 1 205 0 0 0 >>>d2erl__, 40 aa vs testset.fa library 3>>>d8rxna_ 7.34.3.1.1 Rubredoxin [Desulfovibrio vulgaris] - 52 aa vs testset.fa library 13355 residues in 93 sequences Expectation_n fit: rho(ln(x))= 2.0499+/-0.0385; mu= 21.9713+/- 1.974 mean_var=38.1093+/-11.756, 0's: 0 Z-trim: 1 B-trim: 2 in 1/17 Lambda= 0.207758 Smith-Waterman (PGopt) (4.2 Mar 2004) function [BL50 matrix (15:-5)], gap-penalty: -12/-2 Scan time: 0.010 The best scores are: s-w bits E(93) %_id %_sim sw alen an0 ax0 pn0 px0 an1 ax1 pn1 px1 gapq gapl fs d8rxna_ 7.34.3.1.1 Rubredoxin [Desulfovibrio vulg ( 52) 392 120.7 1.2e-31 1.000 1.000 392 52 1 52 1 52 1 52 1 52 0 0 0 d1bbo_1 7.30.1.1.8 (1-27) Enhancer binding protei ( 27) 55 19.2 0.22 0.429 0.643 55 14 3 16 1 52 1 14 1 27 0 0 0 d8tlne1 1.47.1.1.2 (156-316) Thermolysin [Bacillu ( 161) 53 20.0 0.72 0.500 0.700 53 20 14 32 1 52 52 71 1 161 1 0 0 d1utg__ 1.60.1.1.1 Uteroglobin [Rabbit (Oryctolag ( 70) 49 18.2 1.2 0.304 0.609 49 23 12 34 1 52 27 49 1 70 0 0 0 d1rie__ 7.35.1.2.1 The rieske iron-sulfur protein ( 127) 44 17.1 4.1 0.391 0.478 44 23 4 26 1 52 87 108 1 127 0 1 0 d1ra9__ 3.51.1.1.1 Dihydrofolate reductase, proka ( 159) 44 17.3 4.5 0.444 0.500 44 18 21 37 1 52 116 133 1 159 1 0 0 d2ctb__ 3.50.1.1.1 Carboxypeptidase A [bovine (Bo ( 307) 45 18.2 4.9 0.364 0.636 45 22 17 38 1 52 43 64 1 307 0 0 0 d1igd__ 4.11.1.1.1 Immunoglobulin-binding protein ( 61) 40 15.3 6.8 0.500 0.667 40 12 21 32 1 52 41 52 1 61 0 0 0 d2eng__ 2.33.1.1.1 Endoglucanase V [Humicola inso ( 205) 42 16.9 7.5 0.235 0.500 42 34 9 42 1 52 130 162 1 205 0 1 0 d1hms__ 2.39.1.2.1 Muscle fatty acid binding prot ( 131) 41 16.3 7.7 0.364 0.636 41 22 10 31 1 52 67 87 1 131 0 1 0 d1ptx__ 7.3.6.1.4 scorpion toxin [Androctonus aus ( 64) 39 15.1 8.5 0.375 0.500 39 16 24 39 1 52 1 16 1 64 0 0 0 d1ctj__ 1.3.1.1.1 Cytochrome c6 (synonym: cytochr ( 89) 39 15.4 9.7 0.400 0.600 39 15 5 19 1 52 73 87 1 89 0 0 0 >>>d8rxna_, 52 aa vs testset.fa library 4>>>d1lkka_ 4.47.1.1.1 p56-lck tyrosine kinase [human (Homo sapiens)] - 105 aa vs testset.fa library 13355 residues in 93 sequences Expectation_n fit: rho(ln(x))= 5.7678+/-0.0487; mu= 6.0174+/- 2.315 mean_var=43.5373+/-14.195, 0's: 0 Z-trim: 2 B-trim: 3 in 1/18 Lambda= 0.194376 Smith-Waterman (PGopt) (4.2 Mar 2004) function [BL50 matrix (15:-5)], gap-penalty: -12/-2 Scan time: 0.020 The best scores are: s-w bits E(93) %_id %_sim sw alen an0 ax0 pn0 px0 an1 ax1 pn1 px1 gapq gapl fs d1lkka_ 4.47.1.1.1 p56-lck tyrosine kinase [human ( 105) 719 206.7 6.3e-57 1.000 1.000 719 105 1 105 1 105 1 105 1 105 0 0 0 d1bpi__ 7.6.1.1.1 Pancreatic trypsin inhibitor [b ( 58) 68 24.2 0.029 0.370 0.630 68 27 70 96 1 105 4 30 1 58 0 0 0 d1cus__ 3.13.7.1.1 Cutinase [fungus (Fusarium sol ( 197) 64 22.9 0.25 0.250 0.587 64 92 7 97 1 105 85 163 1 197 1 13 0 d1hms__ 2.39.1.2.1 Muscle fatty acid binding prot ( 131) 55 20.4 0.9 0.349 0.674 55 43 26 68 1 105 53 89 1 131 0 6 0 d2ctb__ 3.50.1.1.1 Carboxypeptidase A [bovine (Bo ( 307) 59 21.4 1.1 0.222 0.556 59 72 15 83 1 105 228 292 1 307 3 7 0 d1plc__ 2.5.1.1.2 Plastocyanin [poplar (Populus n ( 99) 51 19.4 1.4 0.306 0.667 51 36 39 74 1 105 52 86 1 99 0 1 0 d1xsoa_ 2.1.7.1.3 Cu,Zn superoxide dismutase, SOD ( 150) 51 19.3 2.3 0.395 0.684 51 38 39 72 1 105 8 45 1 150 4 0 0 d3pte__ 5.3.1.1.1 D-ala carboxypeptidase/transpep ( 347) 53 19.7 3.9 0.462 0.692 53 13 70 82 1 105 197 209 1 347 0 0 0 d1burd1 3.1.9.1.2 (137-460) Ribulose 1,5-bisphosp ( 324) 52 19.4 4.4 0.368 0.579 52 19 83 101 1 105 86 104 1 324 0 0 0 d3sdhb_ 1.1.1.1.1 Hemoglobin I [ark clam (Scaphar ( 145) 47 18.2 4.7 0.247 0.584 47 89 15 96 1 105 4 91 1 145 7 1 0 d1ycc__ 1.3.1.1.4 Mitochondrial cytochrome c [bak ( 108) 45 17.7 5 0.253 0.506 45 83 25 104 1 105 36 108 1 108 3 10 0 d1ifc__ 2.39.1.2.2 Intestinal fatty acid binding ( 131) 46 17.9 5.1 0.379 0.655 46 29 61 89 1 105 92 118 1 131 0 2 0 d1lam_1 3.33.1.1.1 (1-159) Leucine aminopeptidase ( 159) 47 18.2 5.2 0.275 0.549 47 51 33 83 1 105 11 59 1 159 0 2 0 d8tlne1 1.47.1.1.2 (156-316) Thermolysin [Bacillu ( 161) 46 17.9 6.3 0.304 0.536 46 56 25 76 1 105 26 81 1 161 4 0 0 d2prk__ 3.26.1.1.6 Proteinase K [fungus (Tritirac ( 279) 49 18.6 6.5 0.277 0.523 49 65 31 94 1 105 10 66 1 279 1 8 0 d1aab__ 1.17.1.1.1 HMG1, fragments A and B [rat/h ( 83) 41 16.6 7.9 0.304 0.696 41 23 8 30 1 105 37 59 1 83 0 0 0 d2eng__ 2.33.1.1.1 Endoglucanase V [Humicola inso ( 205) 46 17.8 8.2 0.304 0.739 46 23 24 46 1 105 97 119 1 205 0 0 0 d1hfc__ 4.46.1.5.1 Fibroblast collagenase [human ( 157) 44 17.3 8.9 0.288 0.525 44 59 2 53 1 105 93 151 1 157 7 0 0 d1eco__ 1.1.1.1.13 Erythrocruorin [Midge (Chirono ( 136) 43 17.1 9.2 0.237 0.537 43 80 8 80 1 105 38 116 1 136 7 1 0 >>>d1lkka_, 105 aa vs testset.fa library 5>>>d1ctj__ 1.3.1.1.1 Cytochrome c6 (synonym: cytochrome c553) [(Monoraphidium braunii)] - 89 aa vs testset.fa library 13355 residues in 93 sequences Expectation_n fit: rho(ln(x))= 7.3875+/-0.0341; mu= -0.5633+/- 1.525 mean_var=44.4193+/-13.668, 0's: 0 Z-trim: 1 B-trim: 9 in 1/18 Lambda= 0.192437 Smith-Waterman (PGopt) (4.2 Mar 2004) function [BL50 matrix (15:-5)], gap-penalty: -12/-2 Scan time: 0.010 The best scores are: s-w bits E(93) %_id %_sim sw alen an0 ax0 pn0 px0 an1 ax1 pn1 px1 gapq gapl fs d1ctj__ 1.3.1.1.1 Cytochrome c6 (synonym: cytochr ( 89) 613 174.9 1.6e-47 1.000 1.000 613 89 1 89 1 89 1 89 1 89 0 0 0 d1ezm_1 1.47.1.1.1 (154-298) Elastase [Pseudomona ( 145) 68 23.3 0.11 0.333 0.593 68 54 19 67 1 89 5 55 1 145 5 3 0 d1ycc__ 1.3.1.1.4 Mitochondrial cytochrome c [bak ( 108) 57 20.4 0.63 0.346 0.577 57 26 7 29 1 89 11 36 1 108 3 0 0 d1cpq__ 1.20.3.2.5 Cytochrome c' [(Rhodobacter ca ( 129) 53 19.2 1.7 0.471 0.706 53 17 5 19 1 89 106 122 1 129 2 0 0 d1mla_2 4.31.18.1.1 (126-195) Probable ACP-bindin ( 70) 47 17.9 2.3 0.462 0.923 47 13 16 28 1 89 54 66 1 70 0 0 0 d1tca__ 3.48.1.7.1 Triacylglycerol lipase [yeast ( 317) 58 20.1 2.4 0.267 0.533 58 75 17 87 1 89 89 161 1 317 4 2 0 d1rcf__ 3.13.4.1.3 Flavodoxin [Anabaena 7120] ( 169) 48 17.7 6.5 0.262 0.541 48 61 23 79 1 89 27 85 1 169 4 2 0 d8rxna_ 7.34.3.1.1 Rubredoxin [Desulfovibrio vulg ( 52) 39 15.9 6.8 0.400 0.600 39 15 73 87 1 89 5 19 1 52 0 0 0 d1fus__ 4.1.1.1.2 RNase F1 [Fusarium moniliforme] ( 106) 44 16.8 7.2 0.360 0.640 44 25 8 27 1 89 76 100 1 106 5 0 0 e1ben.2d1 7.1.1.1.2 Insulin [human (Homo sapiens) ( 28) 34 14.9 7.4 0.304 0.652 34 23 37 59 1 89 2 23 1 28 0 1 0 d1isua_ 7.29.1.1.1 HIPIP (high potential iron pro ( 62) 39 15.8 8.7 0.667 0.889 39 9 20 28 1 89 36 44 1 62 0 0 0 e1ben.2c1 7.1.1.1.2 Insulin [human (Homo sapiens) ( 21) 31 14.2 8.7 0.667 1.000 31 6 51 56 1 89 13 18 1 21 0 0 0 d1amm_1 2.9.1.1.1 (1-85) gamma-Crystallin [bovine ( 85) 41 16.1 9.2 0.357 0.571 41 14 11 24 1 89 11 24 1 85 0 0 0 d1xsoa_ 2.1.7.1.3 Cu,Zn superoxide dismutase, SOD ( 150) 45 16.9 9.6 0.224 0.653 45 49 41 86 1 89 7 54 1 150 3 1 0 d1cus__ 3.13.7.1.1 Cutinase [fungus (Fusarium sol ( 197) 47 17.3 9.6 0.278 0.557 47 97 5 88 1 89 46 140 1 197 13 2 0 >>>d1ctj__, 89 aa vs testset.fa library 6>>>d1bpi__ 7.6.1.1.1 Pancreatic trypsin inhibitor [bovine (Bos taurus)] - 58 aa vs testset.fa library 13355 residues in 93 sequences Expectation_n fit: rho(ln(x))= -0.4844+/-0.0241; mu= 31.2372+/- 1.074 mean_var=51.5607+/-17.615, 0's: 0 Z-trim: 2 B-trim: 0 in 0/19 Lambda= 0.178614 Smith-Waterman (PGopt) (4.2 Mar 2004) function [BL50 matrix (15:-5)], gap-penalty: -12/-2 Scan time: 0.000 The best scores are: s-w bits E(93) %_id %_sim sw alen an0 ax0 pn0 px0 an1 ax1 pn1 px1 gapq gapl fs d1bpi__ 7.6.1.1.1 Pancreatic trypsin inhibitor [b ( 58) 434 116.8 2.1e-30 1.000 1.000 434 58 1 58 1 58 1 58 1 58 0 0 0 d1lkka_ 4.47.1.1.1 p56-lck tyrosine kinase [human ( 105) 68 23.5 0.049 0.370 0.630 68 27 4 30 1 58 70 96 1 105 0 0 0 d1burd1 3.1.9.1.2 (137-460) Ribulose 1,5-bisphosp ( 324) 58 22.6 0.27 0.345 0.586 58 29 4 31 1 58 72 100 1 324 1 0 0 d1ifc__ 2.39.1.2.2 Intestinal fatty acid binding ( 131) 49 18.9 1.4 0.571 0.786 49 14 29 42 1 58 113 126 1 131 0 0 0 d2prk__ 3.26.1.1.6 Proteinase K [fungus (Tritirac ( 279) 46 19.3 2.3 0.250 0.611 46 36 21 54 1 58 23 58 1 279 2 0 0 d2olba_ 3.68.1.1.1 Oligo-peptide binding protein ( 517) 44 19.8 3.1 0.429 0.500 44 14 2 15 1 58 313 326 1 517 0 0 0 d1isua_ 7.29.1.1.1 HIPIP (high potential iron pro ( 62) 44 16.4 3.7 0.333 0.556 44 27 8 34 1 58 34 59 1 62 0 1 0 d2eng__ 2.33.1.1.1 Endoglucanase V [Humicola inso ( 205) 43 18.1 3.9 0.269 0.500 43 52 3 50 1 58 128 174 1 205 4 5 0 d1ezm_1 1.47.1.1.1 (154-298) Elastase [Pseudomona ( 145) 42 17.3 4.8 0.297 0.541 42 37 20 53 1 58 103 135 1 145 3 4 0 d2mhr__ 1.20.4.1.4 Myohemerythin [sipunculan worm ( 118) 40 16.4 7 0.556 0.778 40 9 45 53 1 58 29 37 1 118 0 0 0 d2erl__ 1.10.1.1.1 ER-1 [Euplotes raikovi] ( 40) 40 14.7 7.6 0.333 0.778 40 9 30 38 1 58 28 36 1 40 0 0 0 d4ptp__ 2.29.1.2.1 Trypsin(ogen) [bovine (Bos tau ( 223) 39 17.2 7.8 0.211 0.447 39 38 2 37 1 58 132 169 1 223 2 0 0 d1ezm_2 4.46.1.1.1 (1-153) Elastase [Pseudomonas ( 153) 39 16.6 8.1 0.207 0.483 39 29 9 37 1 58 53 81 1 153 0 0 0 d1flp__ 1.1.1.1.2 Hemoglobin I [clam (Lucina pect ( 142) 39 16.5 8.1 0.308 0.462 39 39 25 57 1 58 84 122 1 142 6 0 0 d1tca__ 3.48.1.7.1 Triacylglycerol lipase [yeast ( 317) 38 17.5 9 0.538 0.615 38 13 46 58 1 58 13 25 1 317 0 0 0 >>>d1bpi__, 58 aa vs testset.fa library 7>>>d1rgea_ 4.1.1.1.1 RNase Sa [Streptomyces aureofaciens] - 96 aa vs testset.fa library 13355 residues in 93 sequences Expectation_n fit: rho(ln(x))= 8.4282+/-0.0346; mu= -7.1760+/- 1.706 mean_var=26.6967+/- 8.972, 0's: 0 Z-trim: 1 B-trim: 2 in 1/17 Lambda= 0.248225 Smith-Waterman (PGopt) (4.2 Mar 2004) function [BL50 matrix (15:-5)], gap-penalty: -12/-2 Scan time: 0.010 The best scores are: s-w bits E(93) %_id %_sim sw alen an0 ax0 pn0 px0 an1 ax1 pn1 px1 gapq gapl fs d1rgea_ 4.1.1.1.1 RNase Sa [Streptomyces aureofac ( 96) 643 233.1 5.9e-65 1.000 1.000 643 96 1 96 1 96 1 96 1 96 0 0 0 d1burs_ 4.35.1.1.2 Ribulose 1,5-bisphosphate carb ( 123) 50 20.3 0.84 0.340 0.528 50 53 8 52 1 96 15 62 1 123 8 5 0 d1jbc__ 2.18.1.1.1 Concanavalin A [jack bean (Can ( 237) 55 21.1 0.96 0.410 0.590 55 39 14 50 1 96 192 227 1 237 2 3 0 d1aac__ 2.5.1.1.1 Amicyanin [Paracoccus denitrifi ( 105) 48 19.8 0.99 0.250 0.482 48 56 33 85 1 96 41 95 1 105 3 1 0 d1fus__ 4.1.1.1.2 RNase F1 [Fusarium moniliforme] ( 106) 45 18.8 2.1 0.239 0.630 45 46 23 67 1 96 33 71 1 106 1 7 0 d1pfsa_ 2.24.6.1.2 Gene V protein [Pseudomonas ph ( 78) 42 18.2 2.3 0.400 0.560 42 25 25 49 1 96 33 53 1 78 0 4 0 d1whi__ 2.23.1.1.1 Ribosomal protein L14 [Bacillu ( 122) 44 18.2 3.6 0.319 0.553 44 47 35 78 1 96 61 105 1 122 3 2 0 d1cbn__ 7.11.1.1.1 Crambin [abyssinian cabbage (C ( 46) 35 16.5 4.4 0.360 0.440 35 25 44 66 1 96 18 42 1 46 2 0 0 e1ben.2c1 7.1.1.1.2 Insulin [human (Homo sapiens) ( 21) 27 14.9 6.1 0.333 0.833 27 6 91 96 1 96 2 7 1 21 0 0 0 d8tlne1 1.47.1.1.2 (156-316) Thermolysin [Bacillu ( 161) 44 17.7 6.3 0.232 0.482 44 56 34 86 1 96 41 96 1 161 3 0 0 d1mla_1 3.12.1.1.1 (1-125,196-305) Catalytic doma ( 236) 47 18.2 6.7 0.371 0.486 47 35 38 71 1 96 185 218 1 236 1 1 0 d1ezm_1 1.47.1.1.1 (154-298) Elastase [Pseudomona ( 145) 42 17.2 8.3 0.318 0.636 42 22 75 96 1 96 123 144 1 145 0 0 0 d1arb__ 2.29.1.1.1 Achromobacter protease [Achrom ( 263) 47 18.0 8.3 0.286 0.657 47 35 2 36 1 96 2 34 1 263 0 2 0 d1xyzb_ 3.1.1.3.1 Xylanase XynZ (family F) [Clost ( 320) 48 18.1 9.7 0.357 0.571 48 28 11 38 1 96 179 206 1 320 0 0 0 d1igd__ 4.11.1.1.1 Immunoglobulin-binding protein ( 61) 34 15.7 9.8 0.200 0.600 34 35 55 85 1 96 8 42 1 61 4 0 0 >>>d1rgea_, 96 aa vs testset.fa library 8>>>d1cus__ 3.13.7.1.1 Cutinase [fungus (Fusarium solani, subsp. pisi)] - 197 aa vs testset.fa library 13355 residues in 93 sequences Expectation_n fit: rho(ln(x))= 12.6187+/-0.0302; mu= -19.9093+/- 1.294 mean_var=61.1400+/-18.142, 0's: 0 Z-trim: 1 B-trim: 0 in 0/19 Lambda= 0.164026 Smith-Waterman (PGopt) (4.2 Mar 2004) function [BL50 matrix (15:-5)], gap-penalty: -12/-2 Scan time: 0.030 The best scores are: s-w bits E(93) %_id %_sim sw alen an0 ax0 pn0 px0 an1 ax1 pn1 px1 gapq gapl fs d1cus__ 3.13.7.1.1 Cutinase [fungus (Fusarium sol ( 197) 1291 310.5 1.2e-87 1.000 1.000 1291 197 1 197 1 197 1 197 1 197 0 0 0 d1lkka_ 4.47.1.1.1 p56-lck tyrosine kinase [human ( 105) 64 21.1 0.84 0.272 0.543 64 92 85 163 1 197 7 97 1 105 13 1 0 d8tlne1 1.47.1.1.2 (156-316) Thermolysin [Bacillu ( 161) 61 19.8 3.3 0.235 0.523 61 153 32 181 1 197 17 159 1 161 3 10 0 d1aab__ 1.17.1.1.1 HMG1, fragments A and B [rat/h ( 83) 52 18.7 3.6 0.275 0.525 52 40 66 105 1 197 3 42 1 83 0 0 0 d1rcf__ 3.13.4.1.3 Flavodoxin [Anabaena 7120] ( 169) 60 19.4 4.2 0.250 0.558 60 104 38 133 1 197 17 119 1 169 8 1 0 d1cpq__ 1.20.3.2.5 Cytochrome c' [(Rhodobacter ca ( 129) 55 18.7 5.5 0.298 0.544 55 57 17 69 1 197 50 105 1 129 4 1 0 d1ptf__ 4.48.1.1.2 Histidine-containing phosphoca ( 87) 50 18.1 5.5 0.216 0.608 50 51 67 117 1 197 32 81 1 87 0 1 0 d2mcm__ 2.1.6.1.1 Macromycin [Streptomyces macrom ( 112) 52 18.2 6.6 0.231 0.596 52 52 28 79 1 197 40 90 1 112 0 1 0 d2alp__ 2.29.1.1.3 alpha-Lytic protease [Lysobact ( 198) 59 19.0 6.8 0.233 0.586 59 116 11 107 1 197 12 127 1 198 19 0 0 d1mla_1 3.12.1.1.1 (1-125,196-305) Catalytic doma ( 236) 61 19.2 7.1 0.272 0.570 61 114 20 122 1 197 4 110 1 236 11 7 0 d1tgxc_ 7.5.1.1.2 gamma-Cardiotoxin [snake (Naja ( 60) 43 17.0 7.9 0.333 0.444 43 27 155 181 1 197 14 37 1 60 0 3 0 d1ctj__ 1.3.1.1.1 Cytochrome c6 (synonym: cytochr ( 89) 47 17.4 9.2 0.278 0.557 47 97 46 140 1 197 5 88 1 89 2 13 0 >>>d1cus__, 197 aa vs testset.fa library 9>>>d1arb__ 2.29.1.1.1 Achromobacter protease [Achromobacter lyticus, strain m497-1] - 263 aa vs testset.fa library 13355 residues in 93 sequences Expectation_n fit: rho(ln(x))= 8.5459+/-0.0158; mu= 0.2421+/- 0.678 mean_var=65.7440+/-19.828, 0's: 0 Z-trim: 3 B-trim: 0 in 0/18 Lambda= 0.158178 Smith-Waterman (PGopt) (4.2 Mar 2004) function [BL50 matrix (15:-5)], gap-penalty: -12/-2 Scan time: 0.030 The best scores are: s-w bits E(93) %_id %_sim sw alen an0 ax0 pn0 px0 an1 ax1 pn1 px1 gapq gapl fs d1arb__ 2.29.1.1.1 Achromobacter protease [Achrom ( 263) 1803 417.4 1.4e-119 1.000 1.000 1803 263 1 263 1 263 1 263 1 263 0 0 0 d4ptp__ 2.29.1.2.1 Trypsin(ogen) [bovine (Bos tau ( 223) 93 27.3 0.033 0.207 0.502 93 217 31 234 1 263 20 215 1 223 13 21 0 d2sga__ 2.29.1.1.2 Protease A [Streptomyces grise ( 181) 89 26.5 0.047 0.189 0.576 89 132 95 221 1 263 36 163 1 181 5 4 0 d2prk__ 3.26.1.1.6 Proteinase K [fungus (Tritirac ( 279) 73 22.6 1.1 0.228 0.495 73 206 4 178 1 263 32 230 1 279 31 7 0 d2sn3__ 7.3.6.1.1 scorpion toxin [Centruroides sc ( 65) 59 20.2 1.3 0.312 0.562 59 32 206 237 1 263 19 50 1 65 0 0 0 d1xnb__ 2.18.1.8.1 Xylanase II [Bacillus circulan ( 185) 66 21.2 1.8 0.193 0.500 66 166 90 247 1 263 1 164 1 185 8 2 0 d1epne_ 2.32.1.2.1 Endothiapepsin [chestnut bligh ( 330) 70 21.8 2.1 0.275 0.541 70 109 162 261 1 263 25 125 1 330 9 8 0 d1cbn__ 7.11.1.1.1 Crambin [abyssinian cabbage (C ( 46) 53 19.0 2.2 0.364 0.568 53 44 68 110 1 263 6 45 1 46 1 4 0 d1lit__ 4.88.1.1.1 Lithostathine, inhibitor of st ( 131) 61 20.3 2.5 0.229 0.505 61 105 74 176 1 263 6 96 1 131 2 14 0 d8tlne1 1.47.1.1.2 (156-316) Thermolysin [Bacillu ( 161) 59 19.7 4.5 0.177 0.522 59 113 119 231 1 263 9 112 1 161 0 9 0 d2alp__ 2.29.1.1.3 alpha-Lytic protease [Lysobact ( 198) 60 19.8 5.1 0.209 0.516 60 182 52 230 1 263 31 184 1 198 3 28 0 d1fus__ 4.1.1.1.2 RNase F1 [Fusarium moniliforme] ( 106) 54 18.8 5.6 0.194 0.548 54 93 108 196 1 263 5 97 1 106 4 0 0 d1cus__ 3.13.7.1.1 Cutinase [fungus (Fusarium sol ( 197) 57 19.1 8 0.500 0.857 57 14 28 41 1 263 154 167 1 197 0 0 0 d1csee_ 3.26.1.1.1 Subtilisin Carlsberg [Bacillus ( 274) 59 19.4 9 0.254 0.522 59 67 102 165 1 263 201 253 1 274 3 14 0 d3pte__ 5.3.1.1.1 D-ala carboxypeptidase/transpep ( 347) 61 19.8 9 0.229 0.534 61 118 70 181 1 263 140 245 1 347 6 12 0 >>>d1arb__, 263 aa vs testset.fa library 10>>>d1igd__ 4.11.1.1.1 Immunoglobulin-binding protein G, separate domains [group G streptococcus (Streptomyces griseus)] - 61 aa vs testset.fa library 13355 residues in 93 sequences Expectation_n fit: rho(ln(x))= 8.6855+/-0.0218; mu= -12.1134+/- 1.039 mean_var=48.1471+/-14.933, 0's: 0 Z-trim: 1 B-trim: 0 in 0/19 Lambda= 0.184837 Smith-Waterman (PGopt) (4.2 Mar 2004) function [BL50 matrix (15:-5)], gap-penalty: -12/-2 Scan time: 0.010 The best scores are: s-w bits E(93) %_id %_sim sw alen an0 ax0 pn0 px0 an1 ax1 pn1 px1 gapq gapl fs d1igd__ 4.11.1.1.1 Immunoglobulin-binding protein ( 61) 383 108.5 7.4e-28 1.000 1.000 383 61 1 61 1 61 1 61 1 61 0 0 0 d1mnta_ 1.32.1.1.2 Mnt repressor [Salmonella bact ( 66) 47 18.9 0.78 0.235 0.529 47 34 8 41 1 61 21 54 1 66 0 0 0 d4lzm__ 4.2.1.3.1 Phage T4 lysozyme [Escherichia ( 162) 51 19.1 1.6 0.308 0.615 51 39 19 57 1 61 30 67 1 162 0 1 0 d1flp__ 1.1.1.1.2 Hemoglobin I [clam (Lucina pect ( 142) 49 18.7 1.8 0.308 0.615 49 39 15 49 1 61 90 128 1 142 4 0 0 d8rxna_ 7.34.3.1.1 Rubredoxin [Desulfovibrio vulg ( 52) 40 17.2 1.9 0.500 0.667 40 12 41 52 1 61 21 32 1 52 0 0 0 d1fus__ 4.1.1.1.2 RNase F1 [Fusarium moniliforme] ( 106) 46 18.2 2 0.314 0.629 46 35 16 50 1 61 4 38 1 106 0 0 0 d8tlne2 4.46.1.1.2 (1-155) Thermolysin [Bacillus ( 155) 49 18.7 2.1 0.450 0.650 49 20 38 56 1 61 29 48 1 155 1 0 0 d1epne_ 2.32.1.2.1 Endothiapepsin [chestnut bligh ( 330) 54 19.3 2.8 0.302 0.674 54 43 5 47 1 61 89 125 1 330 0 6 0 d1lam_1 3.33.1.1.1 (1-159) Leucine aminopeptidase ( 159) 46 17.8 3.8 0.438 0.750 46 16 37 52 1 61 117 132 1 159 0 0 0 d1cpq__ 1.20.3.2.5 Cytochrome c' [(Rhodobacter ca ( 129) 43 17.2 4.7 0.450 0.800 43 20 14 32 1 61 18 37 1 129 1 0 0 d2alp__ 2.29.1.1.3 alpha-Lytic protease [Lysobact ( 198) 45 17.4 6.4 0.357 0.571 45 28 19 46 1 61 112 139 1 198 0 0 0 d193l__ 4.2.1.2.1 Lysozyme [chicken (Gallus gallu ( 129) 41 16.7 6.7 0.273 0.545 41 33 18 50 1 61 21 53 1 129 0 0 0 d1isua_ 7.29.1.1.1 HIPIP (high potential iron pro ( 62) 34 15.5 7.5 0.250 0.432 34 44 1 44 1 61 6 49 1 62 0 0 0 d1aab__ 1.17.1.1.1 HMG1, fragments A and B [rat/h ( 83) 36 15.7 8.2 0.226 0.613 36 31 15 45 1 61 6 36 1 83 0 0 0 d1cbn__ 7.11.1.1.1 Crambin [abyssinian cabbage (C ( 46) 30 14.6 9.6 0.353 0.588 30 17 4 20 1 61 27 43 1 46 0 0 0 d1hms__ 2.39.1.2.1 Muscle fatty acid binding prot ( 131) 39 16.1 9.8 0.357 0.571 39 28 6 33 1 61 103 130 1 131 0 0 0 >>>d1igd__, 61 aa vs testset.fa library 11>>>d1csee_ 3.26.1.1.1 Subtilisin Carlsberg [Bacillus subtilis] - 274 aa vs testset.fa library 13355 residues in 93 sequences Expectation_n fit: rho(ln(x))= 15.0570+/- 0.049; mu= -31.6935+/- 2.248 mean_var=78.9700+/-28.401, 0's: 0 Z-trim: 2 B-trim: 3 in 1/18 Lambda= 0.144326 Smith-Waterman (PGopt) (4.2 Mar 2004) function [BL50 matrix (15:-5)], gap-penalty: -12/-2 Scan time: 0.040 The best scores are: s-w bits E(93) %_id %_sim sw alen an0 ax0 pn0 px0 an1 ax1 pn1 px1 gapq gapl fs d1csee_ 3.26.1.1.1 Subtilisin Carlsberg [Bacillus ( 274) 1717 363.5 2.6e-103 1.000 1.000 1717 274 1 274 1 274 1 274 1 274 0 0 0 d2prk__ 3.26.1.1.6 Proteinase K [fungus (Tritirac ( 279) 481 106.2 7.9e-26 0.373 0.688 481 260 1 246 1 274 2 250 1 279 14 11 0 d3chy__ 3.13.2.1.1 CheY protein [Escherichia coli ( 128) 79 23.8 0.23 0.227 0.667 79 66 92 156 1 274 39 104 1 128 1 0 0 d2alp__ 2.29.1.1.3 alpha-Lytic protease [Lysobact ( 198) 81 23.4 0.44 0.266 0.597 81 154 42 184 1 274 21 168 1 198 11 6 0 d2sga__ 2.29.1.1.2 Protease A [Streptomyces grise ( 181) 71 21.5 1.5 0.277 0.605 71 119 38 149 1 274 77 181 1 181 7 14 0 d1epne_ 2.32.1.2.1 Endothiapepsin [chestnut bligh ( 330) 76 21.5 2.7 0.223 0.518 76 220 48 265 1 274 67 267 1 330 2 19 0 d1xsoa_ 2.1.7.1.3 Cu,Zn superoxide dismutase, SOD ( 150) 64 20.4 2.8 0.281 0.562 64 89 17 97 1 274 22 108 1 150 8 2 0 d2mcm__ 2.1.6.1.1 Macromycin [Streptomyces macrom ( 112) 59 19.8 3 0.250 0.598 59 112 40 138 1 274 2 109 1 112 13 4 0 d2eng__ 2.33.1.1.1 Endoglucanase V [Humicola inso ( 205) 68 20.7 3.1 0.256 0.610 68 82 126 204 1 274 50 124 1 205 3 7 0 d1cpq__ 1.20.3.2.5 Cytochrome c' [(Rhodobacter ca ( 129) 61 20.0 3.1 0.275 0.550 61 109 52 160 1 274 9 106 1 129 0 11 0 d1whi__ 2.23.1.1.1 Ribosomal protein L14 [Bacillu ( 122) 57 19.3 4.8 0.429 0.810 57 21 136 156 1 274 9 29 1 122 0 0 0 d1fus__ 4.1.1.1.2 RNase F1 [Fusarium moniliforme] ( 106) 54 18.9 5.4 0.297 0.649 54 37 126 160 1 274 69 105 1 106 2 0 0 d1ptf__ 4.48.1.1.2 Histidine-containing phosphoca ( 87) 50 18.4 6.3 0.286 0.714 50 28 60 87 1 274 54 81 1 87 0 0 0 d1bbo_1 7.30.1.1.8 (1-27) Enhancer binding protei ( 27) 29 16.0 10 0.231 0.769 29 13 234 246 1 274 9 21 1 27 0 0 0 >>>d1csee_, 274 aa vs testset.fa library 12>>>d1csei_ 4.21.1.1.1 Eglin C [leech (Hirudo medicinalis)] - 63 aa vs testset.fa library 13355 residues in 93 sequences Expectation_n fit: rho(ln(x))= 7.8456+/-0.0273; mu= -7.1289+/- 1.319 mean_var=23.3126+/- 5.964, 0's: 0 Z-trim: 1 B-trim: 9 in 1/18 Lambda= 0.265631 Smith-Waterman (PGopt) (4.2 Mar 2004) function [BL50 matrix (15:-5)], gap-penalty: -12/-2 Scan time: 0.010 The best scores are: s-w bits E(93) %_id %_sim sw alen an0 ax0 pn0 px0 an1 ax1 pn1 px1 gapq gapl fs d1csei_ 4.21.1.1.1 Eglin C [leech (Hirudo medicin ( 63) 435 169.8 2.9e-46 1.000 1.000 435 63 1 63 1 63 1 63 1 63 0 0 0 d1ezm_1 1.47.1.1.1 (154-298) Elastase [Pseudomona ( 145) 53 22.1 0.19 0.289 0.658 53 38 4 35 1 63 50 87 1 145 6 0 0 d1cbn__ 7.11.1.1.1 Crambin [abyssinian cabbage (C ( 46) 36 17.4 1.6 0.444 0.611 36 18 25 42 1 63 13 29 1 46 0 1 0 d1cyo__ 4.62.1.1.1 Cytochrome b5 [bovine (Bos tau ( 88) 41 18.3 1.6 0.310 0.552 41 29 5 32 1 63 10 38 1 88 1 0 0 d8tlne2 4.46.1.1.2 (1-155) Thermolysin [Bacillus ( 155) 44 18.5 2.4 0.293 0.561 44 41 19 58 1 63 103 142 1 155 1 1 0 d1bpi__ 7.6.1.1.1 Pancreatic trypsin inhibitor [b ( 58) 36 17.0 2.6 0.375 0.500 36 16 35 50 1 63 9 24 1 58 0 0 0 d1xnb__ 2.18.1.8.1 Xylanase II [Bacillus circulan ( 185) 44 18.2 3.4 0.283 0.543 44 46 10 55 1 63 117 160 1 185 0 2 0 e6rlx.2c1 7.1.1.1.4 Relaxin [human (Homo sapiens) ( 24) 27 14.9 4.4 0.364 0.727 27 11 53 63 1 63 4 14 1 24 0 0 0 d1aab__ 1.17.1.1.1 HMG1, fragments A and B [rat/h ( 83) 36 16.4 5.4 0.269 0.654 36 26 8 33 1 63 57 82 1 83 0 0 0 d2sn3__ 7.3.6.1.1 scorpion toxin [Centruroides sc ( 65) 33 15.7 7.1 0.667 1.000 33 6 30 35 1 63 51 56 1 65 0 0 0 e1ben.2d1 7.1.1.1.2 Insulin [human (Homo sapiens) ( 28) 26 14.3 7.8 0.750 1.000 26 4 48 51 1 63 25 28 1 28 0 0 0 d1burd2 4.31.9.1.2 (1-136) Ribulose 1,5-bisphosph ( 136) 38 16.4 8.6 0.320 0.480 38 25 28 52 1 63 13 36 1 136 0 1 0 d1rie__ 7.35.1.2.1 The rieske iron-sulfur protein ( 127) 37 16.1 9.7 0.381 0.619 37 21 9 27 1 63 35 55 1 127 2 0 0 >>>d1csei_, 63 aa vs testset.fa library 13>>>d1jbc__ 2.18.1.1.1 Concanavalin A [jack bean (Canavalia ensiformis)] - 237 aa vs testset.fa library 13355 residues in 93 sequences Expectation_n fit: rho(ln(x))= 9.7867+/-0.0517; mu= -7.7514+/- 2.455 mean_var=61.9080+/-15.905, 0's: 0 Z-trim: 1 B-trim: 0 in 0/18 Lambda= 0.163005 Smith-Waterman (PGopt) (4.2 Mar 2004) function [BL50 matrix (15:-5)], gap-penalty: -12/-2 Scan time: 0.030 The best scores are: s-w bits E(93) %_id %_sim sw alen an0 ax0 pn0 px0 an1 ax1 pn1 px1 gapq gapl fs d1jbc__ 2.18.1.1.1 Concanavalin A [jack bean (Can ( 237) 1539 367.8 1e-104 1.000 1.000 1539 237 1 237 1 237 1 237 1 237 0 0 0 d3pte__ 5.3.1.1.1 D-ala carboxypeptidase/transpep ( 347) 74 22.9 0.96 0.306 0.565 74 62 56 110 1 237 62 123 1 347 7 0 0 d1ezm_1 1.47.1.1.1 (154-298) Elastase [Pseudomona ( 145) 62 20.9 1.7 0.254 0.563 62 71 133 202 1 237 24 87 1 145 1 7 0 d1rgea_ 4.1.1.1.1 RNase Sa [Streptomyces aureofac ( 96) 55 19.6 2.7 0.410 0.590 55 39 192 227 1 237 14 50 1 96 3 2 0 d2cba__ 2.47.1.1.2 Carbonic anhydrase [human (Hom ( 258) 64 20.8 3 0.232 0.512 64 125 91 210 1 237 29 143 1 258 5 10 0 d1pfsa_ 2.24.6.1.2 Gene V protein [Pseudomonas ph ( 78) 52 19.0 3.2 0.361 0.556 52 36 190 225 1 237 23 52 1 78 0 6 0 d2sga__ 2.29.1.1.2 Protease A [Streptomyces grise ( 181) 60 20.2 3.3 0.215 0.508 60 130 103 227 1 237 35 156 1 181 5 8 0 d1ckaa_ 2.20.2.1.1 C-Crk, N-terminal SH3 domain [ ( 57) 48 18.4 3.7 0.333 0.533 48 30 28 54 1 237 24 53 1 57 3 0 0 d1cus__ 3.13.7.1.1 Cutinase [fungus (Fusarium sol ( 197) 58 19.6 5.1 0.333 0.667 58 33 209 237 1 237 58 90 1 197 4 0 0 d2eng__ 2.33.1.1.1 Endoglucanase V [Humicola inso ( 205) 57 19.4 6.4 0.270 0.510 57 100 145 234 1 237 42 132 1 205 10 9 0 d1amm_2 2.9.1.1.1 (86-174) gamma-Crystallin [bovi ( 89) 48 18.0 7.3 0.267 0.567 48 30 20 49 1 237 52 81 1 89 0 0 0 d1rcf__ 3.13.4.1.3 Flavodoxin [Anabaena 7120] ( 169) 54 18.8 7.6 0.292 0.584 54 89 34 115 1 237 1 82 1 169 7 7 0 >>>d1jbc__, 237 aa vs testset.fa library 14>>>d1hms__ 2.39.1.2.1 Muscle fatty acid binding protein (m-fabp) [human (Homo sapiens)] - 131 aa vs testset.fa library 13355 residues in 93 sequences Expectation_n fit: rho(ln(x))= 7.2177+/-0.0472; mu= 0.4442+/- 2.290 mean_var=40.8305+/-12.223, 0's: 0 Z-trim: 2 B-trim: 0 in 0/19 Lambda= 0.200716 Smith-Waterman (PGopt) (4.2 Mar 2004) function [BL50 matrix (15:-5)], gap-penalty: -12/-2 Scan time: 0.020 The best scores are: s-w bits E(93) %_id %_sim sw alen an0 ax0 pn0 px0 an1 ax1 pn1 px1 gapq gapl fs d1hms__ 2.39.1.2.1 Muscle fatty acid binding prot ( 131) 836 246.7 8.9e-69 1.000 1.000 836 131 1 131 1 131 1 131 1 131 0 0 0 d1ifc__ 2.39.1.2.2 Intestinal fatty acid binding ( 131) 253 77.8 5.9e-18 0.321 0.679 253 131 3 131 1 131 1 131 1 131 2 0 0 d1lkka_ 4.47.1.1.1 p56-lck tyrosine kinase [human ( 105) 55 20.7 0.78 0.349 0.674 55 43 53 89 1 131 26 68 1 105 6 0 0 d5p21__ 3.24.1.3.1 cH-p21 Ras protein [human (Hom ( 166) 56 20.6 1.2 0.205 0.551 56 78 2 79 1 131 76 150 1 166 0 3 0 d1rcf__ 3.13.4.1.3 Flavodoxin [Anabaena 7120] ( 169) 54 20.1 1.9 0.290 0.581 54 31 84 114 1 131 109 139 1 169 0 0 0 d2cba__ 2.47.1.1.2 Carbonic anhydrase [human (Hom ( 258) 53 19.5 4.2 0.350 0.675 53 40 66 100 1 131 64 101 1 258 5 2 0 d8rxna_ 7.34.3.1.1 Rubredoxin [Desulfovibrio vulg ( 52) 41 17.1 4.5 0.364 0.636 41 22 67 87 1 131 10 31 1 52 1 0 0 d1pls__ 2.35.1.1.5 Pleckstrin, N-terminal domain ( 113) 46 18.0 5.1 0.320 0.640 46 25 67 91 1 131 32 55 1 113 0 1 0 d8tlne2 4.46.1.1.2 (1-155) Thermolysin [Bacillus ( 155) 46 17.8 8 0.333 0.593 46 27 97 123 1 131 115 139 1 155 0 2 0 d1igd__ 4.11.1.1.1 Immunoglobulin-binding protein ( 61) 39 16.4 8.4 0.357 0.571 39 28 103 130 1 131 6 33 1 61 0 0 0 d1tpg_1 7.10.1.1.13 (51-91) Plasminogen activator ( 41) 36 15.8 8.6 0.292 0.583 36 24 16 39 1 131 18 41 1 41 0 0 0 >>>d1hms__, 131 aa vs testset.fa library 15>>>d7rsa__ 4.4.1.1.1 Ribonuclease A (also ribonuclease B, S) [bovine (Bos taurus)] - 124 aa vs testset.fa library 13355 residues in 93 sequences Expectation_n fit: rho(ln(x))= 4.3765+/-0.0433; mu= 15.1441+/- 2.201 mean_var=54.1475+/-14.359, 0's: 0 Z-trim: 2 B-trim: 0 in 0/19 Lambda= 0.174295 Smith-Waterman (PGopt) (4.2 Mar 2004) function [BL50 matrix (15:-5)], gap-penalty: -12/-2 Scan time: 0.020 The best scores are: s-w bits E(93) %_id %_sim sw alen an0 ax0 pn0 px0 an1 ax1 pn1 px1 gapq gapl fs d7rsa__ 4.4.1.1.1 Ribonuclease A (also ribonuclea ( 124) 840 216.9 7.5e-60 1.000 1.000 840 124 1 124 1 124 1 124 1 124 0 0 0 d1poa__ 1.80.1.2.1 Snake phospholipase A2 [taiwan ( 118) 80 25.7 0.024 0.226 0.604 80 53 58 110 1 124 71 118 1 118 0 5 0 d1xyzb_ 3.1.1.3.1 Xylanase XynZ (family F) [Clost ( 320) 61 21.3 1.4 0.242 0.560 61 91 30 114 1 124 193 272 1 320 6 11 0 d3ebx__ 7.5.1.1.1 Erabutoxin B (also neurotoxin B ( 62) 53 18.7 1.6 0.218 0.582 53 55 26 75 1 124 3 57 1 62 5 0 0 d1tpg_1 7.10.1.1.13 (51-91) Plasminogen activator ( 41) 49 17.6 2.4 0.326 0.512 49 43 58 99 1 124 1 38 1 41 1 5 0 d1aab__ 1.17.1.1.1 HMG1, fragments A and B [rat/h ( 83) 52 18.6 2.4 0.225 0.675 52 40 2 41 1 124 20 58 1 83 0 1 0 d2erl__ 1.10.1.1.1 ER-1 [Euplotes raikovi] ( 40) 46 16.8 3.9 0.375 0.583 46 24 52 73 1 124 6 29 1 40 2 0 0 d1krn__ 7.12.1.1.1 Plasminogen kringle 4 [human ( ( 79) 46 17.0 6.5 0.263 0.579 46 38 65 101 1 124 2 39 1 79 1 0 0 d193l__ 4.2.1.2.1 Lysozyme [chicken (Gallus gallu ( 129) 47 17.5 7.9 0.295 0.526 47 78 5 68 1 124 31 104 1 129 14 4 0 d2eng__ 2.33.1.1.1 Endoglucanase V [Humicola inso ( 205) 49 18.1 7.9 0.233 0.567 49 30 93 122 1 124 14 43 1 205 0 0 0 d1lit__ 4.88.1.1.1 Lithostathine, inhibitor of st ( 131) 47 17.5 8 0.292 0.479 47 48 65 112 1 124 1 46 1 131 0 2 0 >>>d7rsa__, 124 aa vs testset.fa library 16>>>d2sn3__ 7.3.6.1.1 scorpion toxin [Centruroides sculpturatus ewing, variant 3] - 65 aa vs testset.fa library 13355 residues in 93 sequences Expectation_n fit: rho(ln(x))= 2.5987+/-0.0426; mu= 19.6281+/- 2.089 mean_var=53.8270+/-16.497, 0's: 0 Z-trim: 2 B-trim: 2 in 1/18 Lambda= 0.174813 Smith-Waterman (PGopt) (4.2 Mar 2004) function [BL50 matrix (15:-5)], gap-penalty: -12/-2 Scan time: 0.010 The best scores are: s-w bits E(93) %_id %_sim sw alen an0 ax0 pn0 px0 an1 ax1 pn1 px1 gapq gapl fs d2sn3__ 7.3.6.1.1 scorpion toxin [Centruroides sc ( 65) 495 130.0 2.8e-34 1.000 1.000 495 65 1 65 1 65 1 65 1 65 0 0 0 d1ptx__ 7.3.6.1.4 scorpion toxin [Androctonus aus ( 64) 124 36.5 4.1e-06 0.403 0.581 124 62 1 57 1 65 2 57 1 64 5 6 0 d2erl__ 1.10.1.1.1 ER-1 [Euplotes raikovi] ( 40) 58 19.4 0.34 0.257 0.686 58 35 10 43 1 65 1 34 1 40 1 1 0 d1isua_ 7.29.1.1.1 HIPIP (high potential iron pro ( 62) 56 19.3 0.59 0.326 0.512 56 43 7 44 1 65 17 58 1 62 5 1 0 d1arb__ 2.29.1.1.1 Achromobacter protease [Achrom ( 263) 59 21.2 0.67 0.312 0.562 59 32 19 50 1 65 206 237 1 263 0 0 0 d4ptp__ 2.29.1.2.1 Trypsin(ogen) [bovine (Bos tau ( 223) 51 19.0 2.5 0.250 0.442 51 52 3 47 1 65 164 215 1 223 7 0 0 d1pls__ 2.35.1.1.5 Pleckstrin, N-terminal domain ( 113) 47 17.5 3.7 0.875 1.000 47 8 1 8 1 65 7 14 1 113 0 0 0 d1amm_1 2.9.1.1.1 (1-85) gamma-Crystallin [bovine ( 85) 44 16.5 5.4 0.375 0.562 44 16 36 51 1 65 10 25 1 85 0 0 0 e6rlx.2c1 7.1.1.1.4 Relaxin [human (Homo sapiens) ( 24) 40 14.5 6.1 0.357 0.571 40 14 12 25 1 65 11 24 1 24 0 0 0 d1poa__ 1.80.1.2.1 Snake phospholipase A2 [taiwan ( 118) 43 16.5 7.4 0.389 0.667 43 18 34 51 1 65 79 95 1 118 0 1 0 d2sga__ 2.29.1.1.2 Protease A [Streptomyces grise ( 181) 44 17.1 7.5 0.271 0.500 44 48 3 50 1 65 90 135 1 181 0 2 0 d1rie__ 7.35.1.2.1 The rieske iron-sulfur protein ( 127) 43 16.6 7.6 0.368 0.526 43 19 24 42 1 65 74 92 1 127 0 0 0 d1utg__ 1.60.1.1.1 Uteroglobin [Rabbit (Oryctolag ( 70) 41 15.6 8.2 0.421 0.579 41 19 39 57 1 65 1 19 1 70 0 0 0 d1fus__ 4.1.1.1.2 RNase F1 [Fusarium moniliforme] ( 106) 42 16.2 8.3 0.240 0.540 42 50 17 64 1 65 16 63 1 106 2 2 0 d1tpg_1 7.10.1.1.13 (51-91) Plasminogen activator ( 41) 39 14.7 9.1 0.346 0.500 39 26 40 65 1 65 17 34 1 41 0 8 0 d1lit__ 4.88.1.1.1 Lithostathine, inhibitor of st ( 131) 42 16.3 9.1 0.300 0.433 42 30 30 58 1 65 72 101 1 131 1 0 0 d2eng__ 2.33.1.1.1 Endoglucanase V [Humicola inso ( 205) 43 16.9 9.3 0.241 0.517 43 29 31 58 1 65 1 29 1 205 1 0 0 >>>d2sn3__, 65 aa vs testset.fa library 17>>>d1ifc__ 2.39.1.2.2 Intestinal fatty acid binding protein [rat (Rattus rattus)] - 131 aa vs testset.fa library 13355 residues in 93 sequences Expectation_n fit: rho(ln(x))= 14.8304+/-0.0272; mu= -33.6391+/- 1.257 mean_var=76.1984+/-23.253, 0's: 0 Z-trim: 2 B-trim: 0 in 0/19 Lambda= 0.146927 Smith-Waterman (PGopt) (4.2 Mar 2004) function [BL50 matrix (15:-5)], gap-penalty: -12/-2 Scan time: 0.010 The best scores are: s-w bits E(93) %_id %_sim sw alen an0 ax0 pn0 px0 an1 ax1 pn1 px1 gapq gapl fs d1ifc__ 2.39.1.2.2 Intestinal fatty acid binding ( 131) 844 185.6 2.1e-50 1.000 1.000 844 131 1 131 1 131 1 131 1 131 0 0 0 d1hms__ 2.39.1.2.1 Muscle fatty acid binding prot ( 131) 253 60.3 1.1e-12 0.321 0.679 253 131 1 131 1 131 3 131 1 131 0 2 0 d3sdhb_ 1.1.1.1.1 Hemoglobin I [ark clam (Scaphar ( 145) 64 20.1 1.6 0.234 0.596 64 47 74 120 1 131 31 77 1 145 0 0 0 d1bpi__ 7.6.1.1.1 Pancreatic trypsin inhibitor [b ( 58) 49 18.5 1.9 0.571 0.786 49 14 113 126 1 131 29 42 1 58 0 0 0 e6rlx.2d1 7.1.1.1.4 Relaxin [human (Homo sapiens) ( 25) 34 16.7 2.8 0.417 0.583 34 12 81 92 1 131 1 12 1 25 0 0 0 d1ptf__ 4.48.1.1.2 Histidine-containing phosphoca ( 87) 50 18.0 4 0.227 0.636 50 66 18 81 1 131 1 64 1 87 2 2 0 d1pls__ 2.35.1.1.5 Pleckstrin, N-terminal domain ( 113) 52 18.0 5.2 0.246 0.594 52 69 42 106 1 131 7 70 1 113 4 5 0 >>>d1ifc__, 131 aa vs testset.fa library 18>>>d1ptx__ 7.3.6.1.4 scorpion toxin [Androctonus australius hector, toxin II] - 64 aa vs testset.fa library 13355 residues in 93 sequences Expectation_n fit: rho(ln(x))= 1.9648+/-0.0186; mu= 22.4573+/- 0.787 mean_var=41.7970+/-11.623, 0's: 0 Z-trim: 2 B-trim: 0 in 0/19 Lambda= 0.198382 Smith-Waterman (PGopt) (4.2 Mar 2004) function [BL50 matrix (15:-5)], gap-penalty: -12/-2 Scan time: 0.010 The best scores are: s-w bits E(93) %_id %_sim sw alen an0 ax0 pn0 px0 an1 ax1 pn1 px1 gapq gapl fs d1ptx__ 7.3.6.1.4 scorpion toxin [Androctonus aus ( 64) 500 147.2 1.9e-39 1.000 1.000 500 64 1 64 1 64 1 64 1 64 0 0 0 d2sn3__ 7.3.6.1.1 scorpion toxin [Centruroides sc ( 65) 124 39.6 4.7e-07 0.403 0.581 124 62 2 57 1 64 1 57 1 65 6 5 0 d1amm_1 2.9.1.1.1 (1-85) gamma-Crystallin [bovine ( 85) 54 19.8 0.57 0.234 0.489 54 47 9 54 1 64 38 84 1 85 1 0 0 d1poa__ 1.80.1.2.1 Snake phospholipase A2 [taiwan ( 118) 50 18.9 1.4 0.350 0.500 50 40 4 42 1 64 34 63 1 118 1 10 0 d1tpg_1 7.10.1.1.13 (51-91) Plasminogen activator ( 41) 45 16.6 2.5 0.345 0.621 45 29 22 48 1 64 1 25 1 41 2 4 0 d4ptp__ 2.29.1.2.1 Trypsin(ogen) [bovine (Bos tau ( 223) 47 18.6 3.2 0.268 0.500 47 56 4 58 1 64 154 208 1 223 1 1 0 d2cba__ 2.47.1.1.2 Carbonic anhydrase [human (Hom ( 258) 47 18.7 3.4 0.250 0.469 47 32 28 59 1 64 111 142 1 258 0 0 0 d193l__ 4.2.1.2.1 Lysozyme [chicken (Gallus gallu ( 129) 45 17.6 3.9 0.258 0.452 45 31 5 29 1 64 53 83 1 129 6 0 0 d2eng__ 2.33.1.1.1 Endoglucanase V [Humicola inso ( 205) 45 18.0 4.6 0.444 0.611 45 18 43 60 1 64 84 98 1 205 0 3 0 d1lit__ 4.88.1.1.1 Lithostathine, inhibitor of st ( 131) 44 17.3 4.7 0.308 0.769 44 13 26 38 1 64 102 114 1 131 0 0 0 d1isua_ 7.29.1.1.1 HIPIP (high potential iron pro ( 62) 42 16.1 5.3 0.278 0.444 42 36 28 63 1 64 21 55 1 62 0 1 0 e6rlx.2c1 7.1.1.1.4 Relaxin [human (Homo sapiens) ( 24) 38 14.1 7.9 0.333 0.611 38 18 19 36 1 64 8 24 1 24 0 1 0 d2erl__ 1.10.1.1.1 ER-1 [Euplotes raikovi] ( 40) 39 14.8 7.9 0.324 0.588 39 34 16 49 1 64 10 39 1 40 0 4 0 d2olba_ 3.68.1.1.1 Oligo-peptide binding protein ( 517) 44 18.5 7.9 0.538 0.769 44 13 23 35 1 64 341 353 1 517 0 0 0 d8rxna_ 7.34.3.1.1 Rubredoxin [Desulfovibrio vulg ( 52) 39 15.0 8.7 0.375 0.500 39 16 1 16 1 64 24 39 1 52 0 0 0 e1ben.2c1 7.1.1.1.2 Insulin [human (Homo sapiens) ( 21) 37 13.7 9.1 0.400 0.600 37 15 12 23 1 64 7 21 1 21 3 0 0 d1epne_ 2.32.1.2.1 Endothiapepsin [chestnut bligh ( 330) 42 17.5 9.8 0.321 0.500 42 28 17 44 1 64 55 81 1 330 0 1 0 >>>d1ptx__, 64 aa vs testset.fa library 19>>>d3sdhb_ 1.1.1.1.1 Hemoglobin I [ark clam (Scapharca inaequivalvis)] - 145 aa vs testset.fa library 13355 residues in 93 sequences Expectation_n fit: rho(ln(x))= 9.5459+/-0.0148; mu= -9.4798+/- 0.616 mean_var=45.9478+/-18.806, 0's: 0 Z-trim: 3 B-trim: 0 in 0/19 Lambda= 0.189209 Smith-Waterman (PGopt) (4.2 Mar 2004) function [BL50 matrix (15:-5)], gap-penalty: -12/-2 Scan time: 0.010 The best scores are: s-w bits E(93) %_id %_sim sw alen an0 ax0 pn0 px0 an1 ax1 pn1 px1 gapq gapl fs d3sdhb_ 1.1.1.1.1 Hemoglobin I [ark clam (Scaphar ( 145) 933 259.5 1.5e-72 1.000 1.000 933 145 1 145 1 145 1 145 1 145 0 0 0 d1bvc__ 1.1.1.1.4 Myoglobin [sperm whale (Physete ( 153) 121 37.8 8.7e-06 0.256 0.562 121 121 21 137 1 145 14 131 1 153 4 3 0 d1flp__ 1.1.1.1.2 Hemoglobin I [clam (Lucina pect ( 142) 116 36.5 2e-05 0.232 0.641 116 142 9 145 1 145 2 138 1 142 5 5 0 d1ifc__ 2.39.1.2.2 Intestinal fatty acid binding ( 131) 64 22.4 0.32 0.234 0.596 64 47 31 77 1 145 74 120 1 131 0 0 0 d1eco__ 1.1.1.1.13 Erythrocruorin [Midge (Chirono ( 136) 58 20.7 1.1 0.188 0.580 58 112 27 134 1 145 14 121 1 136 4 4 0 e1ben.2c1 7.1.1.1.2 Insulin [human (Homo sapiens) ( 21) 34 16.3 3.4 0.455 0.727 34 11 69 79 1 145 9 19 1 21 0 0 0 d1aab__ 1.17.1.1.1 HMG1, fragments A and B [rat/h ( 83) 47 18.3 3.4 0.259 0.741 47 27 4 30 1 145 32 57 1 83 0 1 0 d2mcm__ 2.1.6.1.1 Macromycin [Streptomyces macrom ( 112) 48 18.2 4.8 0.400 0.880 48 25 4 27 1 145 57 79 1 112 1 2 0 d1lkka_ 4.47.1.1.1 p56-lck tyrosine kinase [human ( 105) 47 18.0 5.2 0.247 0.584 47 89 4 91 1 145 15 96 1 105 1 7 0 d2mhr__ 1.20.4.1.4 Myohemerythin [sipunculan worm ( 118) 48 18.2 5.3 0.286 0.653 48 49 84 129 1 145 38 83 1 118 3 3 0 d2hbg__ 1.1.1.1.3 Glycera globin [marine bloodwor ( 147) 50 18.4 5.4 0.218 0.545 50 55 9 61 1 145 2 56 1 147 2 0 0 d3pte__ 5.3.1.1.1 D-ala carboxypeptidase/transpep ( 347) 58 19.6 5.6 0.480 0.600 58 25 56 80 1 145 165 187 1 347 0 2 0 d8rxna_ 7.34.3.1.1 Rubredoxin [Desulfovibrio vulg ( 52) 38 16.4 7.9 0.600 0.600 38 10 84 93 1 145 32 41 1 52 0 0 0 d1whi__ 2.23.1.1.1 Ribosomal protein L14 [Bacillu ( 122) 45 17.3 9.7 0.353 0.618 45 34 114 144 1 145 13 46 1 122 3 0 0 >>>d3sdhb_, 145 aa vs testset.fa library 20>>>d1aac__ 2.5.1.1.1 Amicyanin [Paracoccus denitrificans] - 105 aa vs testset.fa library 13355 residues in 93 sequences Expectation_n fit: rho(ln(x))= 6.1827+/-0.0359; mu= 2.5332+/- 1.711 mean_var=32.8707+/-10.781, 0's: 0 Z-trim: 2 B-trim: 0 in 0/18 Lambda= 0.223702 Smith-Waterman (PGopt) (4.2 Mar 2004) function [BL50 matrix (15:-5)], gap-penalty: -12/-2 Scan time: 0.020 The best scores are: s-w bits E(93) %_id %_sim sw alen an0 ax0 pn0 px0 an1 ax1 pn1 px1 gapq gapl fs d1aac__ 2.5.1.1.1 Amicyanin [Paracoccus denitrifi ( 105) 700 230.1 5.7e-64 1.000 1.000 700 105 1 105 1 105 1 105 1 105 0 0 0 d1plc__ 2.5.1.1.2 Plastocyanin [poplar (Populus n ( 99) 109 39.4 1.4e-06 0.242 0.582 109 91 24 104 1 105 8 98 1 99 10 0 0 d1whi__ 2.23.1.1.1 Ribosomal protein L14 [Bacillu ( 122) 53 21.2 0.5 0.275 0.627 53 51 5 55 1 105 2 51 1 122 0 1 0 d1rgea_ 4.1.1.1.1 RNase Sa [Streptomyces aureofac ( 96) 48 19.7 1.1 0.250 0.482 48 56 41 95 1 105 33 85 1 96 1 3 0 d1ezm_2 4.46.1.1.1 (1-153) Elastase [Pseudomonas ( 153) 50 20.1 1.3 0.283 0.509 50 53 15 62 1 105 31 83 1 153 5 0 0 d8tlne2 4.46.1.1.2 (1-155) Thermolysin [Bacillus ( 155) 48 19.4 2.1 0.273 0.545 48 44 18 61 1 105 37 79 1 155 0 1 0 d2prk__ 3.26.1.1.6 Proteinase K [fungus (Tritirac ( 279) 50 19.8 3 0.226 0.538 50 93 3 90 1 105 15 104 1 279 5 3 0 d1eco__ 1.1.1.1.13 Erythrocruorin [Midge (Chirono ( 136) 45 18.5 3.4 0.226 0.548 45 84 1 82 1 105 45 125 1 136 2 3 0 d4ptp__ 2.29.1.2.1 Trypsin(ogen) [bovine (Bos tau ( 223) 47 18.9 4.3 0.208 0.542 47 48 1 48 1 105 171 218 1 223 0 0 0 d1mla_1 3.12.1.1.1 (1-125,196-305) Catalytic doma ( 236) 47 18.9 4.7 0.237 0.605 47 38 2 37 1 105 120 157 1 236 2 0 0 d4lzm__ 4.2.1.3.1 Phage T4 lysozyme [Escherichia ( 162) 43 17.8 6.7 0.250 0.544 43 68 39 104 1 105 87 150 1 162 2 4 0 d2olba_ 3.68.1.1.1 Oligo-peptide binding protein ( 517) 50 19.4 7 0.289 0.644 50 45 13 57 1 105 351 392 1 517 0 3 0 d1epne_ 2.32.1.2.1 Endothiapepsin [chestnut bligh ( 330) 47 18.7 7.3 0.222 0.519 47 81 9 89 1 105 46 123 1 330 0 3 0 d1isua_ 7.29.1.1.1 HIPIP (high potential iron pro ( 62) 36 16.1 8.4 0.556 0.778 36 9 5 13 1 105 29 37 1 62 0 0 0 d1ptx__ 7.3.6.1.4 scorpion toxin [Androctonus aus ( 64) 36 16.0 8.8 0.600 0.700 36 10 16 25 1 105 1 10 1 64 0 0 0 d1lit__ 4.88.1.1.1 Lithostathine, inhibitor of st ( 131) 40 16.9 9.6 0.212 0.538 40 52 41 91 1 105 18 62 1 131 1 7 0 >>>d1aac__, 105 aa vs testset.fa library 21>>>d256bb_ 1.20.3.1.1 Cytochrome b562 [Escherichia coli] - 106 aa vs testset.fa library 13355 residues in 93 sequences Expectation_n fit: rho(ln(x))= 5.5511+/-0.0312; mu= 5.1418+/- 1.499 mean_var=31.5876+/-10.079, 0's: 0 Z-trim: 1 B-trim: 0 in 0/19 Lambda= 0.228200 Smith-Waterman (PGopt) (4.2 Mar 2004) function [BL50 matrix (15:-5)], gap-penalty: -12/-2 Scan time: 0.020 The best scores are: s-w bits E(93) %_id %_sim sw alen an0 ax0 pn0 px0 an1 ax1 pn1 px1 gapq gapl fs d256bb_ 1.20.3.1.1 Cytochrome b562 [Escherichia c ( 106) 676 226.6 6.3e-63 1.000 1.000 676 106 1 106 1 106 1 106 1 106 0 0 0 d2olba_ 3.68.1.1.1 Oligo-peptide binding protein ( 517) 65 24.9 0.17 0.348 0.674 65 46 48 93 1 106 431 471 1 517 0 5 0 d1cpq__ 1.20.3.2.5 Cytochrome c' [(Rhodobacter ca ( 129) 53 21.4 0.45 0.274 0.435 53 62 45 106 1 106 65 126 1 129 0 0 0 d4xis__ 3.1.11.1.4 D-xylose isomerase [streptomyc ( 386) 51 20.4 2.8 0.288 0.576 51 59 19 76 1 106 143 199 1 386 1 2 0 d1hfc__ 4.46.1.5.1 Fibroblast collagenase [human ( 157) 46 19.1 2.8 0.279 0.605 46 43 47 89 1 106 11 51 1 157 0 2 0 d1flp__ 1.1.1.1.2 Hemoglobin I [clam (Lucina pect ( 142) 44 18.4 3.8 0.353 0.588 44 34 54 85 1 106 57 90 1 142 2 0 0 d1jbc__ 2.18.1.1.1 Concanavalin A [jack bean (Can ( 237) 46 18.9 4.6 0.265 0.647 46 34 51 84 1 106 200 229 1 237 0 4 0 d2phy__ 4.57.2.1.1 Photoactive yellow protein [Ec ( 125) 42 17.8 5.1 0.243 0.527 42 74 2 64 1 106 10 82 1 125 11 1 0 d1lam_1 3.33.1.1.1 (1-159) Leucine aminopeptidase ( 159) 43 18.1 5.5 0.250 0.688 43 32 49 79 1 106 11 42 1 159 1 0 0 d2mhr__ 1.20.4.1.4 Myohemerythin [sipunculan worm ( 118) 41 17.5 5.9 0.236 0.491 41 55 21 73 1 106 38 92 1 118 2 0 0 d1rro__ 1.31.1.4.1 Oncomodulin [rat (Rattus norve ( 108) 40 17.2 6.7 0.204 0.612 40 49 38 83 1 106 6 54 1 108 3 0 0 d1mnta_ 1.32.1.1.2 Mnt repressor [Salmonella bact ( 66) 37 16.4 7.1 0.429 0.786 37 14 68 81 1 106 48 61 1 66 0 0 0 d1eco__ 1.1.1.1.13 Erythrocruorin [Midge (Chirono ( 136) 41 17.5 7.1 0.303 0.667 41 33 14 46 1 106 24 54 1 136 0 2 0 d1utg__ 1.60.1.1.1 Uteroglobin [Rabbit (Oryctolag ( 70) 37 16.4 7.6 0.333 0.521 37 48 13 56 1 106 24 67 1 70 4 4 0 d1xsoa_ 2.1.7.1.3 Cu,Zn superoxide dismutase, SOD ( 150) 41 17.4 8 0.412 0.647 41 17 66 82 1 106 122 138 1 150 0 0 0 d1amm_2 2.9.1.1.1 (86-174) gamma-Crystallin [bovi ( 89) 38 16.7 8.1 0.241 0.621 38 29 47 70 1 106 16 44 1 89 5 0 0 >>>d256bb_, 106 aa vs testset.fa library 22>>>d1plc__ 2.5.1.1.2 Plastocyanin [poplar (Populus nigra variant italica)] - 99 aa vs testset.fa library 13355 residues in 93 sequences Expectation_n fit: rho(ln(x))= 7.0280+/-0.0276; mu= 0.7782+/- 1.266 mean_var=33.2037+/- 9.619, 0's: 0 Z-trim: 2 B-trim: 3 in 1/17 Lambda= 0.222578 Smith-Waterman (PGopt) (4.2 Mar 2004) function [BL50 matrix (15:-5)], gap-penalty: -12/-2 Scan time: 0.020 The best scores are: s-w bits E(93) %_id %_sim sw alen an0 ax0 pn0 px0 an1 ax1 pn1 px1 gapq gapl fs d1plc__ 2.5.1.1.2 Plastocyanin [poplar (Populus n ( 99) 648 211.6 1.9e-58 1.000 1.000 648 99 1 99 1 99 1 99 1 99 0 0 0 d1aac__ 2.5.1.1.1 Amicyanin [Paracoccus denitrifi ( 105) 109 38.4 2.6e-06 0.242 0.582 109 91 8 98 1 99 24 104 1 105 0 10 0 d2eng__ 2.33.1.1.1 Endoglucanase V [Humicola inso ( 205) 57 21.2 0.79 0.273 0.489 57 88 22 97 1 99 22 109 1 205 12 0 0 d1lkka_ 4.47.1.1.1 p56-lck tyrosine kinase [human ( 105) 51 19.8 1.1 0.306 0.667 51 36 52 86 1 99 39 74 1 105 1 0 0 d4xis__ 3.1.11.1.4 D-xylose isomerase [streptomyc ( 386) 58 21.0 1.7 0.311 0.600 58 45 2 39 1 99 189 231 1 386 7 2 0 d193l__ 4.2.1.2.1 Lysozyme [chicken (Gallus gallu ( 129) 47 18.3 3.5 0.217 0.600 47 60 6 65 1 99 49 107 1 129 0 1 0 d3ebx__ 7.5.1.1.1 Erabutoxin B (also neurotoxin B ( 62) 41 17.0 4.2 0.273 0.545 41 44 22 64 1 99 18 61 1 62 1 0 0 d1isua_ 7.29.1.1.1 HIPIP (high potential iron pro ( 62) 40 16.7 5.2 0.333 0.733 40 15 10 24 1 99 38 52 1 62 0 0 0 d1rie__ 7.35.1.2.1 The rieske iron-sulfur protein ( 127) 45 17.7 5.3 0.353 0.706 45 17 72 87 1 99 76 92 1 127 1 0 0 e1ben.2d1 7.1.1.1.2 Insulin [human (Homo sapiens) ( 28) 34 15.4 5.7 0.444 0.778 34 9 78 86 1 99 20 28 1 28 0 0 0 d2mhr__ 1.20.4.1.4 Myohemerythin [sipunculan worm ( 118) 44 17.5 5.8 0.391 0.739 44 23 50 71 1 99 91 113 1 118 1 0 0 d1ycc__ 1.3.1.1.4 Mitochondrial cytochrome c [bak ( 108) 43 17.2 6.3 0.239 0.609 43 46 21 66 1 99 33 77 1 108 0 1 0 d1cpq__ 1.20.3.2.5 Cytochrome c' [(Rhodobacter ca ( 129) 44 17.4 6.7 0.230 0.554 44 74 25 91 1 99 44 115 1 129 7 2 0 d1lit__ 4.88.1.1.1 Lithostathine, inhibitor of st ( 131) 44 17.4 6.8 0.350 0.700 44 20 16 35 1 99 94 111 1 131 0 2 0 d1ckaa_ 2.20.2.1.1 C-Crk, N-terminal SH3 domain [ ( 57) 38 16.1 7.1 0.275 0.600 38 40 59 98 1 99 15 51 1 57 0 3 0 d1mnta_ 1.32.1.1.2 Mnt repressor [Salmonella bact ( 66) 39 16.3 7.1 0.309 0.471 39 68 8 63 1 99 3 66 1 66 12 4 0 d1mla_2 4.31.18.1.1 (126-195) Probable ACP-bindin ( 70) 38 16.0 9.6 0.500 0.900 38 10 4 13 1 99 8 17 1 70 0 0 0 >>>d1plc__, 99 aa vs testset.fa library 23>>>d1amm_1 2.9.1.1.1 (1-85) gamma-Crystallin [bovine (Bos taurus) isoform II (B)] - 85 aa vs testset.fa library 13355 residues in 93 sequences Expectation_n fit: rho(ln(x))= -2.4987+/-0.0228; mu= 46.6892+/- 0.998 mean_var=58.5007+/-15.993, 0's: 0 Z-trim: 2 B-trim: 0 in 0/19 Lambda= 0.167685 Smith-Waterman (PGopt) (4.2 Mar 2004) function [BL50 matrix (15:-5)], gap-penalty: -12/-2 Scan time: 0.010 The best scores are: s-w bits E(93) %_id %_sim sw alen an0 ax0 pn0 px0 an1 ax1 pn1 px1 gapq gapl fs d1amm_1 2.9.1.1.1 (1-85) gamma-Crystallin [bovine ( 85) 657 164.0 2.9e-44 1.000 1.000 657 85 1 85 1 85 1 85 1 85 0 0 0 d1amm_2 2.9.1.1.1 (86-174) gamma-Crystallin [bovi ( 89) 218 57.9 2.7e-12 0.390 0.683 218 82 2 81 1 85 4 85 1 89 2 0 0 d1poa__ 1.80.1.2.1 Snake phospholipase A2 [taiwan ( 118) 54 18.8 2.1 0.260 0.500 54 50 6 54 1 85 27 73 1 118 1 3 0 d1ptx__ 7.3.6.1.4 scorpion toxin [Androctonus aus ( 64) 54 17.5 2.6 0.234 0.489 54 47 38 84 1 85 9 54 1 64 0 1 0 d3ebx__ 7.5.1.1.1 Erabutoxin B (also neurotoxin B ( 62) 52 17.0 3.7 0.346 0.615 52 26 11 34 1 85 32 57 1 62 2 0 0 d1lit__ 4.88.1.1.1 Lithostathine, inhibitor of st ( 131) 50 18.0 3.8 0.200 0.453 50 75 22 79 1 85 1 75 1 131 17 0 0 d2olba_ 3.68.1.1.1 Oligo-peptide binding protein ( 517) 46 19.9 4.2 0.205 0.500 46 44 34 77 1 85 389 432 1 517 0 0 0 d1xnb__ 2.18.1.8.1 Xylanase II [Bacillus circulan ( 185) 47 18.0 5.4 0.196 0.510 47 51 26 76 1 85 89 136 1 185 0 3 0 d1ckaa_ 2.20.2.1.1 C-Crk, N-terminal SH3 domain [ ( 57) 48 15.8 7.4 0.385 0.615 48 26 57 82 1 85 26 50 1 57 0 1 0 d1krn__ 7.12.1.1.1 Plasminogen kringle 4 [human ( ( 79) 47 16.3 7.6 0.259 0.519 47 27 23 49 1 85 42 68 1 79 0 0 0 d2eng__ 2.33.1.1.1 Endoglucanase V [Humicola inso ( 205) 44 17.5 8.4 0.391 0.522 44 23 18 34 1 85 12 33 1 205 6 1 0 d2prk__ 3.26.1.1.6 Proteinase K [fungus (Tritirac ( 279) 43 17.9 8.7 0.333 0.611 43 18 2 19 1 85 57 74 1 279 0 0 0 d1ycc__ 1.3.1.1.4 Mitochondrial cytochrome c [bak ( 108) 45 16.4 9.3 0.323 0.581 45 31 4 31 1 85 13 43 1 108 3 0 0 >>>d1amm_1, 85 aa vs testset.fa library 2636 residues in 23 query sequences 13355 residues in 93 library sequences Scomplib [34t24] start: Tue Aug 15 22:56:22 2006 done: Tue Aug 15 22:56:23 2006 Total Scan time: 0.370 Total Display time: 0.170 Function used was SSEARCH [version 3.4t24 June 23, 2004]