BLASTP 2.0.11 [Jan-20-2000]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|400206|sp|Q02112|LYTA_BACSU MEMBRANE-BOUND PROTEIN LYTA
PRECURSOR
         (102 letters)

Database: data/pdbaa
           6999 sequences; 1,461,753 total letters

Searching..................................................done

 ***** No hits found ******

  Database: data/pdbaa
    Posted date:  Feb 11, 2000  2:32 PM
  Number of letters in database: 1,461,753
  Number of sequences in database:  6999
  
Lambda     K      H
   0.302    0.126    0.332 

Gapped
Lambda     K      H
   0.270   0.0470    0.230 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 270485
Number of Sequences: 6999
Number of extensions: 9861
Number of successful extensions: 7
Number of sequences better than 10.0: 0
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 7
Number of HSP's gapped (non-prelim): 0
length of query: 102
length of database: 1,461,753
effective HSP length: 47
effective length of query: 55
effective length of database: 1,132,800
effective search space: 62304000
effective search space used: 62304000
T: 11
A: 40
X1: 17 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 43 (21.7 bits)
S2: 47 (22.7 bits)