TBLASTX 2.0.10 [Aug-26-1999] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|1348853|gb|G26621|G26621 human STS STS_D12006.gi|1396339|gb|G27620|G27620 human STS SHGC-32705. (615 letters) Database: data/sts 87,792 sequences; 31,998,854 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|1348853|gb|G26621|G26621 human STS STS_D12006. >gi|1396339|g... 398 e-111 gi|1348016|gb|G25784|G25784 human STS EST47998. 302 1e-82 gi|3403105|gb|G41148|G41148 Z7324 Zebrafish AB Danio rerio STS ... 31 0.60 gi|1234967|emb|Z53521|HSB316XA9 H.sapiens (D22S1166) DNA segmen... 30 0.83 gi|4185670|gb|G42865|G42865 Xq3845 KWOK Homo sapiens STS genomi... 30 1.1 gi|4757419|gb|G49246.1|G49246 stbK116F5_30376 chromosome 22 gen... 29 1.6 gi|6120694|gb|G55375.1|G55375 SHGC-100697 Human Homo sapiens ST... 29 3.0 gi|5225124|gb|G53947.1|G53947 SHGC-85304 Human Homo sapiens STS... 29 3.0 gi|1311530|gb|L77996|HUMSWX945 Human chromosome X STS sWXD945, ... 28 4.1 gi|2734624|gb|G36957|G36957 SHGC-56642 Human Homo sapiens STS cDNA 28 4.1 gi|4631600|dbj|AU046965.1|AU046965 Rattus norvegicus, OTSUKA cl... 28 4.1 gi|4631518|dbj|AU046883.1|AU046883 Rattus norvegicus, OTSUKA cl... 28 4.1 gi|2226478|gb|G33174|G33174 human STS SHGC-6097 clone pG-2470 28 4.1 gi|938611|gb|G08061|G08061 human STS CHLC.GGAA7E02.P7438 clone ... 27 7.7 gi|307789|gb|L18105|HUMUT1736 Human STS UT1736. 27 7.7 gi|859804|gb|G06559|G06559 human STS WI-7401. 27 7.7 gi|4493143|gb|G46852.1|G46852 Z14841_1 Zebrafish AB Danio rerio... 27 7.7 gi|4492122|gb|G45831.1|G45831 Z4588_1 Zebrafish AB Danio rerio ... 27 7.7 gi|6121804|gb|G56635.1|G56635 SHGC-102032 Human Homo sapiens ST... 27 7.7 >gi|1348853|gb|G26621|G26621 human STS STS_D12006. >gi|1396339|gb|G27620|G27620 human STS SHGC-32705. Length = 615 Score = 367 bits (796), Expect = e-102 Identities = 192/200 (96%), Positives = 192/200 (96%) Frame = +2 / +2 Query: 2 IRMPLHS*DSSFCPL*QEKWECMXXXXXXXXRPKRCLQPHPLNWP*LGLNALMQNPLTKA 181 IRMPLHS*DSSFCPL*QEKWECM RPKRCLQPHPLNWP*LGLNALMQNPLTKA Sbjct: 2 IRMPLHS*DSSFCPL*QEKWECMQSSQKKQKRPKRCLQPHPLNWP*LGLNALMQNPLTKA 181 Query: 182 HRLFQTSIVFYVTCFTASSQQLLTTAQFSPLQPLFWWTNNLGTPNPGRKNIQHYEXALX* 361 HRLFQTSIVFYVTCFTASSQQLLTTAQFSPLQPLFWWTNNLGTPNPGRKNIQHYE AL * Sbjct: 182 HRLFQTSIVFYVTCFTASSQQLLTTAQFSPLQPLFWWTNNLGTPNPGRKNIQHYEXALX* 361 Query: 362 S*NGFPKLVTHGPGXVXLXLXGLSSFQEFXSTVANPWGX*XXXXXXXXXFXXGXRXXXLX 541 S*NGFPKLVTHGPG V L L GLSSFQEF STVANPWG * F G R L Sbjct: 362 S*NGFPKLVTHGPGXVXLXLXGLSSFQEFXSTVANPWGX*XXXXXXXXXFXXGXRXXXLX 541 Query: 542 XXXGGCXXVXXVXXXWXXXF 601 GGC V V W F Sbjct: 542 XXXGGCXXVXXVXXXWXXXF 601 Score = 350 bits (759), Expect = 3e-97 Identities = 195/205 (95%), Positives = 195/205 (95%) Frame = +1 / +1 Query: 1 DQNAPPLMRLFILSTLTGKVGMYAELSKETKKAKTVPSATSSELALTWTKCTNAKSLDKS 180 DQNAPPLMRLFILSTLTGKVGMYAELSKETKKAKTVPSATSSELALTWTKCTNAKSLDKS Sbjct: 1 DQNAPPLMRLFILSTLTGKVGMYAELSKETKKAKTVPSATSSELALTWTKCTNAKSLDKS 180 Query: 181 A*VISNQHCFLCNLFYRIFSAASDHCSIFSFTAIVLVDK*PRYSKSWQEKYTAL*XSTXV 360 A*VISNQHCFLCNLFYRIFSAASDHCSIFSFTAIVLVDK*PRYSKSWQEKYTAL* ST V Sbjct: 181 A*VISNQHCFLCNLFYRIFSAASDHCSIFSFTAIVLVDK*PRYSKSWQEKYTAL*XSTXV 360 Query: 361 ILKWISKAGYTWPWXXXIXFXXAFFXXXXXXXXXXXXXXLXGXVX*XXXXSXGPXXXXVX 540 ILKWISKAGYTWPW I F AFF L G V * S GP V Sbjct: 361 ILKWISKAGYTWPWXXXIXFXXAFFXSGVXVNGGKSXGXLXGXVX*XXXXSXGPXXXXVX 540 Query: 541 XPXGWVXXGXFXFXXXXXXFXXXLG 615 P GWV G F F F LG Sbjct: 541 XPXGWVXXGXFXFXXXXXXFXXXLG 615 Score = 180 bits (387), Expect(2) = 9e-91 Identities = 74/74 (100%), Positives = 74/74 (100%) Frame = +3 / +3 Query: 3 SECPSTHETLHFVHFDRKSGNVCRALKRNKKGQNGAFSHIL*IGPDLD*MH*CKIP*QKR 182 SECPSTHETLHFVHFDRKSGNVCRALKRNKKGQNGAFSHIL*IGPDLD*MH*CKIP*QKR Sbjct: 3 SECPSTHETLHFVHFDRKSGNVCRALKRNKKGQNGAFSHIL*IGPDLD*MH*CKIP*QKR 182 Query: 183 IGYFKPALFFM*PV 224 IGYFKPALFFM*PV Sbjct: 183 IGYFKPALFFM*PV 224 Score = 171 bits (368), Expect(2) = 9e-91 Identities = 114/114 (100%), Positives = 114/114 (100%) Frame = +3 / +3 Query: 273 YSHCSGGQIT*VLQILAGKIYSIMXQHSXNPKMDFQSWLHMALXXSY*XXXGFLXFRSXG 452 YSHCSGGQIT*VLQILAGKIYSIM QHS NPKMDFQSWLHMAL SY* GFL FRS G Sbjct: 273 YSHCSGGQIT*VLQILAGKIYSIMXQHSXNPKMDFQSWLHMALXXSY*XXXGFLXFRSXG 452 Query: 453 QRWQIXGVXXWXGXLXXXXFXGAXGGXGXXSXXVGAXGXXXFXXXGXXXXXXXW 614 QRWQI GV W G L F GA GG G S VGA G F G W Sbjct: 453 QRWQIXGVXXWXGXLXXXXFXGAXGGXGXXSXXVGAXGXXXFXXXGXXXXXXXW 614 Score = 398 bits (864), Expect = e-111 Identities = 205/205 (100%), Positives = 205/205 (100%) Frame = -1 / -1 Query: 615 PKXXXKXXXXXXKTKXTXXHPPXWXXNXXXLWPXXXXXXLXNXXX*XPXGFATVDXNS*X 436 PK K KTK T HPP W N LWP L N * P GFATVD NS* Sbjct: 615 PKXXXKXXXXXXKTKXTXXHPPXWXXNXXXLWPXXXXXXLXNXXX*XPXGFATVDXNS*X 436 Query: 435 EESPXKXNXTXPGPCVTSFGNPF*DYXSAXS*CCIFFLPGFGVPRLFVHQNNGCKGEN*A 256 EESP K N T PGPCVTSFGNPF*DY SA S*CCIFFLPGFGVPRLFVHQNNGCKGEN*A Sbjct: 435 EESPXKXNXTXPGPCVTSFGNPF*DYXSAXS*CCIFFLPGFGVPRLFVHQNNGCKGEN*A 256 Query: 255 VVRSC*EDAVKQVT*KTMLV*NNLCAFVKGFCISAFSPSQGQFRGCG*RHRFGLFCFF*E 76 VVRSC*EDAVKQVT*KTMLV*NNLCAFVKGFCISAFSPSQGQFRGCG*RHRFGLFCFF*E Sbjct: 255 VVRSC*EDAVKQVT*KTMLV*NNLCAFVKGFCISAFSPSQGQFRGCG*RHRFGLFCFF*E 76 Query: 75 LCIHSHFSCQSGQNEESHEWRGILI 1 LCIHSHFSCQSGQNEESHEWRGILI Sbjct: 75 LCIHSHFSCQSGQNEESHEWRGILI 1 Score = 390 bits (846), Expect = e-109 Identities = 196/196 (100%), Positives = 196/196 (100%) Frame = -3 / -3 Query: 589 PXXXNXXNPXAPTXXXX*PXPPXAPXKXXXXXXPXXLXTPXICHR*PKLLKXRKPX*XQX 410 P N NP APT *P PP AP K P L TP ICHR*PKLLK RKP * Q Sbjct: 589 PXXXNXXNPXAPTXXXX*PXPPXAPXKXXXXXXPXXLXTPXICHR*PKLLKXRKPX*XQX 410 Query: 409 DXXRAMCNQLWKSILGLXECXFIMLYIFPARIWST*VICPPEQWL*RRKLSSGQKLLRRC 230 D RAMCNQLWKSILGL EC FIMLYIFPARIWST*VICPPEQWL*RRKLSSGQKLLRRC Sbjct: 409 DXXRAMCNQLWKSILGLXECXFIMLYIFPARIWST*VICPPEQWL*RRKLSSGQKLLRRC 230 Query: 229 GKTGYIKNNAGLK*PMRFCQGILH*CI*SKSGPIQRMWLKAPFWPFLFLLRALHTFPLFL 50 GKTGYIKNNAGLK*PMRFCQGILH*CI*SKSGPIQRMWLKAPFWPFLFLLRALHTFPLFL Sbjct: 229 GKTGYIKNNAGLK*PMRFCQGILH*CI*SKSGPIQRMWLKAPFWPFLFLLRALHTFPLFL 50 Query: 49 SKWTK*RVS*VEGHSD 2 SKWTK*RVS*VEGHSD Sbjct: 49 SKWTK*RVS*VEGHSD 2 Score = 316 bits (684), Expect = 7e-87 Identities = 146/146 (100%), Positives = 146/146 (100%) Frame = -2 / -2 Query: 440 EXKKAXXXSIXXXQGHV*PALEIHFRIT*VLXHNAVYFSCQDLEYLGYLSTRTMAVKEKI 261 E KKA SI QGHV*PALEIHFRIT*VL HNAVYFSCQDLEYLGYLSTRTMAVKEKI Sbjct: 440 EXKKAXXXSIXXXQGHV*PALEIHFRIT*VLXHNAVYFSCQDLEYLGYLSTRTMAVKEKI 261 Query: 260 EQWSEAAEKMR*NRLHKKQCWFEITYALLSRDFALVHLVQVRANSEDVAEGTVLAFFVSF 81 EQWSEAAEKMR*NRLHKKQCWFEITYALLSRDFALVHLVQVRANSEDVAEGTVLAFFVSF Sbjct: 260 EQWSEAAEKMR*NRLHKKQCWFEITYALLSRDFALVHLVQVRANSEDVAEGTVLAFFVSF 81 Query: 80 ESSAYIPTFPVKVDKMKSLMSGGAF* 3 ESSAYIPTFPVKVDKMKSLMSGGAF* Sbjct: 80 ESSAYIPTFPVKVDKMKSLMSGGAF* 3 >gi|1348016|gb|G25784|G25784 human STS EST47998. Length = 617 Score = 170 bits (366), Expect(2) = 3e-63 Identities = 71/74 (95%), Positives = 71/74 (95%) Frame = +3 / +3 Query: 3 SECPSTHETLHFVHFDRKSGNVCRALKRNKKGQNGAFSHIL*IGPDLD*MH*CKIP*QKR 182 S CPSTHETLHFVHFDRKSGNVCRALKRNKKGQNGAFSHIL*IGPDLD* *CKIP*QKR Sbjct: 3 SXCPSTHETLHFVHFDRKSGNVCRALKRNKKGQNGAFSHIL*IGPDLD*XX*CKIP*QKR 182 Query: 183 IGYFKPALFFM*PV 224 IGYFKPALFFM*PV Sbjct: 183 IGYFKPALFFM*PV 224 Score = 89.0 bits (188), Expect(2) = 3e-63 Identities = 42/67 (62%), Positives = 43/67 (63%) Frame = +3 / +3 Query: 273 YSHCSGGQIT*VLQILAGKIYSIMXQHSXNPKMDFQSWLHMALXXSY*XXXGFLXFRSXG 452 YSHCSGGQIT*VLQILAGKIYSIM QHS K FQSWLHM + F R G Sbjct: 273 YSHCSGGQIT*VLQILAGKIYSIMKQHSVILKWIFQSWLHMXCKVLFKFKRPFSFTRGLG 452 Query: 453 QRWQIXG 473 QR Q G Sbjct: 453 QRXQTPG 473 Score = 273 bits (590), Expect = 7e-74 Identities = 121/133 (90%), Positives = 121/133 (90%) Frame = +1 / +1 Query: 1 DQNAPPLMRLFILSTLTGKVGMYAELSKETKKAKTVPSATSSELALTWTKCTNAKSLDKS 180 DQ APPLMRLFILSTLTGKVGMYAELSKETKKAKTVPSATSSELALTWTK NAKSLDKS Sbjct: 1 DQXAPPLMRLFILSTLTGKVGMYAELSKETKKAKTVPSATSSELALTWTKXXNAKSLDKS 180 Query: 181 A*VISNQHCFLCNLFYRIFSAASDHCSIFSFTAIVLVDK*PRYSKSWQEKYTAL*XSTXV 360 A*VISNQHCFLCNLFYRIFSAASDHCSIFSFTAIVLVDK*PRYSKSWQEKYTAL* ST Sbjct: 181 A*VISNQHCFLCNLFYRIFSAASDHCSIFSFTAIVLVDK*PRYSKSWQEKYTAL*NSTQ* 360 Query: 361 ILKWISKAGYTWP 399 SKAGYT P Sbjct: 361 S*NGFSKAGYTXP 399 Score = 274 bits (593), Expect(2) = 8e-76 Identities = 112/131 (85%), Positives = 112/131 (85%) Frame = +2 / +2 Query: 2 IRMPLHS*DSSFCPL*QEKWECMXXXXXXXXRPKRCLQPHPLNWP*LGLNALMQNPLTKA 181 IR PLHS*DSSFCPL*QEKWECM RPKRCLQPHPLNWP*LGL LMQNPLTKA Sbjct: 2 IRXPLHS*DSSFCPL*QEKWECMQSSQKKQKRPKRCLQPHPLNWP*LGLXPLMQNPLTKA 181 Query: 182 HRLFQTSIVFYVTCFTASSQQLLTTAQFSPLQPLFWWTNNLGTPNPGRKNIQHYEXALX* 361 HRLFQTSIVFYVTCFTASSQQLLTTAQF PLQPLFWWTNNLGTPNPGRKNIQHYE AL Sbjct: 182 HRLFQTSIVFYVTCFTASSQQLLTTAQFFPLQPLFWWTNNLGTPNPGRKNIQHYETALSN 361 Query: 362 S*NGFPKLVTH 394 FPKLVTH Sbjct: 362 PKMDFPKLVTH 394 Score = 27.2 bits (53), Expect(2) = 8e-76 Identities = 9/13 (69%), Positives = 10/13 (76%) Frame = +2 / +2 Query: 437 FQEFXSTVANPWG 475 +Q F ST ANPWG Sbjct: 437 YQGFRSTXANPWG 475 Score = 302 bits (653), Expect = 1e-82 Identities = 128/157 (81%), Positives = 132/157 (83%) Frame = -3 / -2 Query: 472 PXICHR*PKLLKXRKPX*XQXDXXRAMCNQLWKSILGLXECXFIMLYIFPARIWST*VIC 293 P +C R*PK L K + MCNQLWK + EC FIMLYIFPARIWST*VIC Sbjct: 472 PGVCXR*PKPLVNEKGLLNLNKTLQXMCNQLWKIHFRITECCFIMLYIFPARIWST*VIC 293 Query: 292 PPEQWL*RRKLSSGQKLLRRCGKTGYIKNNAGLK*PMRFCQGILH*CI*SKSGPIQRMWL 113 PPEQWL*R+KLSSGQKLLRRCGKTGYIKNNAGLK*PMRFCQGILH* *SKSGPIQRMWL Sbjct: 292 PPEQWL*RKKLSSGQKLLRRCGKTGYIKNNAGLK*PMRFCQGILH*XX*SKSGPIQRMWL 113 Query: 112 KAPFWPFLFLLRALHTFPLFLSKWTK*RVS*VEGHSD 2 KAPFWPFLFLLRALHTFPLFLSKWTK*RVS*VEG SD Sbjct: 112 KAPFWPFLFLLRALHTFPLFLSKWTK*RVS*VEGXSD 2 Score = 276 bits (598), Expect = 5e-75 Identities = 122/130 (93%), Positives = 122/130 (93%) Frame = -2 / -1 Query: 398 GHV*PALEIHFRIT*VLXHNAVYFSCQDLEYLGYLSTRTMAVKEKIEQWSEAAEKMR*NR 219 GHV*PALE F *VL HNAVYFSCQDLEYLGYLSTRTMAVKEKIEQWSEAAEKMR*NR Sbjct: 398 GHV*PALENPF*DY*VLFHNAVYFSCQDLEYLGYLSTRTMAVKEKIEQWSEAAEKMR*NR 219 Query: 218 LHKKQCWFEITYALLSRDFALVHLVQVRANSEDVAEGTVLAFFVSFESSAYIPTFPVKVD 39 LHKKQCWFEITYALLSRDFAL LVQVRANSEDVAEGTVLAFFVSFESSAYIPTFPVKVD Sbjct: 218 LHKKQCWFEITYALLSRDFALXXLVQVRANSEDVAEGTVLAFFVSFESSAYIPTFPVKVD 39 Query: 38 KMKSLMSGGA 9 KMKSLMSGGA Sbjct: 38 KMKSLMSGGA 9 Score = 290 bits (628), Expect = 4e-79 Identities = 119/131 (90%), Positives = 120/131 (90%) Frame = -1 / -3 Query: 393 CVTSFGNPF*DYXSAXS*CCIFFLPGFGVPRLFVHQNNGCKGEN*AVVRSC*EDAVKQVT 214 CVTSFG SA S*CCIFFLPGFGVPRLFVHQNNGCKG+N*AVVRSC*EDAVKQVT Sbjct: 393 CVTSFGKSILGLLSAVS*CCIFFLPGFGVPRLFVHQNNGCKGKN*AVVRSC*EDAVKQVT 214 Query: 213 *KTMLV*NNLCAFVKGFCISAFSPSQGQFRGCG*RHRFGLFCFF*ELCIHSHFSCQSGQN 34 *KTMLV*NNLCAFVKGFCI FSPSQGQFRGCG*RHRFGLFCFF*ELCIHSHFSCQSGQN Sbjct: 213 *KTMLV*NNLCAFVKGFCIXGFSPSQGQFRGCG*RHRFGLFCFF*ELCIHSHFSCQSGQN 34 Query: 33 EESHEWRGILI 1 EESHEWRG LI Sbjct: 33 EESHEWRGXLI 1 >gi|3403105|gb|G41148|G41148 Z7324 Zebrafish AB Danio rerio STS genomic Length = 351 Score = 30.8 bits (61), Expect = 0.60 Identities = 11/27 (40%), Positives = 18/27 (65%) Frame = +1 / +2 Query: 211 LCNLFYRIFSAASDHCSIFSFTAIVLV 291 L NL +R+F++ DHCS+ F V++ Sbjct: 2 LTNLIFRLFTSK*DHCSLKQFNNKVVI 82 >gi|1234967|emb|Z53521|HSB316XA9 H.sapiens (D22S1166) DNA segment containing (CA) repeat; clone AFMb316xa9; single read, sequence tagged site [Homo sapiens] Length = 345 Score = 30.4 bits (60), Expect = 0.83 Identities = 10/19 (52%), Positives = 13/19 (67%) Frame = -3 / +1 Query: 316 IWST*VICPPEQWL*RRKL 260 +W T +CPP W *RR+L Sbjct: 226 LWGTAPLCPPVPWA*RRQL 282 >gi|4185670|gb|G42865|G42865 Xq3845 KWOK Homo sapiens STS genomic, sequence tagged site [Homo sapiens] Length = 1200 Score = 29.9 bits (59), Expect = 1.1 Identities = 10/24 (41%), Positives = 14/24 (57%) Frame = -3 / -2 Query: 106 PFWPFLFLLRALHTFPLFLSKWTK 35 P WP + LL +H+FP + W K Sbjct: 716 PEWPSINLLPGMHSFPRVIPCWEK 645 >gi|4757419|gb|G49246.1|G49246 stbK116F5_30376 chromosome 22 genomic clone Homo sapiens STS genomic clone 116F5, sequence tagged site Length = 375 Score = 29.5 bits (58), Expect = 1.6 Identities = 15/34 (44%), Positives = 17/34 (49%) Frame = -3 / -2 Query: 106 PFWPFLFLLRALHTFPLFLSKWTK*RVS*VEGHS 5 P W FLLR LHT P K+ V+ EG S Sbjct: 176 PGWTLRFLLRGLHTPPKAAEKFPSQGVAEPEGFS 75 >gi|6120694|gb|G55375.1|G55375 SHGC-100697 Human Homo sapiens STS genomic, sequence tagged site Length = 460 Score = 28.6 bits (56), Expect = 3.0 Identities = 9/28 (32%), Positives = 16/28 (57%) Frame = +3 / +1 Query: 15 STHETLHFVHFDRKSGNVCRALKRNKKG 98 +TH F+H +K N+C + N++G Sbjct: 82 TTHSMTVFLHVKKKLSNICIYMPENREG 165 >gi|5225124|gb|G53947.1|G53947 SHGC-85304 Human Homo sapiens STS genomic, sequence tagged site Length = 444 Score = 28.6 bits (56), Expect = 3.0 Identities = 10/24 (41%), Positives = 15/24 (61%) Frame = +1 / -2 Query: 202 HCFLCNLFYRIFSAASDHCSIFSF 273 HC L ++F RIF + S+F+F Sbjct: 443 HCHLSSVFCRIFFTLEESLSLFAF 372 >gi|1311530|gb|L77996|HUMSWX945 Human chromosome X STS sWXD945, single read. Length = 196 Score = 28.1 bits (55), Expect = 4.1 Identities = 9/33 (27%), Positives = 19/33 (57%) Frame = +3 / -2 Query: 24 ETLHFVHFDRKSGNVCRALKRNKKGQNGAFSHI 122 E +H+V F + G + + ++ ++ QN SH+ Sbjct: 141 EKIHYVLF*KNCGKIMTS*RQRQENQNNLLSHV 43 >gi|2734624|gb|G36957|G36957 SHGC-56642 Human Homo sapiens STS cDNA Length = 466 Score = 28.1 bits (55), Expect = 4.1 Identities = 10/15 (66%), Positives = 11/15 (72%) Frame = -3 / -3 Query: 115 LKAPFWPFLFLLRAL 71 L PFW FLF L+AL Sbjct: 242 LSVPFWKFLFYLQAL 198 >gi|4631600|dbj|AU046965.1|AU046965 Rattus norvegicus, OTSUKA clone, 108a02, microsatellite sequence, sequence tagged site Length = 330 Score = 28.1 bits (55), Expect = 4.1 Identities = 12/39 (30%), Positives = 19/39 (47%) Frame = +2 / -3 Query: 167 PLTKAHRLFQTSIVFYVTCFTASSQQLLTTAQFSPLQPL 283 PL RLF + + ++ C T L + F P++PL Sbjct: 211 PLKTQGRLFYSKVSLFLKCRTTLCLFLNVSEGFXPIEPL 95 >gi|4631518|dbj|AU046883.1|AU046883 Rattus norvegicus, OTSUKA clone, 085f03, microsatellite sequence, sequence tagged site Length = 351 Score = 28.1 bits (55), Expect = 4.1 Identities = 8/26 (30%), Positives = 15/26 (56%) Frame = +1 / +3 Query: 205 CFLCNLFYRIFSAASDHCSIFSFTAI 282 CF+C L +I+ A + + FT++ Sbjct: 249 CFICKLVLKIYLRAEERTQLIEFTSL 326 >gi|2226478|gb|G33174|G33174 human STS SHGC-6097 clone pG-2470 Length = 299 Score = 28.1 bits (55), Expect = 4.1 Identities = 13/38 (34%), Positives = 19/38 (49%) Frame = +1 / +2 Query: 175 KSA*VISNQHCFLCNLFYRIFSAASDHCSIFSFTAIVL 288 +SA +I HC + +FS ASD S T ++L Sbjct: 119 QSAWIIGMSHCAWAVIHCLLFSTASDEKSAVDLTGVLL 232 >gi|938611|gb|G08061|G08061 human STS CHLC.GGAA7E02.P7438 clone GGAA7E02 Length = 338 Score = 27.2 bits (53), Expect = 7.7 Identities = 12/24 (50%), Positives = 13/24 (54%) Frame = -3 / +3 Query: 118 WLKAPFWPFLFLLRALHTFPLFLS 47 WL PF PFL L +L P LS Sbjct: 153 WLLFPFLPFLPFLPSLPFLPFLLS 224 >gi|307789|gb|L18105|HUMUT1736 Human STS UT1736. Length = 355 Score = 27.2 bits (53), Expect = 7.7 Identities = 12/24 (50%), Positives = 13/24 (54%) Frame = -3 / -1 Query: 118 WLKAPFWPFLFLLRALHTFPLFLS 47 WL PF PFL L +L P LS Sbjct: 235 WLLFPFLPFLPFLPSLPFLPFLLS 164 >gi|859804|gb|G06559|G06559 human STS WI-7401. Length = 3280 Score = 27.2 bits (53), Expect = 7.7 Identities = 9/21 (42%), Positives = 13/21 (61%) Frame = -1 / -1 Query: 339 CCIFFLPGFGVPRLFVHQNNG 277 C IF++P F LF+H+ G Sbjct: 1396 CFIFYVPDFPWSNLFLHRGRG 1334 >gi|4493143|gb|G46852.1|G46852 Z14841_1 Zebrafish AB Danio rerio STS genomic clone Z14841 5', sequence tagged site Length = 291 Score = 27.2 bits (53), Expect = 7.7 Identities = 8/20 (40%), Positives = 13/20 (65%) Frame = -3 / +1 Query: 388 NQLWKSILGLXECXFIMLYI 329 NQ+WK L + C F+ +Y+ Sbjct: 37 NQMWKHSLEVCMCVFVYIYV 96 >gi|4492122|gb|G45831.1|G45831 Z4588_1 Zebrafish AB Danio rerio STS genomic clone Z4588 5', sequence tagged site Length = 398 Score = 27.2 bits (53), Expect = 7.7 Identities = 7/22 (31%), Positives = 13/22 (58%) Frame = +1 / +1 Query: 205 CFLCNLFYRIFSAASDHCSIFS 270 CF + +R+F+ HC+ F+ Sbjct: 13 CFALTVIWRVFAGCRPHCATFT 78 >gi|6121804|gb|G56635.1|G56635 SHGC-102032 Human Homo sapiens STS genomic, sequence tagged site Length = 541 Score = 27.2 bits (53), Expect = 7.7 Identities = 9/20 (45%), Positives = 13/20 (65%) Frame = -1 / +2 Query: 174 VKGFCISAFSPSQGQFRGCG 115 V GFC+++FSP + G G Sbjct: 125 VDGFCVTSFSPKKDTHPGSG 184 Database: data/sts Posted date: Nov 26, 1999 5:52 PM Number of letters in database: 31,998,854 Number of sequences in database: 87,792 Lambda K H 0.318 0.135 0.401 Matrix: BLOSUM62 Number of Hits to DB: 40473548 Number of Sequences: 87792 Number of extensions: 487631 Number of successful extensions: 13175 Number of sequences better than 10.0: 38 length of query: 205 length of database: 10,666,284 effective HSP length: 46 effective length of query: 158 effective length of database: 6,627,852 effective search space: 1047200616 effective search space used: 1047200616 frameshift window, decay const: 50, 0.1 T: 13 A: 40 X1: 16 ( 7.3 bits) X2: 0 ( 0.0 bits) S1: 41 (21.7 bits) S2: 52 (26.7 bits)