BLASTN 2.0.11 [Jan-20-2000]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|1348400|gb|G26168|G26168 human STS
EST47274.
gi|1375380|gb|G27130|G27130 human STS SHGC-32751.
         (434 letters)

Database: data/sts
           87,792 sequences; 31,998,854 total letters

Searching...................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gi|1348400|gb|G26168|G26168 human STS EST47274. >gi|1375380|gb|...   718  0.0
gi|4632200|dbj|AU047565.1|AU047565 Rattus norvegicus, OTSUKA cl...    34  0.65
gi|6121436|gb|G56117.1|G56117 SHGC-101583 Human Homo sapiens ST...    34  0.65
gi|3249175|gb|G38401|G38401 SHGC-57345 Human Homo sapiens STS g...    34  0.65
gi|720383|gb|G03425|G03425 human STS WI-5868.                         34  0.65
gi|605557|gb|L31312|HUMUT937B Human STS UT937, 3' primer bind.        34  0.65
gi|6123581|gb|G58262.1|G58262 SHGC-104352 Human Homo sapiens ST...    32  2.6
gi|6122805|gb|G57486.1|G57486 SHGC-103345 Human Homo sapiens ST...    32  2.6
gi|6121347|gb|G56178.1|G56178 SHGC-101470 Human Homo sapiens ST...    32  2.6
gi|3893806|emb|AL034156|HSPE59A01 H.sapiens flow-sorted chromos...    32  2.6
gi|5224295|gb|G52968.1|G52968 SHGC-86325 Human Homo sapiens STS...    32  2.6
gi|1348143|gb|G25911|G25911 human STS EST349382.                      32  2.6
gi|1233216|emb|Z51916|HSA082WB5 H.sapiens (D1S2890) DNA segment...    32  2.6
gi|1232198|emb|Z50898|HS038XD8 H.sapiens (D18S1106) DNA segment...    32  2.6
gi|1161890|gb|G16001|G16001 human STS CHLC.GCT8D08.P11278 clone...    32  2.6
gi|1130137|gb|G14398|G14398 human STS SHGC-9310 clone pG-5191.        32  2.6
gi|1017612|gb|G11520|G11520 human STS SHGC-14676.                     32  2.6
gi|1396897|gb|G28178|G28178 human STS SHGC-34170.                     32  2.6
gi|859592|gb|G06347|G06347 human STS WI-7005.                         32  2.6

  Database: data/sts
    Posted date:  Feb 11, 2000  2:37 PM
  Number of letters in database: 31,998,854
  Number of sequences in database:  87,792
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8762
Number of Sequences: 87792
Number of extensions: 8762
Number of successful extensions: 2655
Number of sequences better than 10.0: 27
length of query: 434
length of database: 31,998,854
effective HSP length: 17
effective length of query: 417
effective length of database: 30,506,390
effective search space: 12721164630
effective search space used: 12721164630
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 10 (19.8 bits)
S1: 12 (24.3 bits)
S2: 16 (32.2 bits)