# fasta3.bin -Q -n -b 20 -d 20 -m 0 -z -1 -E 0.01 bio8570969075224297341.tmp.fasta @/home/psgendb/dat/fasta/gbvrt.fil 4 FASTA searches a protein or DNA sequence data bank version 35.04 Feb. 20, 2010 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: bio8570969075224297341.tmp.fasta 1>>>SRAAFP:CDS1 - 588 nt Library: @/home/psgendb/dat/fasta/gbvrt.fil 2460200059 residues in 663747 sequences 2463291763 residues in 669005 sequences Algorithm: FASTA (3.5 Sept 2006) [optimized] Parameters: +5/-4 matrix (5:-4) ktup: 4 join: 62, opt: 47, open/ext: -12/-4, width: 16 Scan time: 398.400 The best scores are: opt SRAAFP - Sea raven (Hemitripterus americanus) ( 874) [f] 2940 AB283044 - Brachyopsis rostratus mRNA for type ( 507) [f] 1313 SRAAFPG - Sea raven (H.americanus) antifreeze (2420) [f] 671 FJ826542 - Perca flavescens type II antifreeze (1242) [f] 490 FJ826540 - Perca flavescens type II antifreeze (1218) [f] 490 BT082916 - Anoplopoma fimbria clone afim-evh-5 ( 899) [f] 477 BT082572 - Anoplopoma fimbria clone afim-evh-5 ( 901) [f] 474 OSEAFP - Osmerus mordax antifreeze protein pre ( 611) [f] 460 EU660936 - Dicentrarchus labrax C-lectin-B (CL ( 719) [f] 446 DQ062448 - Osmerus mordax clone 14 type II ant ( 539) [f] 426 CUXANTIFRZ - Herring antifreeze protein mRNA, ( 654) [f] 356 S65819 - antifreeze protein type II [Clupea ha ( 653) [f] 356 DQ062447 - Clupea harengus clone 13 type II an ( 495) [f] 347 DQ062446 - Clupea harengus clone 12 type II an ( 495) [f] 338 FJ826539 - Perca flavescens type II antifreeze ( 859) [f] 308 FJ826541 - Perca flavescens type II antifreeze ( 869) [f] 299 EU136173 - Lates calcarifer type II antifreeze ( 824) [f] 294 DQ003023 - Clupea harengus type II antifreeze (1811) [f] 279 GU165767 - Paralichthys olivaceus serum lectin ( 663) [f] 261 AB220917 - Verasper variegatus VVL-2 mRNA for ( 669) [f] 234 >>SRAAFP - Sea raven (Hemitripterus americanus) antifree (874 nt) initn: 2940 init1: 2940 opt: 2940 banded Smith-Waterman score: 2940; 100.0% identity (100.0% similar) in 588 nt overlap (1-588:10-597) 10 20 30 40 50 SRAAFP ATGCAGAGGCAACAGGCTGACACTGAAACAAGAGAAGATATTTCTACAGCA ::::::::::::::::::::::::::::::::::::::::::::::::::: SRAAFP CACACATGAATGCAGAGGCAACAGGCTGACACTGAAACAAGAGAAGATATTTCTACAGCA 10 20 30 40 50 60 60 70 80 90 100 110 SRAAFP GGGCTATCAATCATCTTCATCGTCTGCACCATCTCTACCACGAGGATGCTGACTGTGTCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: SRAAFP GGGCTATCAATCATCTTCATCGTCTGCACCATCTCTACCACGAGGATGCTGACTGTGTCT 70 80 90 100 110 120 120 130 140 150 160 170 SRAAFP CTACTGGTTTGTGCCATGATGGCTCTGACTCAAGCTAATGATGACAAAATACTCAAAGGC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: SRAAFP CTACTGGTTTGTGCCATGATGGCTCTGACTCAAGCTAATGATGACAAAATACTCAAAGGC 130 140 150 160 170 180 180 190 200 210 220 230 SRAAFP ACGGCTACAGAGGCTGGACCGGTCTCTCAGAGAGCCCCACCAAACTGTCCCGCTGGTTGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: SRAAFP ACGGCTACAGAGGCTGGACCGGTCTCTCAGAGAGCCCCACCAAACTGTCCCGCTGGTTGG 190 200 210 220 230 240 240 250 260 270 280 290 SRAAFP CAACCTCTTGGTGACCGCTGTATCTATTATGAGACAACAGCGATGACTTGGGCTCTGGCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: SRAAFP CAACCTCTTGGTGACCGCTGTATCTATTATGAGACAACAGCGATGACTTGGGCTCTGGCT 250 260 270 280 290 300 300 310 320 330 340 350 SRAAFP GAGACAAACTGTATGAAATTGGGTGGACACCTTGCATCCATCCACAGCCAGGAGGAGCAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: SRAAFP GAGACAAACTGTATGAAATTGGGTGGACACCTTGCATCCATCCACAGCCAGGAGGAGCAT 310 320 330 340 350 360 360 370 380 390 400 410 SRAAFP AGTTTCATTCAGACCTTGAATGCTGGTGTTGTATGGATCGGAGGCTCCGCTTGCCTCCAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: SRAAFP AGTTTCATTCAGACCTTGAATGCTGGTGTTGTATGGATCGGAGGCTCCGCTTGCCTCCAG 370 380 390 400 410 420 420 430 440 450 460 470 SRAAFP GCAGGTGCTTGGACCTGGTCTGATGGTACACCTATGAATTTTCGTTCCTGGTGTTCTACC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: SRAAFP GCAGGTGCTTGGACCTGGTCTGATGGTACACCTATGAATTTTCGTTCCTGGTGTTCTACC 430 440 450 460 470 480 480 490 500 510 520 530 SRAAFP AAACCTGATGATGTACTGGCCGCGTGCTGTATGCAGATGACTGCTGCAGCTGACCAATGC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: SRAAFP AAACCTGATGATGTACTGGCCGCGTGCTGTATGCAGATGACTGCTGCAGCTGACCAATGC 490 500 510 520 530 540 540 550 560 570 580 SRAAFP TGGGATGACTTGCCTTGTCCGGCATCCCACAAATCAGTCTGCGCCATGACATTCTGA ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: SRAAFP TGGGATGACTTGCCTTGTCCGGCATCCCACAAATCAGTCTGCGCCATGACATTCTGAGCT 550 560 570 580 590 600 SRAAFP AACACAGAGGCCATCCATCACACAAACACTTTAGTGGGTGTTTGATTGTGTGTGTTCGCA 610 620 630 640 650 660 >>AB283044 - Brachyopsis rostratus mRNA for type II anti (507 nt) initn: 1689 init1: 1283 opt: 1313 banded Smith-Waterman score: 1647; 81.7% identity (81.7% similar) in 498 nt overlap (97-582:1-498) 70 80 90 100 110 120 SRAAFP TTCATCGTCTGCACCATCTCTACCACGAGGATGCTGACTGTGTCTCTACTGGTTTGTGCC :::::::::::::::::::::::::::::: AB2830 ATGCTGACTGTGTCTCTACTGGTTTGTGCC 10 20 30 130 140 150 160 170 180 SRAAFP ATGATGGCTCTGACTCAAGCTAATGATGACAAAATACTCAAAGGCACGGCTACAGAGGCT ::::::::::::::::::::: :: ::::: : ::::::::::::::::: :::::: AB2830 ATGATGGCTCTGACTCAAGCTGATCATGACGGTGTGCTCAAAGGCACGGCTACGGAGGCT 40 50 60 70 80 90 190 200 210 220 230 SRAAFP GGACCGGTCTCTCAG------AGAGCCC------CACCAAACTGTCCCGCTGGTTGGCAA ::: :::::::: : : ::: : : : :::::::: :::::: : AB2830 GGAGAGGTCTCTCCGGTCTTTCGGTCCCGGAGAGCTCTAGTATGTCCCGCCGGTTGGACA 100 110 120 130 140 150 240 250 260 270 280 290 SRAAFP CCTCTTGGTGACCGCTGTATCTATTATGAGACAACAGCGATGACTTGGGCTCTGGCTGAG : :: :::: : :::::: :::::: :::: ::::::: :::::::::: :::::::::: AB2830 CTTCATGGTCAACGCTGTTTCTATTCTGAGGCAACAGCTATGACTTGGGATCTGGCTGAG 160 170 180 190 200 210 300 310 320 330 340 350 SRAAFP ACAAACTGTATGAAATTGGGTGGACACCTTGCATCCATCCACAGCCAGGAGGAGCATAGT :::::::: :::: ::::::::::::::::::::::::::::: ::::::::: : AB2830 GCAAACTGTGTGAACAAGGGTGGACACCTTGCATCCATCCACAGCCTGGAGGAGCAACTT 220 230 240 250 260 270 360 370 380 390 400 410 SRAAFP TTCATTCAGACCTTGAATGCTGGTGTTGTATGGATCGGAGGCTCCGCTTGCCTCCAGGCA : :::: :: : : ::::: : :::::::::::::::::::::::: :::: AB2830 TACATTAAGGACATAGTAGCTGGAATAGTATGGATCGGAGGCTCCGCTTGCAAAGTGGCA 280 290 300 310 320 330 420 430 440 450 460 470 SRAAFP GGTGCTTGGACCTGGTCTGATGGTACACCTATGAATTTTCGTTCCTGGTGTTCTACCAAA ::::::::: ::::: :::::::::::::: :: ::: :::: :::::::: :::::::: AB2830 GGTGCTTGGTCCTGGACTGATGGTACACCTGTGGATTATCGTACCTGGTGTCCTACCAAA 340 350 360 370 380 390 480 490 500 510 520 530 SRAAFP CCTGATGATGTACTGGCCGCGTGCTGTATGCAGATGACTGCTGCAGCTGACCAATGCTGG ::: ::::: ::::: :: ::::::::::::::::::::::::: :::: :::::::: AB2830 CCTAATGATATACTGAGCGATTGCTGTATGCAGATGACTGCTGCAGTTGACAAATGCTGG 400 410 420 430 440 450 540 550 560 570 580 SRAAFP GATGACTTGCCTTGTCCGGCATCCCACAAATCAGTCTGCGCCATGACATTCTGA ::::::::::::::::: :: :::::: :::: ::::::::: : :: AB2830 GATGACTTGCCTTGTCCAGCGTCCCACGCATCAATCTGCGCCAAGGCAGCCATATAA 460 470 480 490 500 >>SRAAFPG - Sea raven (H.americanus) antifreeze protein (2420 nt) initn: 1735 init1: 667 opt: 671 banded Smith-Waterman score: 671; 92.9% identity (92.9% similar) in 154 nt overlap (158-311:1246-1399) 130 140 150 160 170 180 SRAAFP TGATGGCTCTGACTCAAGCTAATGATGACAAAATACTCAAAGGCACGGCTACAGAGGCTG :::::::::::::::::::::::::::::: SRAAFP CATGTTACCCACTCTTCTGTTTGTCCTCAGAAATACTCAAAGGCACGGCTACAGAGGCTG 1220 1230 1240 1250 1260 1270 190 200 210 220 230 240 SRAAFP GACCGGTCTCTCAGAGAGCCCCACCAAACTGTCCCGCTGGTTGGCAACCTCTTGGTGACC :::::::::::::::::::: :::::::::::::::::::::::::::::::::::::: SRAAFP GACCGGTCTCTCAGAGAGCCGGACCAAACTGTCCCGCTGGTTGGCAACCTCTTGGTGACC 1280 1290 1300 1310 1320 1330 250 260 270 280 290 300 SRAAFP GCTGTATCTATTATGAGACAACAGCGATGACTTGGGCTCTGGCTGAGACAAACTGTATGA ::::::::::::::::::::::::::::::::::::::::::::::: : : : :: SRAAFP GCTGTATCTATTATGAGACAACAGCGATGACTTGGGCTCTGGCTGAGGTAGTCAGGATAT 1340 1350 1360 1370 1380 1390 310 320 330 340 350 360 SRAAFP AATTGGGTGGACACCTTGCATCCATCCACAGCCAGGAGGAGCATAGTTTCATTCAGACCT ::: SRAAFP GATTATGATTCAGATTGCTTCTAAACTGGTCTGGTGGTATTGCCTTACATGCTCGGTTAA 1400 1410 1420 1430 1440 1450 >>FJ826542 - Perca flavescens type II antifreeze protein (1242 nt) initn: 719 init1: 297 opt: 490 banded Smith-Waterman score: 490; 64.2% identity (64.2% similar) in 296 nt overlap (70-364:34-322) 40 50 60 70 80 90 SRAAFP ATTTCTACAGCAGGGCTATCAATCATCTTCATCGTCTGCACCATCTCTACCACGAGGATG :: :::::: ::::: :::: : :::: FJ8265 AAGACCACAGGCTGAATCTGAGAAAGAAGAATTATCTGCATTATCTCCGCCACCAAGATG 10 20 30 40 50 60 100 110 120 130 140 150 SRAAFP CTGACTGTGTCTCTACTGGTTTGTGCCATGATGGCTCTGACTCAAGCTAATGATGACAAA ::::::::::::::::: ::::::::::::::::::::: :: ::: ::::::: : FJ8265 CTGACTGTGTCTCTACTCGTTTGTGCCATGATGGCTCTGGCTACAGC---TGATGACGTA 70 80 90 100 110 120 160 170 180 190 200 210 SRAAFP ATACTCAAAGGCACGGCTACAGA-GGCTGGACCGGTCTCTCAGAGAGCCCCACCAAACTG :: :: ::::: : : :: : : :::: :::: : :: FJ8265 GATGTCGCTTCCAACAACACAGATGTCACTTCCAGCTACGAAGAGGGCCCTGC----TTG 130 140 150 160 170 220 230 240 250 260 270 SRAAFP TCCCGCTGGTTGGCAACCTCTTGGTGACCGCTGTATCTATTATGAGACAACAGCGATGAC ::: ::: :::::: ::: :::::: :: :: : : : : : :: FJ8265 TCCTGCTTCTTGGCATAAGTACAATGATCGCTGTTTCCTCTACGTTCCTAGAACAGTGGA 180 190 200 210 220 230 280 290 300 310 320 330 SRAAFP TTGGGCTCTGGCTGAGACAAACTGTATGAAATTGGGTGGACACCTTGCATCCATCCACAG :::: :: ::::::: :::::: : : : ::: :::::::::: : ::::: FJ8265 TTGGTCTGACGCTGAGAAAAACTGCCAGTCCTCGAAAGGAAACCTTGCATCAGTGCACAG 240 250 260 270 280 290 340 350 360 370 380 390 SRAAFP CCAGGAGGAGCATAGTTTCATTCAGACCTTGAATGCTGGTGTTGTATGGATCGGAGGCTC :::::: :: :::::::::: FJ8265 TATTGAGGAGTATCAGTTCATTCAGATGATAATCACACAACAGACTCATGCTAATCCAAT 300 310 320 330 340 350 >>FJ826540 - Perca flavescens type II antifreeze protein (1218 nt) initn: 799 init1: 297 opt: 490 banded Smith-Waterman score: 658; 60.0% identity (60.0% similar) in 530 nt overlap (70-577:34-556) 40 50 60 70 80 90 SRAAFP ATTTCTACAGCAGGGCTATCAATCATCTTCATCGTCTGCACCATCTCTACCACGAGGATG :: :::::: ::::: :::: : :::: FJ8265 AAGACCACAGGCTGAATCTGAGAAAGAAGAATTATCTGCATTATCTCCGCCACCAAGATG 10 20 30 40 50 60 100 110 120 130 140 150 SRAAFP CTGACTGTGTCTCTACTGGTTTGTGCCATGATGGCTCTGACTCAAGCTAATGATGACAAA ::::::::::::::::: ::::::::::::::::::::: :: ::: ::::::: : FJ8265 CTGACTGTGTCTCTACTCGTTTGTGCCATGATGGCTCTGGCTACAGC---TGATGACGTA 70 80 90 100 110 120 160 170 180 190 200 210 SRAAFP ATACTCAAAGGCACGGCTACAGA-GGCTGGACCGGTCTCTCAGAGAGCCCCACCAAACTG :: :: ::::: : : :: : : :::: :::: : :: FJ8265 GATGTCGCTTCCAACAACACAGATGTCACTTCCAGCTACGAAGAGGGCCCTGC----TTG 130 140 150 160 170 220 230 240 250 260 270 SRAAFP TCCCGCTGGTTGGCAACCTCTTGGTGACCGCTGTATCTATTATGAGACAACAGCGATGAC ::: ::: :::::: ::: :::::: :: :: : : : : : :: FJ8265 TCCTGCTTCTTGGCATAAGTACAATGATCGCTGTTTCCTCTACGTTCCTAGAACAGTGGA 180 190 200 210 220 230 280 290 300 310 320 330 SRAAFP TTGGGCTCTGGCTGAGACAAACTGTATGAAATTGGGTGGACACCTTGCATCCATCCACAG :::: :: ::::::: :::::: : : : ::: :::::::::: : ::::: FJ8265 TTGGTCTGACGCTGAGAAAAACTGCCAGTCCTCGAAAGGAAACCTTGCATCAGTGCACAG 240 250 260 270 280 290 340 350 360 370 380 SRAAFP CCAGGAGGAGCATAGTTTCATTCAGACCTTGA---------------ATGCTGGT---GT :::::: :: :::::::::: : : ::::: : : FJ8265 TATTGAGGAGTATCAGTTCATTCAGATGATAATCACACAACAGACTCATGCTAATCCAAT 300 310 320 330 340 350 390 400 410 420 430 440 SRAAFP TGTATGGATCGGAGGCTCCGCTTGCCTCCAGGCAGGTGCTTGGACCTGGTCTGATGGTAC ::::: :::::: : :: :::: :: :: :::: :::: :::::: : FJ8265 GACCTGGATTGGAGGCACTGCCTGCCAGAAGCATAGTAATTGGTTCTGGAGTGATGGCAG 360 370 380 390 400 410 450 460 470 480 490 SRAAFP ACCTATGAATTTTCGTTCCTGGTGTTCTACCAAACCTGATGATGTA-CTGGC--CGCGTG :::: : ::: : ::::::: : :::: : ::: : :::: : : : FJ8265 ACCTTTCTCCTTTACATTCTGGTGTGCAGGGGAACCCAACAATGCAGGTGGCAACCAGGG 420 430 440 450 460 470 500 510 520 530 540 550 SRAAFP CTGTATGCAGATGACTGCTGCAGCTGACCAATGCTGGGATGACTTGCCTTGTCCGGCATC ::: : : ::::: : :: :: :: : ::::::::::: : : ::: : : FJ8265 TTGTCTCCGGATGAATTATGGAGAGCACAACTGCTGGGATGATATCCAGTGTTCTGACAA 480 490 500 510 520 530 560 570 580 SRAAFP CCACAAATCAGTCTGCGCCATGACATTCTGA : ::: ::::: :::: FJ8265 ACTTCCATCTGTCTGTGCCAGAAACCCATAAGAATCTCCGGAGCTGACACAGAGATAAAT 540 550 560 570 580 590 >>BT082916 - Anoplopoma fimbria clone afim-evh-521-075 T (899 nt) initn: 670 init1: 285 opt: 477 banded Smith-Waterman score: 477; 63.3% identity (63.3% similar) in 324 nt overlap (58-372:54-369) 30 40 50 60 70 80 SRAAFP ACAAGAGAAGATATTTCTACAGCAGGGCTATCAATCATCTTCATCGTCTGCACCATCTCT :::: ::::: :::: :: :: :::: BT0829 GCAGACGTCGGTATCAGGTAGCCTTCATCTTCAA-CATCTGCATCATC-CCATCATCCTC 30 40 50 60 70 80 90 100 110 120 130 140 SRAAFP ACCACGAGGATGCTGACTGTGTCTCTACTGGTTTGTGCCATGATGGCTCTGACTCAAGCT :::: :: :: ::::::::::::: ::: ::::::::: :::::: :::::::: :::: BT0829 ACCATGAAGACGCTGACTGTGTCTGCACTTGTTTGTGCCCTGATGGTTCTGACTCGAGCT 90 100 110 120 130 140 150 160 170 180 190 SRAAFP AATGAT------GACAAAATAC---TCAAAGGCACGGCTACAGAGGCTGGACCGGTCTCT :: : :: ::: : : :::: : :: :: : : :::: BT0829 GCTGTTCTTCCAGATGGAATGCCTGTAAAAGACCAAATAGCAAAGAGTCATCTGGTC--- 150 160 170 180 190 200 210 220 230 240 250 SRAAFP CAGAGAGCCCCACCAAACTGTCCCGCTGGTTGGCAACCTCTTGGTGACCGCTGTATCTAT :::: :: : ::::::: :::::: :: : : :: :::::: :: BT0829 AAGAGGTCCGTGTC---TTGTCCCGGAGGTTGGAGTCCGTTCGATGGTCGCTGTTTCCGC 200 210 220 230 240 250 260 270 280 290 300 310 SRAAFP TATGAGACAACAGCGATGACTTGGGCTCTGGCTGAGACAAACTGTATGAAATTGGGTGGA :: ::: : : ::::::::::: ::::::: ::::::: : :::: ::: BT0829 TACTTTCCAAGACCTCTGACTTGGGCTAAAGCTGAGAAAAACTGTGAGTCCATGGGAGGA 260 270 280 290 300 310 320 330 340 350 360 370 SRAAFP CACCTTGCATCCATCCACAGCCAGGAGGAGCATAGTTTCATTCAGACCTTGAATGCTGGT ::::::::::: : :::: : :::: : : ::::::: ::: : BT0829 AACCTTGCATCCGTTCACAACATCCTGGAGTACCATGAGATTCAGAGGCTGATTCTGAGC 320 330 340 350 360 370 380 390 400 410 420 430 SRAAFP GTTGTATGGATCGGAGGCTCCGCTTGCCTCCAGGCAGGTGCTTGGACCTGGTCTGATGGT BT0829 GGCAGTCATGAGCATAAGGAAACTTGGGTTGGAGGCTCTGATGCACAAGAGGAGAAGCAA 380 390 400 410 420 430 >>BT082572 - Anoplopoma fimbria clone afim-evh-513-168 T (901 nt) initn: 664 init1: 272 opt: 474 banded Smith-Waterman score: 477; 62.2% identity (62.2% similar) in 336 nt overlap (54-372:42-371) 30 40 50 60 70 80 SRAAFP TGAAACAAGAGAAGATATTTCTACAGCAGGGCTATCAATCATCTTCATCGTCTGCACCAT : :: : ::::::::: : :::::: ::: BT0825 GGACGGCTGGATCTGCAGACGTCAGTATCAGGTAGCCTTCATCTTCAGCATCTGCATCAT 20 30 40 50 60 70 90 100 110 120 130 SRAAFP CTC--------TACCACGAGGATGCTGACTGTGTCTCTACTGGTTTGTGCCATGATGGCT ::: :::: :: :: ::::::::::::: ::: ::::::::: :::::: : BT0825 CTCATCATCCTCACCATGAAGACGCTGACTGTGTCTGCACTTGTTTGTGCCCTGATGGTT 80 90 100 110 120 130 140 150 160 170 180 SRAAFP CTGACTCAAGCTAATGAT------GACAAAATAC---TCAAAGGCACGGCTACAGAGGCT ::::::: :::: :: : :: ::: : : :::: : :: :: : BT0825 CTGACTCGAGCTGCTGTTCTTCCAGATGGAATGCCTGTAAAAGACCAAATAGCAAAGAGT 140 150 160 170 180 190 190 200 210 220 230 240 SRAAFP GGACCGGTCTCTCAGAGAGCCCCACCAAACTGTCCCGCTGGTTGGCAACCTCTTGGTGAC : :::: :::: :: : ::::::: :::::: :: : :: BT0825 CATCTGGTC---AAGAGGTCCGTGTC---TTGTCCCGGAGGTTGGAGTCCGTTCAATGGT 200 210 220 230 240 250 260 270 280 290 300 SRAAFP CGCTGTATCTATTATGAGACAACAGCGATGACTTGGGCTCTGGCTGAGACAAACTGTATG :::::: :: :: ::: : : ::::::::::: ::::::: ::::::: : BT0825 CGCTGTTTCCGCTACTTTCCAAGACCTCTGACTTGGGCTAAAGCTGAGAAAAACTGTGAG 250 260 270 280 290 300 310 320 330 340 350 360 SRAAFP AAATTGGGTGGACACCTTGCATCCATCCACAGCCAGGAGGAGCATAGTTTCATTCAGACC :::: ::: ::::::::::: : :::: : :::: : : ::::::: BT0825 TCCATGGGAGGAAACCTTGCATCCGTTCACAACATCCTGGAGTACCATGAGATTCAGAGG 310 320 330 340 350 360 370 380 390 400 410 420 SRAAFP TTGAATGCTGGTGTTGTATGGATCGGAGGCTCCGCTTGCCTCCAGGCAGGTGCTTGGACC ::: : BT0825 CTGATTCTGAGCGGCAGTCATGAGTATAAGCAAACCTGGGTTGGAGGCTCTGATGCACAA 370 380 390 400 410 420 >>OSEAFP - Osmerus mordax antifreeze protein precursor m (611 nt) initn: 776 init1: 367 opt: 460 banded Smith-Waterman score: 807; 63.4% identity (63.4% similar) in 573 nt overlap (25-581:2-547) 10 20 30 40 50 60 SRAAFP ATGCAGAGGCAACAGGCTGACACTGAAACAAGAGAAGATATTTCTACAGCAGGGCTATCA :: : ::::::: :::::: : :: :::: : OSEAFP AGACAGAAGAGAATATATTTTTCCAACAGGTC----- 10 20 30 70 80 90 100 110 120 SRAAFP ATCATCTTCATCGTCTGCACCATCTCTACCACGAGGATGCTGACTGTGTCTCTACTGGTT :::: : ::: :: ::::: ::::: ::::::::: ::: ::::::: ::: OSEAFP ATCAACGTCAAAGT------GATCTCCACCACCAGGATGCTGGCTG---CTCTACTTGTT 40 50 60 70 80 130 140 150 160 170 180 SRAAFP TGTGCCATGATGGCTCTGACTCAAGCTAATGATGACAAAATACTCAAAGGCACGGCTACA ::::::::: :::::::::: :: : : :: :::: : : ::::: : : OSEAFP TGTGCCATGGTGGCTCTGAC-CAGG-----GCTG--CAAATGGT----GACACGGGGAAA 90 100 110 120 130 190 200 210 220 230 SRAAFP GAGGCTG----GAC-CGGTCTCTCAGAGAG-CCCCACCAAACTGTCCCGCTGGTTGGCAA ::::::: ::: :::: :: :: :: : :::::: ::: :::: : OSEAFP GAGGCTGTGATGACAGGGTCCAGTGGAAAGAATTTGACAGAATGTCCCACTGATTGGAAG 140 150 160 170 180 190 240 250 260 270 280 290 SRAAFP CCTCTTGGTGACCGCTGTATCTATTATGAGACAACAGCGATGACTTGGGCTCTGGCTGAG : :: :::::: :: :: : : :: : :: :::::::: ::: :: OSEAFP ATGTTCAATGGTCGCTGTTTCCTTTTTAATCCATTACAATTGCATTGGGCTCACGCTCAG 200 210 220 230 240 250 300 310 320 330 340 350 SRAAFP ACAAACTGTATGAAATTGGGTGGACACCTTGCATCCATCCACAGCCAGGAGGAGCATAGT : :: ::: ::::: :: : : ::::::::::::: ::::::: :: ::: :: OSEAFP ATAAGCTGCATGAAGGATGGGGCAAACCTTGCATCCATACACAGCCTTGAAGAGTATGCG 260 270 280 290 300 310 360 370 380 390 400 SRAAFP TTCATTCAGACCTTG---AATGCTGGTGT------TGTATGGATCGGAGGCTCCGCTTGC :: :: :: :: : ::: :: : : :::::: :::::::: : :::: OSEAFP TTTGTTAAGGAGCTGACAACTGCAGGCTTAATACCAGCATGGATTGGAGGCTCAGATTGC 320 330 340 350 360 370 410 420 430 440 450 460 SRAAFP CTCCAGGCAGGTGCTTGGACCTGGTCTGATGGTACACCTATGAATTTTCGTTCCTGGTGT : : :: :::: ::: ::: ::::: :::: ::::: : :::::: OSEAFP CATGTGTCAACATATTGGTTTTGGATGGATAGTACAAGTATGGATTTTACTGACTGGTGC 380 390 400 410 420 430 470 480 490 500 510 520 SRAAFP TCTACCAAACCTGATGATGTACTGGCCGCGTGCTGTATGCAGATGACTGCTGCAGCTGAC :: : :::::::: : : : : :::::: :: ::::: : :: :: :: :: OSEAFP GCTGCACAACCTGATTTTACCTTAACTGAGTGCTGCATACAGATAAATGTTGGAGTTGGA 440 450 460 470 480 490 530 540 550 560 570 580 SRAAFP CAATGCTGGGATGACTTGCCTTGTCCGGCATC-CCACAAATCAGTCTGCGCCATGACATT :::::::: ::::: :::::: : :::: :: :::::::::::::: : : OSEAFP AAATGCTGGAATGACACACCTTGTAC-CCATCTTCATGCATCAGTCTGCGCCAAGCCTGC 500 510 520 530 540 550 SRAAFP CTGA OSEAFP CACCGTGATTCCCGAGGTGACACCACCATCAATCATGTGATTGTGTGTATGTTTGCATAC 560 570 580 590 600 610 >>EU660936 - Dicentrarchus labrax C-lectin-B (CLB) mRNA, (719 nt) initn: 665 init1: 303 opt: 446 banded Smith-Waterman score: 446; 64.3% identity (64.3% similar) in 283 nt overlap (88-363:58-336) 60 70 80 90 100 110 SRAAFP TCAATCATCTTCATCGTCTGCACCATCTCTACCACGAGGATGCTGACTGTGTCTCTACTG : :: :: ::::::::::::::::::::: EU6609 AAGCGGACAAAGAAGATAATCCAGCTGGAGATCATGAAGATGCTGACTGTGTCTCTACTC 30 40 50 60 70 80 120 130 140 150 160 170 SRAAFP GTTTGTGCCATGATGGCTCTGACTCAAGCTAATGATGACAAAATACTCAAAGGCACGGCT :: ::::::::::::::: ::: :::: :: :: : : :: :: :: : : EU6609 GTCTGTGCCATGATGGCTTGGACCACAGCTGCTGCTG-TTCCAGAAGCAGAG--ACCGGT 90 100 110 120 130 140 180 190 200 210 220 230 SRAAFP ACAGAGGCTGGACCGGTC-TCTCAG------AGAGCCCCACCAAACTGTCCCGCTGGTTG :: : : : : : :: :: : :: :::: : :::::: ::::::: EU6609 GAAGGGACAGAATTATCCATCCAAGGAGGGAATAGTCCCATC-GCTTGTCCCACTGGTTG 150 160 170 180 190 200 240 250 260 270 280 290 SRAAFP GCAACCTCTTGGTGACCGCTGTATCTATTATGAGACAACAGCGATGACTTGGGCTCTGGC : : :: :::::: :: ::: :::::: ::::::::::: :: EU6609 GACTGGTTACAACGATCGCTGTTTCATCTATATTCCAACAGAAATGACTTGGGCAGATGC 210 220 230 240 250 260 300 310 320 330 340 350 SRAAFP TGAGACAAACTGTATGAAATTGGGTGGACACCTTGCATCCATCCACAGCCAGGAGGAGCA ::::: ::::::: : : ::::::: :::: ::::: : :::::: :::::::: EU6609 TGAGAAAAACTGTCAGGATCGGGGTGGAAACCTGGCATCGGTGCACAGCTTTGAGGAGCA 270 280 290 300 310 320 360 370 380 390 400 410 SRAAFP TAGTTTCATTCAGACCTTGAATGCTGGTGTTGTATGGATCGGAGGCTCCGCTTGCCTCCA : :::::: EU6609 TCAAGCAATTCAGGGTATGATCCTGATTCTCACACAGGCGTATCCACTCACATGGCTTGG 330 340 350 360 370 380 >>DQ062448 - Osmerus mordax clone 14 type II antifreeze (539 nt) initn: 754 init1: 367 opt: 426 banded Smith-Waterman score: 723; 63.3% identity (63.3% similar) in 510 nt overlap (88-581:1-494) 60 70 80 90 100 110 SRAAFP TCAATCATCTTCATCGTCTGCACCATCTCTACCACGAGGATGCTGACTGTGTCTCTACTG ::::: ::::::::: ::: ::::::: DQ0624 ACCACCAGGATGCTGGCTG---CTCTACTT 10 20 120 130 140 150 160 170 SRAAFP GTTTGTGCCATGATGGCTCTGACTCAAGCTAATGATGACAAAATACTCAAAGGCACGGCT :::::::::::: :::::::::: :: : : :: :::: : : ::::: DQ0624 GTTTGTGCCATGGTGGCTCTGAC-CAGG-----GCTG--CAAATGGT----GACACGGGG 30 40 50 60 70 180 190 200 210 220 230 SRAAFP ACAGAGGCTG----GAC-CGGTCTCTCAGAGAG-CCCCACCAAACTGTCCCGCTGGTTGG : :::::::: ::: :::: :: :: :: : :::::: ::: :::: DQ0624 AAAGAGGCTGTGATGACAGGGTCCAGTGGAAAGAATTTGACAGAATGTCCCACTGATTGG 80 90 100 110 120 130 240 250 260 270 280 290 SRAAFP CAACCTCTTGGTGACCGCTGTATCTATTATGAGACAACAGCGATGACTTGGGCTCTGGCT : : :: :::::: : :: : : :: : :: :::::::: ::: DQ0624 AAGATGTTCAATGGTCGCTGTTCCCTTTTTAATCCATTACAATTGCATTGGGCTCACGCT 140 150 160 170 180 190 300 310 320 330 340 350 SRAAFP GAGACAAACTGTATGAAATTGGGTGGACACCTTGCATCCATCCACAGCCAGGAGGAGCAT ::: :: ::: ::::: :: : : ::::::::::::: ::::::: :: ::: :: DQ0624 CAGATAAGCTGCATGAAGGATGGGGCAAACCTTGCATCCATACACAGCCTTGAAGAGTAT 200 210 220 230 240 250 360 370 380 390 400 SRAAFP AGTTTCATTCAGACCTTG---AATGCTGGTGT------TGTATGGATCGGAGGCTCCGCT :: :: :: :: : ::: :: : : :::::: :::::::: : : DQ0624 GCGTTTGTTAAGGAGCTGACAACTGCAGGCTTAATACCAGCATGGATTGGAGGCTCAGAT 260 270 280 290 300 310 410 420 430 440 450 460 SRAAFP TGCCTCCAGGCAGGTGCTTGGACCTGGTCTGATGGTACACCTATGAATTTTCGTTCCTGG :::: : :: :::: ::: ::: ::::: :::: ::::: : :::: DQ0624 TGCCATGTGTCAACATATTGGTTTTGGATGGATAGTACAAGTATGGATTTTACTGACTGG 320 330 340 350 360 370 470 480 490 500 510 520 SRAAFP TGTTCTACCAAACCTGATGATGTACTGGCCGCGTGCTGTATGCAGATGACTGCTGCAGCT :: :: : :::::::: : : : : :::::: :: ::::: : :: :: :: : DQ0624 TGCGCTGCACAACCTGATTTTACCTTAACTGAGTGCTGCATACAGATAAATGTTGGAGTT 380 390 400 410 420 430 530 540 550 560 570 580 SRAAFP GACCAATGCTGGGATGACTTGCCTTGTCCGGCATC-CCACAAATCAGTCTGCGCCATGAC : :::::::: ::::: :::::: : :::: :: :::::::::::::: : : DQ0624 GGAAAATGCTGGAATGACACACCTTGTAC-CCATCTTCATGCATCAGTCTGCGCCAAGCC 440 450 460 470 480 490 SRAAFP ATTCTGA DQ0624 TGCCACCGTGATTCCCGAGGTGACACCACCATCAATCATGTGATT 500 510 520 530 >>CUXANTIFRZ - Herring antifreeze protein mRNA, complete (654 nt) initn: 909 init1: 340 opt: 356 banded Smith-Waterman score: 565; 62.4% identity (62.4% similar) in 380 nt overlap (215-584:160-538) 190 200 210 220 230 240 SRAAFP CTGGACCGGTCTCTCAGAGAGCCCCACCAAACTGTCCCGCTGGTTGGCAACCTCTTGGTG : :::::: ::: :::: : : :: CUXANT CCATCGTGGCTCTGACTAGGGCTGCTGATGAATGTCCCACTGATTGGAAGATGTTCAATG 130 140 150 160 170 180 250 260 270 280 290 300 SRAAFP ACCGCTGTATCTATTATGAGACAACAGCGATGACTTGGGCTCTGGCTGAGACAAACTGTA :::::: :: :: : : :: : :: ::::::: ::: :: :: ::::: CUXANT GTCGCTGTTTCCTTTTTAATCCATTACAATTGCATTGGGCTGACGCTCAGGAAAGCTGTA 190 200 210 220 230 240 310 320 330 340 350 360 SRAAFP TGAAATTGGGTGGACACCTTGCATCCATCCACAGCCAGGAGGAGCATAGTTTCATTCAGA :::: ::: : : ::::::::::::: ::::::: :: ::: :: :: :: :: CUXANT TGAAGGAGGGGGCAAACCTTGCATCCATTCACAGCCTTGAAGAGTCTACGTTTGTTAAGG 250 260 270 280 290 300 370 380 390 400 410 SRAAFP CCTTG---AATGCTGGTGTTGT------ATGGATCGGAGGCTCCGCTTGCCTCCAGGCAG :: : ::: : : : :::::: :::::: : : ::::: : :: CUXANT AGCTGACAAGTGCAGACTTAATCCCATCATGGATTGGAGGCACAGATTGCCAAGTGTCAA 310 320 330 340 350 360 420 430 440 450 460 470 SRAAFP GTGCTTGGACCTGGTCTGATGGTACACCTATGAATTTTCGTTCCTGGTGTTCTACCAAAC :::: ::: ::: : ::: :::: ::: : : :::::: :: : ::: CUXANT CCCGTTGGTTTTGGATGGATAGCACAAGTATGGATTATGCTGACTGGTGCGCTGCACAAC 370 380 390 400 410 420 480 490 500 510 520 530 SRAAFP CTGATGATGTACTGGCCGCGTGCTGTATGCAGATGACTGCTGCAGCTGACCAATGCTGGG ::::: : : : : :::::: :: ::::::: :: :: : :: :::::::: CUXANT CTGATACTACCTTAACTGAGTGCTGCATACAGATGAATGTTGGAATTGGAAAATGCTGGA 430 440 450 460 470 480 540 550 560 570 580 SRAAFP ATGACTTGCCTTGTCCGGCATC-CCACAAATCAGTCTGCGCCATGACATTCTGA ::::: :::::: : ::::: :: :::: ::::::::: : :: : CUXANT ATGACACACCTTGTAC-GCATCTTCATTCATCAATCTGCGCCAAGCCACTGAAATGATTC 490 500 510 520 530 540 CUXANT CTGAGCTGACACAGAGGCATCCACCACCATCAATCACGTGATTGTGTGTATGTTTGCATA 550 560 570 580 590 600 >>S65819 - antifreeze protein type II [Clupea harengus=h (653 nt) initn: 909 init1: 340 opt: 356 banded Smith-Waterman score: 565; 62.4% identity (62.4% similar) in 380 nt overlap (215-584:160-538) 190 200 210 220 230 240 SRAAFP CTGGACCGGTCTCTCAGAGAGCCCCACCAAACTGTCCCGCTGGTTGGCAACCTCTTGGTG : :::::: ::: :::: : : :: S65819 CCATCGTGGCTCTGACTAGGGCTGCTGATGAATGTCCCACTGATTGGAAGATGTTCAATG 130 140 150 160 170 180 250 260 270 280 290 300 SRAAFP ACCGCTGTATCTATTATGAGACAACAGCGATGACTTGGGCTCTGGCTGAGACAAACTGTA :::::: :: :: : : :: : :: ::::::: ::: :: :: ::::: S65819 GTCGCTGTTTCCTTTTTAATCCATTACAATTGCATTGGGCTGACGCTCAGGAAAGCTGTA 190 200 210 220 230 240 310 320 330 340 350 360 SRAAFP TGAAATTGGGTGGACACCTTGCATCCATCCACAGCCAGGAGGAGCATAGTTTCATTCAGA :::: ::: : : ::::::::::::: ::::::: :: ::: :: :: :: :: S65819 TGAAGGAGGGGGCAAACCTTGCATCCATTCACAGCCTTGAAGAGTCTACGTTTGTTAAGG 250 260 270 280 290 300 370 380 390 400 410 SRAAFP CCTTG---AATGCTGGTGTTGT------ATGGATCGGAGGCTCCGCTTGCCTCCAGGCAG :: : ::: : : : :::::: :::::: : : ::::: : :: S65819 AGCTGACAAGTGCAGACTTAATCCCATCATGGATTGGAGGCACAGATTGCCAAGTGTCAA 310 320 330 340 350 360 420 430 440 450 460 470 SRAAFP GTGCTTGGACCTGGTCTGATGGTACACCTATGAATTTTCGTTCCTGGTGTTCTACCAAAC :::: ::: ::: : ::: :::: ::: : : :::::: :: : ::: S65819 CCCGTTGGTTTTGGATGGATAGCACAAGTATGGATTATGCTGACTGGTGCGCTGCACAAC 370 380 390 400 410 420 480 490 500 510 520 530 SRAAFP CTGATGATGTACTGGCCGCGTGCTGTATGCAGATGACTGCTGCAGCTGACCAATGCTGGG ::::: : : : : :::::: :: ::::::: :: :: : :: :::::::: S65819 CTGATACTACCTTAACTGAGTGCTGCATACAGATGAATGTTGGAATTGGAAAATGCTGGA 430 440 450 460 470 480 540 550 560 570 580 SRAAFP ATGACTTGCCTTGTCCGGCATC-CCACAAATCAGTCTGCGCCATGACATTCTGA ::::: :::::: : ::::: :: :::: ::::::::: : :: : S65819 ATGACACACCTTGTAC-GCATCTTCATTCATCAATCTGCGCCAAGCCACTGAAATGATTC 490 500 510 520 530 540 S65819 CTGAGCTGACACAGAGGCATCCACCACCATCAATCACGTGATTGTGTGTATGTTTGCATA 550 560 570 580 590 600 >>DQ062447 - Clupea harengus clone 13 type II antifreeze (495 nt) initn: 762 init1: 331 opt: 347 banded Smith-Waterman score: 556; 62.1% identity (62.1% similar) in 380 nt overlap (215-584:68-446) 190 200 210 220 230 240 SRAAFP CTGGACCGGTCTCTCAGAGAGCCCCACCAAACTGTCCCGCTGGTTGGCAACCTCTTGGTG : :::::: ::: :::: : : :: DQ0624 CCATCGTGGCTCTGACTAGGGCTGCTGACGAATGTCCCTCTGATTGGAAGATGTTCAATG 40 50 60 70 80 90 250 260 270 280 290 300 SRAAFP ACCGCTGTATCTATTATGAGACAACAGCGATGACTTGGGCTCTGGCTGAGACAAACTGTA :::::: :: :: : : :: : :: ::::::: ::: :: :: ::::: DQ0624 GTCGCTGTTTCCTTTTTAATCCATTACAATTGCATTGGGCTGACGCTCAGGAAAGCTGTA 100 110 120 130 140 150 310 320 330 340 350 360 SRAAFP TGAAATTGGGTGGACACCTTGCATCCATCCACAGCCAGGAGGAGCATAGTTTCATTCAGA :::: ::: : : ::::::::::::: ::::::: :: ::: :: :: :: :: DQ0624 TGAAGGAGGGGGCATACCTTGCATCCATTCACAGCCTTGAAGAGTCTACGTTTGTTAAGG 160 170 180 190 200 210 370 380 390 400 410 SRAAFP CCTTG---AATGCTGGTGTTGT------ATGGATCGGAGGCTCCGCTTGCCTCCAGGCAG :: : ::: : : : :::::: :::::: : : ::::: :: DQ0624 AGCTGACAAGTGCAGACTTAATCCCATCATGGATTGGAGGCACAGGTTGCCAAATATCAA 220 230 240 250 260 270 420 430 440 450 460 470 SRAAFP GTGCTTGGACCTGGTCTGATGGTACACCTATGAATTTTCGTTCCTGGTGTTCTACCAAAC :::: ::: ::: : ::: :::: ::: : : :::::: :: : ::: DQ0624 CCCGTTGGTTTTGGATGGATAGCACAAGTATGGATTATGCTGACTGGTGCGCTGCACAAC 280 290 300 310 320 330 480 490 500 510 520 530 SRAAFP CTGATGATGTACTGGCCGCGTGCTGTATGCAGATGACTGCTGCAGCTGACCAATGCTGGG ::::: : : : : :::::: :: ::::::: :: :: : :: :::::::: DQ0624 CTGATACTACCTTAACTGAGTGCTGCATACAGATGAATGTTGGAATTGGAAAATGCTGGA 340 350 360 370 380 390 540 550 560 570 580 SRAAFP ATGACTTGCCTTGTCCGGCATC-CCACAAATCAGTCTGCGCCATGACATTCTGA ::::: :::::: : ::::: :: :::: ::::::::: : :: : DQ0624 ATGACACACCTTGTAC-GCATCTTCATTCATCAATCTGCGCCAAGCCACTGAAATGATTC 400 410 420 430 440 450 DQ0624 CTGAGCTGACACAGAGGCATCCACCACCATCAATCACGT 460 470 480 490 >>DQ062446 - Clupea harengus clone 12 type II antifreeze (495 nt) initn: 762 init1: 322 opt: 338 banded Smith-Waterman score: 556; 62.1% identity (62.1% similar) in 380 nt overlap (215-584:68-446) 190 200 210 220 230 240 SRAAFP CTGGACCGGTCTCTCAGAGAGCCCCACCAAACTGTCCCGCTGGTTGGCAACCTCTTGGTG : :::::: ::: :::: : : :: DQ0624 CCATGATGGCTCTGACTAGGGCTGCTGACGAATGTCCCACTGATTGGGAGATGTTCAATG 40 50 60 70 80 90 250 260 270 280 290 300 SRAAFP ACCGCTGTATCTATTATGAGACAACAGCGATGACTTGGGCTCTGGCTGAGACAAACTGTA :::::: :: :: : : :: : :: ::::::: ::: :: :: ::::: DQ0624 GTCGCTGTTTCCTTTTTAATCCATTACAATTGCATTGGGCTGACGCTCAGGAAAGCTGTA 100 110 120 130 140 150 310 320 330 340 350 360 SRAAFP TGAAATTGGGTGGACACCTTGCATCCATCCACAGCCAGGAGGAGCATAGTTTCATTCAGA :::: ::: : : ::::::::::::: ::::::: :: ::: :: :: ::: :: DQ0624 TGAAGGAGGGGGCAAACCTTGCATCCATTCACAGCCTTGAAGAGTCTACGTTTATTAAGG 160 170 180 190 200 210 370 380 390 400 410 SRAAFP CCTTG---AATGCTGGTGTTGT------ATGGATCGGAGGCTCCGCTTGCCTCCAGGCAG :: : ::: : : : :::::: :::::: : : ::::: : :: DQ0624 AGCTGACAAGTGCAGACTTAATCCCATCATGGATTGGAGGCACAGATTGCCAAGTGTCAA 220 230 240 250 260 270 420 430 440 450 460 470 SRAAFP GTGCTTGGACCTGGTCTGATGGTACACCTATGAATTTTCGTTCCTGGTGTTCTACCAAAC :::: ::: ::: : ::: :::: ::: : : :::::: :: : : : DQ0624 CCCGTTGGTTTTGGATGGATAGCACAAGTATGGATTATGCTGACTGGTGCGCTGCACAGC 280 290 300 310 320 330 480 490 500 510 520 530 SRAAFP CTGATGATGTACTGGCCGCGTGCTGTATGCAGATGACTGCTGCAGCTGACCAATGCTGGG ::::: : : : : :::::: :: ::::::: :: :: : :: :::::::: DQ0624 CTGATACTACCTTAACTGAGTGCTGCATACAGATGAATGTTGGAATTGGAAAATGCTGGA 340 350 360 370 380 390 540 550 560 570 580 SRAAFP ATGACTTGCCTTGTCCGGCATC-CCACAAATCAGTCTGCGCCATGACATTCTGA ::::: :::: : : ::::: :: :::: ::::::::: : :: : DQ0624 ATGACACACCTTATAC-GCATCTTCATTCATCAATCTGCGCCAAGCCAGTGAAATGATTC 400 410 420 430 440 450 DQ0624 CTGAGCTGACACAGAGGCATCCACCACCGTCAATCACGT 460 470 480 490 >>FJ826539 - Perca flavescens type II antifreeze protein (859 nt) initn: 758 init1: 306 opt: 308 banded Smith-Waterman score: 475; 63.3% identity (63.3% similar) in 308 nt overlap (70-364:33-336) 40 50 60 70 80 90 SRAAFP ATTTCTACAGCAGGGCTATCAATCATCTTCATCGTCTGCACCATCTCTACCACGAGGATG :: :::::: ::::: ::::: : :::: FJ8265 AAGACCACAGGCTGAATCTGAGAAAGAAGAATTATCTGCATTATCTCCACCACCAAGATG 10 20 30 40 50 60 100 110 120 130 140 150 SRAAFP CTGACTGTGTCTCTACTGGTTTGTGCCATGATGGCTCTGACTCAAGCTAAT------GAT ::::::::::::::::: ::::::::::::::::::::: :: :::: :: ::: FJ8265 CTGACTGTGTCTCTACTCGTTTGTGCCATGATGGCTCTGGCTACAGCTGATGACGCAGAT 70 80 90 100 110 120 160 170 180 190 200 SRAAFP GACA-----AAATACTCAA--AGGCACGGCTACAGAGGCTGGACCGGTCTCTCAGAGAGC : :: : :::: : :: ::: : :: :: :: : : ::::: :: FJ8265 GTCACTTCCAGCAACTCTACCAGCAACGCTTCCAACAACTCTTCCAGCACCACAGAGGGC 130 140 150 160 170 180 210 220 230 240 250 260 SRAAFP CCCACCAAACTGTCCCGCTGGTTGGCAACCTCTTGGTGACCGCTGTATCTATTATGAGAC :: : ::::: ::: :::: ::: :::::: :: : : : FJ8265 CCTGC----TTGTCCTGCTTCTTGGACTAAGTACAATGATCGCTGTTTCCTCTTCGTTCC 190 200 210 220 230 270 280 290 300 310 320 SRAAFP AACAGCGATGACTTGGGCTCTGGCTGAGACAAACTGTATGAAATTGGGTGGACACCTTGC : :: :: ::::: : ::::::: :::::: : : : ::: ::::::: FJ8265 TAGAGGACTGGATTGGGTTGACGCTGAGAAAAACTGCCAGTCCTCGAAAGGAAACCTTGC 240 250 260 270 280 290 330 340 350 360 370 380 SRAAFP ATCCATCCACAGCCAGGAGGAGCATAGTTTCATTCAGACCTTGAATGCTGGTGTTGTATG ::: : ::::: :::::: :: :::::::::: FJ8265 ATCAGTGCACAGTGTTGAGGAGTATCAGTTCATTCAGATGATAATCAAACAACAGACTCA 300 310 320 330 340 350 390 400 410 420 430 440 SRAAFP GATCGGAGGCTCCGCTTGCCTCCAGGCAGGTGCTTGGACCTGGTCTGATGGTACACCTAT FJ8265 TGCTAATCCAATGACCTGGATTGGAGGCCAGGACGCCCTGAAGAACAATGTTTGGTTCTG 360 370 380 390 400 410 >>FJ826541 - Perca flavescens type II antifreeze protein (869 nt) initn: 784 init1: 296 opt: 299 banded Smith-Waterman score: 299; 83.5% identity (83.5% similar) in 85 nt overlap (70-154:34-118) 40 50 60 70 80 90 SRAAFP ATTTCTACAGCAGGGCTATCAATCATCTTCATCGTCTGCACCATCTCTACCACGAGGATG :: :::::: ::::: :::: : :::: FJ8265 AAGACCACAGGCTGAATCTGAGAAAGAAGAATTATCTGCATTATCTCCGCCACCAAGATG 10 20 30 40 50 60 100 110 120 130 140 150 SRAAFP CTGACTGTGTCTCTACTGGTTTGTGCCATGATGGCTCTGACTCAAGCTAATGATGACAAA ::::::::::::::::: ::::::::::::::::::::: :: :::: :::: : FJ8265 CTGACTGTGTCTCTACTCGTTTGTGCCATGATGGCTCTGGCTACAGCTGATGACGCATAT 70 80 90 100 110 120 160 170 180 190 200 210 SRAAFP ATACTCAAAGGCACGGCTACAGAGGCTGGACCGGTCTCTCAGAGAGCCCCACCAAACTGT FJ8265 GTCACTTCCAGCAACTCTTCCAGCAACGTTTCCAACAACTCTTCCAGCAACTCTTCCAGC 130 140 150 160 170 180 >>EU136173 - Lates calcarifer type II antifreeze protein (824 nt) initn: 774 init1: 290 opt: 294 banded Smith-Waterman score: 294; 69.6% identity (69.6% similar) in 135 nt overlap (243-374:237-371) 220 230 240 250 260 270 SRAAFP AAACTGTCCCGCTGGTTGGCAACCTCTTGGTGACCGCTGTATCTATTATGAGACAACAGC :: :::::: :: : : : :::::: EU1361 CTCCTGTGAAATTGGTTGGTCTGAGTTCAATGGTCGCTGTTTCCTGTTCGTGTCAACAGA 210 220 230 240 250 260 280 290 300 310 320 330 SRAAFP GATGACTTGGGCTCTGGCTGAGACAAACTGTATGAAATTGGGTGGACACCTTGCATCCAT ::::: ::::::: ::::::: ::::::: :: : :::::::::::::: : EU1361 GATGAGTTGGGCTGATGCTGAGAAAAACTGTCTGCTCAAGAAAGGACACCTTGCATCGGT 270 280 290 300 310 320 340 350 360 370 380 SRAAFP CCACAGCCAGGAGGAGCATAGTTTCATTCAGAC---CTTGAATGCTGGTGTTGTATGGAT ::::: : :::::::: : : ::::::: : ::::::: EU1361 CCACAACGAGGAGGAGTACAAACACATTCAGGCTGTGGTGAATGCACACACCGGAGGTCA 330 340 350 360 370 380 390 400 410 420 430 440 SRAAFP CGGAGGCTCCGCTTGCCTCCAGGCAGGTGCTTGGACCTGGTCTGATGGTACACCTATGAA EU1361 TCCAACAACATGGGTTGGAGGCTCTGACTGTCAAAAGGAGGGTATCTGGCTCTGGAGTGA 390 400 410 420 430 440 >>DQ003023 - Clupea harengus type II antifreeze protein (1811 nt) initn: 828 init1: 271 opt: 279 banded Smith-Waterman score: 279; 78.9% identity (78.9% similar) in 90 nt overlap (65-154:156-245) 40 50 60 70 80 90 SRAAFP AAGATATTTCTACAGCAGGGCTATCAATCATCTTCATCGTCTGCACCATCTCTACCACGA :: ::: ::: :::::: :: :: : DQ0030 ATTTCTCACTCTGTATTTTCTTGTTGAAGGTCATCAAGGTCAAAGTCATCTCCACTACCA 130 140 150 160 170 180 100 110 120 130 140 150 SRAAFP GGATGCTGACTGTGTCTCTACTGGTTTGTGCCATGATGGCTCTGACTCAAGCTAATGATG :::::::::::::::::::::: ::::::::::: ::::::::::: : ::: ::: : DQ0030 GGATGCTGACTGTGTCTCTACTCGTTTGTGCCATCGTGGCTCTGACTAAGGCTGCTGACG 190 200 210 220 230 240 160 170 180 190 200 210 SRAAFP ACAAAATACTCAAAGGCACGGCTACAGAGGCTGGACCGGTCTCTCAGAGAGCCCCACCAA DQ0030 GTGAGTATCAGTCTGGAGAAATGCATTTTGTGTAGTTGTAAGCAACTTTATTCAAACACT 250 260 270 280 290 300 >>GU165767 - Paralichthys olivaceus serum lectin isoform (663 nt) initn: 321 init1: 242 opt: 261 banded Smith-Waterman score: 261; 64.8% identity (64.8% similar) in 162 nt overlap (213-369:168-324) 190 200 210 220 230 SRAAFP GGCTGGACCGGTCTCTCAGAGAGCCCCACCAAACTGTCCC----GCTGGTT-GGCAACCT :::::::::: :::::: :: :: GU1657 AGATGGACCTGAGGTCAAGCTGCAGCGTGGAAACTGTCCCATGTTCTGGTTCAGCTACAA 140 150 160 170 180 190 240 250 260 270 280 290 SRAAFP CTTGGTGACCGCTGTATCTATTATGAGACAACAGCGATGACTTGGGCTCTGGCTGAGACA : ::::::: : : :: : : : ::: ::::: ::::::: :: ::: GU1657 C-----AACCGCTGCTACAAGTACGTGGCCACACAAATGACCTGGGCTCAAGCAGAGCTC 200 210 220 230 240 250 300 310 320 330 340 350 SRAAFP AACTGTATGAAATTGGGTGGACACCTTGCATCCATCCACAGCCAGGAGGAGCATAGTTTC :::::: :: : ::: : :::: : ::::::::::: : :: ::: :: : :::: GU1657 AACTGTGTGTCACAGGGAGCCAACCTGGTGTCCATCCACAGTCTGGGGGAACAGAATTTC 260 270 280 290 300 310 360 370 380 390 400 410 SRAAFP ATTCAGACCTTGAATGCTGGTGTTGTATGGATCGGAGGCTCCGCTTGCCTCCAGGCAGGT :: : ::: :: GU1657 ATCAAAACCCTGGTCAGCAACTTTGACCCTTCTGAGGGAATCACCTGGATCGGACTCAGC 320 330 340 350 360 370 >>AB220917 - Verasper variegatus VVL-2 mRNA for serum le (669 nt) initn: 304 init1: 225 opt: 234 banded Smith-Waterman score: 234; 63.0% identity (63.0% similar) in 162 nt overlap (213-370:164-321) 190 200 210 220 230 SRAAFP GGCTGGACCGGTCTCTCAGAGAGCCCCACCAAACTGTCCC----GCTGGTTGGCAACCTC :::::::::: :::::: :: : :: AB2209 AGATGGACCTGAGCTCCAGCTGCAGCGTGGAAACTGTCCCATGTTCTGGTT--CAGCTTC 140 150 160 170 180 190 240 250 260 270 280 290 SRAAFP TTGGTGACCGCTGTATCTATTATGAGACAACAGCGATGACTTGGGCTCTGGCTGAGACAA ::::::: : : :: : : : ::: ::::: :::::: :: ::: AB2209 --AACAACCGCTGCTACAAGTACGTGGCCACACAGATGAACTGGGCTGATGCAGAGCTCC 200 210 220 230 240 300 310 320 330 340 350 SRAAFP ACTGTATGAAATTGGGTGGACACCTTGCATCCATCCACAGCCAGGAGGAGCATAGTTTCA ::::: :: : ::: : :::: : :: :::::::: : ::: :: :::: :: : AB2209 ACTGTGTGTCAGAGGGAGCCAACCTGGTGTCTATCCACAGTCTGGATGAACATAATTACG 250 260 270 280 290 300 360 370 380 390 400 410 SRAAFP TTCAGACCTTGAATGCTGGTGTTGTATGGATCGGAGGCTCCGCTTGCCTCCAGGCAGGTG : :: :: ::: AB2209 TCCAATCCCTGATCAAGAGCGTTGATCTTGAAGGAGGAAGAACCTGGATCGGACTCACCG 310 320 330 340 350 360 588 residues in 1 query sequences 2460200059 residues in 663747 library sequences Scomplib [35.04] start: Sat Jul 31 17:34:41 2010 done: Sat Jul 31 17:42:18 2010 Total Scan time: 398.400 Total Display time: 0.010 Function used was FASTA [version 35.04 Feb. 20, 2010]