>ref|XM_195248.1| Mus musculus similar to putative polyubiquitin (UBQ10) [Arabidopsis
thaliana] (LOC270670), mRNA
Length = 285
Score = 565 bits (285), Expect = e-158
Identities = 285/285 (100%)
Strand = Plus / Plus
Query: 1 atgggcattttgaaggcaagagcagacatgttggaaaaggaatctggaggcacctgggtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgggcattttgaaggcaagagcagacatgttggaaaaggaatctggaggcacctgggtc 60
Query: 61 aaaatgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaaatgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagccc 120
Query: 121 agtgaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatccccccgacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agtgaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatccccccgacc 180
Query: 181 agcagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agcagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattaca 240
Query: 241 acatccagaaagagtcgaccctgcacctggtcctctggctattaa 285
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 acatccagaaagagtcgaccctgcacctggtcctctggctattaa 285
>ref|NM_138895.1| Rattus norvegicus polyubiquitin (Loc192255), mRNA
Length = 1115
Score = 333 bits (168), Expect = 8e-89
Identities = 208/220 (94%), Gaps = 1/220 (0%)
Strand = Plus / Plus
Query: 57 ggtcaaaatgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatgga 116
|||||||||||||||||||| |||||||||||| ||||||||||||||||||||| ||||
Sbjct: 57 ggtcaaaatgcaaatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtgga 116
Query: 117 gcccagtgaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc 176
||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 117 gcccagtgacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccc 176
Query: 177 -gaccagcagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctga 235
||||||||||||||||||||||| |||||||| |||||||||||| ||||| |||||||
Sbjct: 177 tgaccagcagaggctcatctttgccggcaagcagctggaagatggccgcaccctctctga 236
Query: 236 ttacaacatccagaaagagtcgaccctgcacctggtcctc 275
|||||||||||||||||||| ||||||||||||||||||
Sbjct: 237 ctacaacatccagaaagagtcaaccctgcacctggtcctc 276
Score = 311 bits (157), Expect = 3e-82
Identities = 200/213 (93%), Gaps = 1/213 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||| ||||||||||||||||| ||| |||||||||||
Sbjct: 748 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 807
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
|| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 808 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 867
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
||||||||||||||||| |||||||| |||||||||||| ||||| ||||||||||||||
Sbjct: 868 cagaggctcatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 927
Query: 243 atccagaaagagtcgaccctgcacctggtcctc 275
|||||||||||||| ||||||||||||||||||
Sbjct: 928 atccagaaagagtcaaccctgcacctggtcctc 960
Score = 311 bits (157), Expect = 3e-82
Identities = 200/213 (93%), Gaps = 1/213 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||| ||||||||||||||||||||| |||||||||||
Sbjct: 520 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtggagcccagt 579
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
|| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 580 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 639
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
||||||||||||||||| |||||||| |||||||||||| ||||| ||||||||||||||
Sbjct: 640 cagaggctcatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 699
Query: 243 atccagaaagagtcgaccctgcacctggtcctc 275
|||||||| ||||| ||||||||||||||||||
Sbjct: 700 atccagaaggagtcaaccctgcacctggtcctc 732
Score = 303 bits (153), Expect = 7e-80
Identities = 199/213 (93%), Gaps = 1/213 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||| ||||||||||||||||| ||| |||||||||||
Sbjct: 292 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 351
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
|| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 352 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 411
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
||||||||||||||||| |||||||| |||||||||||| ||||| ||||||||||||||
Sbjct: 412 cagaggctcatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 471
Query: 243 atccagaaagagtcgaccctgcacctggtcctc 275
|||||||||||||| ||||||||||| ||||||
Sbjct: 472 atccagaaagagtcaaccctgcaccttgtcctc 504
>dbj|D16554.1|RATPOLYU Rat mRNA for polyubiquitin (four repetitive ubiquitins in tandem),
complete cds
Length = 1115
Score = 333 bits (168), Expect = 8e-89
Identities = 208/220 (94%), Gaps = 1/220 (0%)
Strand = Plus / Plus
Query: 57 ggtcaaaatgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatgga 116
|||||||||||||||||||| |||||||||||| ||||||||||||||||||||| ||||
Sbjct: 57 ggtcaaaatgcaaatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtgga 116
Query: 117 gcccagtgaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc 176
||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 117 gcccagtgacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccc 176
Query: 177 -gaccagcagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctga 235
||||||||||||||||||||||| |||||||| |||||||||||| ||||| |||||||
Sbjct: 177 tgaccagcagaggctcatctttgccggcaagcagctggaagatggccgcaccctctctga 236
Query: 236 ttacaacatccagaaagagtcgaccctgcacctggtcctc 275
|||||||||||||||||||| ||||||||||||||||||
Sbjct: 237 ctacaacatccagaaagagtcaaccctgcacctggtcctc 276
Score = 311 bits (157), Expect = 3e-82
Identities = 200/213 (93%), Gaps = 1/213 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||| ||||||||||||||||| ||| |||||||||||
Sbjct: 748 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 807
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
|| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 808 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 867
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
||||||||||||||||| |||||||| |||||||||||| ||||| ||||||||||||||
Sbjct: 868 cagaggctcatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 927
Query: 243 atccagaaagagtcgaccctgcacctggtcctc 275
|||||||||||||| ||||||||||||||||||
Sbjct: 928 atccagaaagagtcaaccctgcacctggtcctc 960
Score = 311 bits (157), Expect = 3e-82
Identities = 200/213 (93%), Gaps = 1/213 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||| ||||||||||||||||||||| |||||||||||
Sbjct: 520 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtggagcccagt 579
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
|| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 580 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 639
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
||||||||||||||||| |||||||| |||||||||||| ||||| ||||||||||||||
Sbjct: 640 cagaggctcatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 699
Query: 243 atccagaaagagtcgaccctgcacctggtcctc 275
|||||||| ||||| ||||||||||||||||||
Sbjct: 700 atccagaaggagtcaaccctgcacctggtcctc 732
Score = 303 bits (153), Expect = 7e-80
Identities = 199/213 (93%), Gaps = 1/213 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||| ||||||||||||||||| ||| |||||||||||
Sbjct: 292 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 351
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
|| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 352 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 411
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
||||||||||||||||| |||||||| |||||||||||| ||||| ||||||||||||||
Sbjct: 412 cagaggctcatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 471
Query: 243 atccagaaagagtcgaccctgcacctggtcctc 275
|||||||||||||| ||||||||||| ||||||
Sbjct: 472 atccagaaagagtcaaccctgcaccttgtcctc 504
>gb|BC019850.1| Mus musculus, ubiquitin B, clone MGC:29922 IMAGE:5123849, mRNA,
complete cds
Length = 1146
Score = 325 bits (164), Expect = 2e-86
Identities = 207/220 (94%), Gaps = 1/220 (0%)
Strand = Plus / Plus
Query: 57 ggtcaaaatgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatgga 116
|||||||||||| ||||||| |||||||||||| ||||||||||||||||||||| ||||
Sbjct: 61 ggtcaaaatgcagatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtgga 120
Query: 117 gcccagtgaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc 176
||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcccagtgacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccc 180
Query: 177 -gaccagcagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctga 235
|||||||||||||| |||||||| |||||||| |||||||||||| ||||| |||||||
Sbjct: 181 tgaccagcagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctga 240
Query: 236 ttacaacatccagaaagagtcgaccctgcacctggtcctc 275
||||||||||||||||||||| ||||||||||||||||||
Sbjct: 241 ttacaacatccagaaagagtcaaccctgcacctggtcctc 280
Score = 311 bits (157), Expect = 3e-82
Identities = 200/213 (93%), Gaps = 1/213 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||| ||||||||||||||||| ||| |||||||||||
Sbjct: 752 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 811
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
|| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 812 gacaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccctgaccag 871
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
|||||||| |||||||| |||||||| |||||||||||| |||| ||||||||||||||
Sbjct: 872 cagaggctgatctttgccggcaagcagctggaagatggccgcactctctctgattacaac 931
Query: 243 atccagaaagagtcgaccctgcacctggtcctc 275
|||||||||||||||||||||||||||||||||
Sbjct: 932 atccagaaagagtcgaccctgcacctggtcctc 964
Score = 301 bits (152), Expect = 3e-79
Identities = 198/212 (93%), Gaps = 1/212 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 524 atgcagatcttcgtgaagaccctgactggcaagaccatcaccctggaggtggagcccagt 583
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
|| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 584 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 643
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
|||||||| |||||||| |||||||| |||||||||||| ||||| ||||||||||||||
Sbjct: 644 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 703
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
|||||||| ||||| |||||||||||||||||
Sbjct: 704 atccagaaggagtcaaccctgcacctggtcct 735
Score = 295 bits (149), Expect = 2e-77
Identities = 198/213 (92%), Gaps = 1/213 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||| ||||||||||||||||| ||| |||||||||||
Sbjct: 296 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 355
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
|| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 356 gacaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccctgaccag 415
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
|| ||||| |||||||| |||||||| |||||||||||| ||||| ||||||||||||||
Sbjct: 416 cataggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 475
Query: 243 atccagaaagagtcgaccctgcacctggtcctc 275
|||||||| ||||| ||||||||||||||||||
Sbjct: 476 atccagaaggagtcaaccctgcacctggtcctc 508
>ref|NM_011664.1| Mus musculus ubiquitin B (Ubb), mRNA
Length = 1172
Score = 315 bits (159), Expect = 2e-83
Identities = 205/219 (93%), Gaps = 1/219 (0%)
Strand = Plus / Plus
Query: 57 ggtcaaaatgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatgga 116
|||||||||||| ||||||| |||||||||||| ||||||||||||||||||||| ||||
Sbjct: 98 ggtcaaaatgcagatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtgga 157
Query: 117 gcccagtgaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc 176
||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 158 gcccagtgacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccc 217
Query: 177 -gaccagcagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctga 235
|||||||||||||| |||||||| |||||||| |||||||||||| ||||| |||||||
Sbjct: 218 tgaccagcagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctga 277
Query: 236 ttacaacatccagaaagagtcgaccctgcacctggtcct 274
||||||||||||||| ||||| |||||||||||||||||
Sbjct: 278 ttacaacatccagaaggagtcaaccctgcacctggtcct 316
Score = 303 bits (153), Expect = 7e-80
Identities = 199/213 (93%), Gaps = 1/213 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||| ||||||||||||||||| ||| |||||||||||
Sbjct: 333 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 392
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
|| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 393 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 452
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
|||||||| |||||||| |||||||| |||||||||||| ||||| ||||||||||||||
Sbjct: 453 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 512
Query: 243 atccagaaagagtcgaccctgcacctggtcctc 275
|||||||||||||| ||||||||||||||||||
Sbjct: 513 atccagaaagagtcaaccctgcacctggtcctc 545
Score = 295 bits (149), Expect = 2e-77
Identities = 198/213 (92%), Gaps = 1/213 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||| ||||||||||||||| | ||| |||||||||||
Sbjct: 789 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccttggaggtggagcccagt 848
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
|| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 849 gacaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccctgaccag 908
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
|||||||| |||||||| |||||||| || ||||||||| |||| ||||||||||||||
Sbjct: 909 cagaggctgatctttgccggcaagcagctagaagatggccgcactctctctgattacaac 968
Query: 243 atccagaaagagtcgaccctgcacctggtcctc 275
|||||||||||||||||||||||||||||||||
Sbjct: 969 atccagaaagagtcgaccctgcacctggtcctc 1001
Score = 293 bits (148), Expect = 7e-77
Identities = 197/212 (92%), Gaps = 1/212 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 561 atgcagatcttcgtgaagaccctgactggcaagaccatcaccctggaggtggagcccagt 620
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
|| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 621 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 680
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
|||||||| |||||||| ||||| || |||||||||||| ||||| ||||||||||||||
Sbjct: 681 cagaggctgatctttgccggcaaacagctggaagatggccgcaccctctctgattacaac 740
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
|||||||| ||||| |||||||||||||||||
Sbjct: 741 atccagaaggagtcaaccctgcacctggtcct 772
>emb|AL596181.10| Mouse DNA sequence from clone RP23-234K24 on chromosome 11, complete
sequence
Length = 195339
Score = 315 bits (159), Expect = 2e-83
Identities = 205/219 (93%), Gaps = 1/219 (0%)
Strand = Plus / Minus
Query: 57 ggtcaaaatgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatgga 116
|||||||||||| ||||||| |||||||||||| ||||||||||||||||||||| ||||
Sbjct: 122012 ggtcaaaatgcagatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtgga 121953
Query: 117 gcccagtgaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc 176
||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 121952 gcccagtgacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccc 121893
Query: 177 -gaccagcagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctga 235
|||||||||||||| |||||||| |||||||| |||||||||||| ||||| |||||||
Sbjct: 121892 tgaccagcagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctga 121833
Query: 236 ttacaacatccagaaagagtcgaccctgcacctggtcct 274
||||||||||||||| ||||| |||||||||||||||||
Sbjct: 121832 ttacaacatccagaaggagtcaaccctgcacctggtcct 121794
Score = 303 bits (153), Expect = 7e-80
Identities = 199/213 (93%), Gaps = 1/213 (0%)
Strand = Plus / Minus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||| ||||||||||||||||| ||| |||||||||||
Sbjct: 121777 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 121718
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
|| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 121717 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 121658
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
|||||||| |||||||| |||||||| |||||||||||| ||||| ||||||||||||||
Sbjct: 121657 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 121598
Query: 243 atccagaaagagtcgaccctgcacctggtcctc 275
|||||||||||||| ||||||||||||||||||
Sbjct: 121597 atccagaaagagtcaaccctgcacctggtcctc 121565
Score = 301 bits (152), Expect = 3e-79
Identities = 198/212 (93%), Gaps = 1/212 (0%)
Strand = Plus / Minus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 121549 atgcagatcttcgtgaagaccctgactggcaagaccatcaccctggaggtggagcccagt 121490
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
|| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 121489 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 121430
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
|||||||| |||||||| |||||||| |||||||||||| ||||| ||||||||||||||
Sbjct: 121429 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 121370
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
|||||||| ||||| |||||||||||||||||
Sbjct: 121369 atccagaaggagtcaaccctgcacctggtcct 121338
Score = 295 bits (149), Expect = 2e-77
Identities = 198/213 (92%), Gaps = 1/213 (0%)
Strand = Plus / Minus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||| ||||||||||||||| | ||| |||||||||||
Sbjct: 121321 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccttggaggtggagcccagt 121262
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
|| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 121261 gacaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccctgaccag 121202
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
|||||||| |||||||| |||||||| || ||||||||| |||| ||||||||||||||
Sbjct: 121201 cagaggctgatctttgccggcaagcagctagaagatggccgcactctctctgattacaac 121142
Query: 243 atccagaaagagtcgaccctgcacctggtcctc 275
|||||||||||||||||||||||||||||||||
Sbjct: 121141 atccagaaagagtcgaccctgcacctggtcctc 121109
>emb|X51703.1|MMUBIQU Mouse mRNA for ubiquitin
Length = 1172
Score = 315 bits (159), Expect = 2e-83
Identities = 205/219 (93%), Gaps = 1/219 (0%)
Strand = Plus / Plus
Query: 57 ggtcaaaatgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatgga 116
|||||||||||| ||||||| |||||||||||| ||||||||||||||||||||| ||||
Sbjct: 98 ggtcaaaatgcagatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtgga 157
Query: 117 gcccagtgaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc 176
||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 158 gcccagtgacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccc 217
Query: 177 -gaccagcagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctga 235
|||||||||||||| |||||||| |||||||| |||||||||||| ||||| |||||||
Sbjct: 218 tgaccagcagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctga 277
Query: 236 ttacaacatccagaaagagtcgaccctgcacctggtcct 274
||||||||||||||| ||||| |||||||||||||||||
Sbjct: 278 ttacaacatccagaaggagtcaaccctgcacctggtcct 316
Score = 303 bits (153), Expect = 7e-80
Identities = 199/213 (93%), Gaps = 1/213 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||| ||||||||||||||||| ||| |||||||||||
Sbjct: 333 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 392
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
|| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 393 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 452
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
|||||||| |||||||| |||||||| |||||||||||| ||||| ||||||||||||||
Sbjct: 453 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 512
Query: 243 atccagaaagagtcgaccctgcacctggtcctc 275
|||||||||||||| ||||||||||||||||||
Sbjct: 513 atccagaaagagtcaaccctgcacctggtcctc 545
Score = 295 bits (149), Expect = 2e-77
Identities = 198/213 (92%), Gaps = 1/213 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||| ||||||||||||||| | ||| |||||||||||
Sbjct: 789 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccttggaggtggagcccagt 848
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
|| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 849 gacaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccctgaccag 908
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
|||||||| |||||||| |||||||| || ||||||||| |||| ||||||||||||||
Sbjct: 909 cagaggctgatctttgccggcaagcagctagaagatggccgcactctctctgattacaac 968
Query: 243 atccagaaagagtcgaccctgcacctggtcctc 275
|||||||||||||||||||||||||||||||||
Sbjct: 969 atccagaaagagtcgaccctgcacctggtcctc 1001
Score = 293 bits (148), Expect = 7e-77
Identities = 197/212 (92%), Gaps = 1/212 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 561 atgcagatcttcgtgaagaccctgactggcaagaccatcaccctggaggtggagcccagt 620
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
|| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 621 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 680
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
|||||||| |||||||| ||||| || |||||||||||| ||||| ||||||||||||||
Sbjct: 681 cagaggctgatctttgccggcaaacagctggaagatggccgcaccctctctgattacaac 740
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
|||||||| ||||| |||||||||||||||||
Sbjct: 741 atccagaaggagtcaaccctgcacctggtcct 772
>dbj|AK012443.1| Mus musculus 11 days embryo whole body cDNA, RIKEN full-length
enriched library, clone:2700055N04:ubiquitin B, full
insert sequence
Length = 1166
Score = 315 bits (159), Expect = 2e-83
Identities = 205/219 (93%), Gaps = 1/219 (0%)
Strand = Plus / Plus
Query: 57 ggtcaaaatgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatgga 116
|||||||||||| ||||||| |||||||||||| ||||||||||||||||||||| ||||
Sbjct: 94 ggtcaaaatgcagatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtgga 153
Query: 117 gcccagtgaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc 176
||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 154 gcccagtgacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccc 213
Query: 177 -gaccagcagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctga 235
|||||||||||||| |||||||| |||||||| |||||||||||| ||||| |||||||
Sbjct: 214 tgaccagcagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctga 273
Query: 236 ttacaacatccagaaagagtcgaccctgcacctggtcct 274
||||||||||||||| ||||| |||||||||||||||||
Sbjct: 274 ttacaacatccagaaggagtcaaccctgcacctggtcct 312
Score = 301 bits (152), Expect = 3e-79
Identities = 198/212 (93%), Gaps = 1/212 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 557 atgcagatcttcgtgaagaccctgactggcaagaccatcaccctggaggtggagcccagt 616
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
|| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 617 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 676
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
|||||||| |||||||| |||||||| |||||||||||| ||||| ||||||||||||||
Sbjct: 677 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 736
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
|||||||| ||||| |||||||||||||||||
Sbjct: 737 atccagaaggagtcaaccctgcacctggtcct 768
Score = 297 bits (150), Expect = 4e-78
Identities = 196/210 (93%), Gaps = 1/210 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||| ||||||||||||||||| ||| |||||||||||
Sbjct: 329 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 388
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
|| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 389 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 448
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
|||||||| |||||||| |||||||| |||||||||||| ||||| ||||||||||||||
Sbjct: 449 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 508
Query: 243 atccagaaagagtcgaccctgcacctggtc 272
|||||||||||||| |||||||||||||||
Sbjct: 509 atccagaaagagtcaaccctgcacctggtc 538
Score = 295 bits (149), Expect = 2e-77
Identities = 198/213 (92%), Gaps = 1/213 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||| ||||||||||||||| | ||| |||||||||||
Sbjct: 785 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccttggaggtggagcccagt 844
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
|| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 845 gacaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccctgaccag 904
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
|||||||| |||||||| |||||||| || ||||||||| |||| ||||||||||||||
Sbjct: 905 cagaggctgatctttgccggcaagcagctagaagatggccgcactctctctgattacaac 964
Query: 243 atccagaaagagtcgaccctgcacctggtcctc 275
|||||||||||||||||||||||||||||||||
Sbjct: 965 atccagaaagagtcgaccctgcacctggtcctc 997
>dbj|AK013027.1| Mus musculus 10, 11 days embryo whole body cDNA, RIKEN full-length
enriched library, clone:2810407D23:ubiquitin B, full
insert sequence
Length = 1167
Score = 315 bits (159), Expect = 2e-83
Identities = 205/219 (93%), Gaps = 1/219 (0%)
Strand = Plus / Plus
Query: 57 ggtcaaaatgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatgga 116
|||||||||||| ||||||| |||||||||||| ||||||||||||||||||||| ||||
Sbjct: 93 ggtcaaaatgcagatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtgga 152
Query: 117 gcccagtgaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc 176
||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 153 gcccagtgacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccc 212
Query: 177 -gaccagcagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctga 235
|||||||||||||| |||||||| |||||||| |||||||||||| ||||| |||||||
Sbjct: 213 tgaccagcagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctga 272
Query: 236 ttacaacatccagaaagagtcgaccctgcacctggtcct 274
||||||||||||||| ||||| |||||||||||||||||
Sbjct: 273 ttacaacatccagaaggagtcaaccctgcacctggtcct 311
Score = 303 bits (153), Expect = 7e-80
Identities = 199/213 (93%), Gaps = 1/213 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||| ||||||||||||||||| ||| |||||||||||
Sbjct: 328 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 387
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
|| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 388 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 447
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
|||||||| |||||||| |||||||| |||||||||||| ||||| ||||||||||||||
Sbjct: 448 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 507
Query: 243 atccagaaagagtcgaccctgcacctggtcctc 275
|||||||||||||| ||||||||||||||||||
Sbjct: 508 atccagaaagagtcaaccctgcacctggtcctc 540
Score = 301 bits (152), Expect = 3e-79
Identities = 198/212 (93%), Gaps = 1/212 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 556 atgcagatcttcgtgaagaccctgactggcaagaccatcaccctggaggtggagcccagt 615
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
|| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 616 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 675
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
|||||||| |||||||| |||||||| |||||||||||| ||||| ||||||||||||||
Sbjct: 676 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 735
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
|||||||| ||||| |||||||||||||||||
Sbjct: 736 atccagaaggagtcaaccctgcacctggtcct 767
Score = 295 bits (149), Expect = 2e-77
Identities = 198/213 (92%), Gaps = 1/213 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||| ||||||||||||||| | ||| |||||||||||
Sbjct: 784 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccttggaggtggagcccagt 843
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
|| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 844 gacaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccctgaccag 903
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
|||||||| |||||||| |||||||| || ||||||||| |||| ||||||||||||||
Sbjct: 904 cagaggctgatctttgccggcaagcagctagaagatggccgcactctctctgattacaac 963
Query: 243 atccagaaagagtcgaccctgcacctggtcctc 275
|||||||||||||||||||||||||||||||||
Sbjct: 964 atccagaaagagtcgaccctgcacctggtcctc 996
>dbj|AK010625.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library,
clone:2410036G24:ubiquitin B, full insert sequence
Length = 1160
Score = 315 bits (159), Expect = 2e-83
Identities = 205/219 (93%), Gaps = 1/219 (0%)
Strand = Plus / Plus
Query: 57 ggtcaaaatgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatgga 116
|||||||||||| ||||||| |||||||||||| ||||||||||||||||||||| ||||
Sbjct: 93 ggtcaaaatgcagatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtgga 152
Query: 117 gcccagtgaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc 176
||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 153 gcccagtgacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccc 212
Query: 177 -gaccagcagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctga 235
|||||||||||||| |||||||| |||||||| |||||||||||| ||||| |||||||
Sbjct: 213 tgaccagcagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctga 272
Query: 236 ttacaacatccagaaagagtcgaccctgcacctggtcct 274
||||||||||||||| ||||| |||||||||||||||||
Sbjct: 273 ttacaacatccagaaggagtcaaccctgcacctggtcct 311
Score = 303 bits (153), Expect = 7e-80
Identities = 199/213 (93%), Gaps = 1/213 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||| ||||||||||||||||| ||| |||||||||||
Sbjct: 328 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 387
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
|| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 388 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 447
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
|||||||| |||||||| |||||||| |||||||||||| ||||| ||||||||||||||
Sbjct: 448 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 507
Query: 243 atccagaaagagtcgaccctgcacctggtcctc 275
|||||||||||||| ||||||||||||||||||
Sbjct: 508 atccagaaagagtcaaccctgcacctggtcctc 540
Score = 301 bits (152), Expect = 3e-79
Identities = 198/212 (93%), Gaps = 1/212 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 556 atgcagatcttcgtgaagaccctgactggcaagaccatcaccctggaggtggagcccagt 615
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
|| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 616 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 675
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
|||||||| |||||||| |||||||| |||||||||||| ||||| ||||||||||||||
Sbjct: 676 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 735
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
|||||||| ||||| |||||||||||||||||
Sbjct: 736 atccagaaggagtcaaccctgcacctggtcct 767
Score = 295 bits (149), Expect = 2e-77
Identities = 198/213 (92%), Gaps = 1/213 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||| ||||||||||||||| | ||| |||||||||||
Sbjct: 784 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccttggaggtggagcccagt 843
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
|| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 844 gacaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccctgaccag 903
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
|||||||| |||||||| |||||||| || ||||||||| |||| ||||||||||||||
Sbjct: 904 cagaggctgatctttgccggcaagcagctagaagatggccgcactctctctgattacaac 963
Query: 243 atccagaaagagtcgaccctgcacctggtcctc 275
|||||||||||||||||||||||||||||||||
Sbjct: 964 atccagaaagagtcgaccctgcacctggtcctc 996
>dbj|AK003190.1| Mus musculus 18 days embryo whole body cDNA, RIKEN full-length
enriched library, clone:1100001L13:ubiquitin B, full
insert sequence
Length = 932
Score = 315 bits (159), Expect = 2e-83
Identities = 205/219 (93%), Gaps = 1/219 (0%)
Strand = Plus / Plus
Query: 57 ggtcaaaatgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatgga 116
|||||||||||| ||||||| |||||||||||| ||||||||||||||||||||| ||||
Sbjct: 93 ggtcaaaatgcagatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtgga 152
Query: 117 gcccagtgaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc 176
||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 153 gcccagtgacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccc 212
Query: 177 -gaccagcagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctga 235
|||||||||||||| |||||||| |||||||| |||||||||||| ||||| |||||||
Sbjct: 213 tgaccagcagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctga 272
Query: 236 ttacaacatccagaaagagtcgaccctgcacctggtcct 274
||||||||||||||| ||||| |||||||||||||||||
Sbjct: 273 ttacaacatccagaaggagtcaaccctgcacctggtcct 311
Score = 295 bits (149), Expect = 2e-77
Identities = 198/213 (92%), Gaps = 1/213 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||| ||||||||||||||| | ||| |||||||||||
Sbjct: 556 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccttggaggtggagcccagt 615
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
|| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 616 gacaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccctgaccag 675
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
|||||||| |||||||| |||||||| || ||||||||| |||| ||||||||||||||
Sbjct: 676 cagaggctgatctttgccggcaagcagctagaagatggccgcactctctctgattacaac 735
Query: 243 atccagaaagagtcgaccctgcacctggtcctc 275
|||||||||||||||||||||||||||||||||
Sbjct: 736 atccagaaagagtcgaccctgcacctggtcctc 768
Score = 293 bits (148), Expect = 7e-77
Identities = 197/212 (92%), Gaps = 1/212 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||| ||||||||||||||||| ||| |||||||||||
Sbjct: 328 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 387
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
|| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 388 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 447
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
|||||||| |||||||| |||||||| |||||||||||| ||||| ||||||||||||||
Sbjct: 448 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 507
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
|||||||| ||||| |||||||||||||||||
Sbjct: 508 atccagaaggagtcaaccctgcacctggtcct 539
>dbj|AK010413.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library,
clone:2410005G06:ubiquitin B, full insert sequence
Length = 1165
Score = 315 bits (159), Expect = 2e-83
Identities = 205/219 (93%), Gaps = 1/219 (0%)
Strand = Plus / Plus
Query: 57 ggtcaaaatgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatgga 116
|||||||||||| ||||||| |||||||||||| ||||||||||||||||||||| ||||
Sbjct: 94 ggtcaaaatgcagatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtgga 153
Query: 117 gcccagtgaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc 176
||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 154 gcccagtgacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccc 213
Query: 177 -gaccagcagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctga 235
|||||||||||||| |||||||| |||||||| |||||||||||| ||||| |||||||
Sbjct: 214 tgaccagcagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctga 273
Query: 236 ttacaacatccagaaagagtcgaccctgcacctggtcct 274
||||||||||||||| ||||| |||||||||||||||||
Sbjct: 274 ttacaacatccagaaggagtcaaccctgcacctggtcct 312
Score = 303 bits (153), Expect = 7e-80
Identities = 199/213 (93%), Gaps = 1/213 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||| ||||||||||||||||| ||| |||||||||||
Sbjct: 329 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 388
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
|| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 389 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 448
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
|||||||| |||||||| |||||||| |||||||||||| ||||| ||||||||||||||
Sbjct: 449 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 508
Query: 243 atccagaaagagtcgaccctgcacctggtcctc 275
|||||||||||||| ||||||||||||||||||
Sbjct: 509 atccagaaagagtcaaccctgcacctggtcctc 541
Score = 301 bits (152), Expect = 3e-79
Identities = 198/212 (93%), Gaps = 1/212 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 557 atgcagatcttcgtgaagaccctgactggcaagaccatcaccctggaggtggagcccagt 616
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
|| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 617 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 676
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
|||||||| |||||||| |||||||| |||||||||||| ||||| ||||||||||||||
Sbjct: 677 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 736
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
|||||||| ||||| |||||||||||||||||
Sbjct: 737 atccagaaggagtcaaccctgcacctggtcct 768
Score = 295 bits (149), Expect = 2e-77
Identities = 198/213 (92%), Gaps = 1/213 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||| ||||||||||||||| | ||| |||||||||||
Sbjct: 785 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccttggaggtggagcccagt 844
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
|| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 845 gacaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccctgaccag 904
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
|||||||| |||||||| |||||||| || ||||||||| |||| ||||||||||||||
Sbjct: 905 cagaggctgatctttgccggcaagcagctagaagatggccgcactctctctgattacaac 964
Query: 243 atccagaaagagtcgaccctgcacctggtcctc 275
|||||||||||||||||||||||||||||||||
Sbjct: 965 atccagaaagagtcgaccctgcacctggtcctc 997
>dbj|AK007273.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
library, clone:1700124N12:ubiquitin B, full insert
sequence
Length = 1195
Score = 315 bits (159), Expect = 2e-83
Identities = 205/219 (93%), Gaps = 1/219 (0%)
Strand = Plus / Plus
Query: 57 ggtcaaaatgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatgga 116
|||||||||||| ||||||| |||||||||||| ||||||||||||||||||||| ||||
Sbjct: 124 ggtcaaaatgcagatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtgga 183
Query: 117 gcccagtgaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc 176
||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 184 gcccagtgacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccc 243
Query: 177 -gaccagcagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctga 235
|||||||||||||| |||||||| |||||||| |||||||||||| ||||| |||||||
Sbjct: 244 tgaccagcagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctga 303
Query: 236 ttacaacatccagaaagagtcgaccctgcacctggtcct 274
||||||||||||||| ||||| |||||||||||||||||
Sbjct: 304 ttacaacatccagaaggagtcaaccctgcacctggtcct 342
Score = 303 bits (153), Expect = 7e-80
Identities = 199/213 (93%), Gaps = 1/213 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||| ||||||||||||||||| ||| |||||||||||
Sbjct: 359 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 418
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
|| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 419 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 478
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
|||||||| |||||||| |||||||| |||||||||||| ||||| ||||||||||||||
Sbjct: 479 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 538
Query: 243 atccagaaagagtcgaccctgcacctggtcctc 275
|||||||||||||| ||||||||||||||||||
Sbjct: 539 atccagaaagagtcaaccctgcacctggtcctc 571
Score = 301 bits (152), Expect = 3e-79
Identities = 198/212 (93%), Gaps = 1/212 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 587 atgcagatcttcgtgaagaccctgactggcaagaccatcaccctggaggtggagcccagt 646
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
|| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 647 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 706
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
|||||||| |||||||| |||||||| |||||||||||| ||||| ||||||||||||||
Sbjct: 707 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 766
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
|||||||| ||||| |||||||||||||||||
Sbjct: 767 atccagaaggagtcaaccctgcacctggtcct 798
Score = 295 bits (149), Expect = 2e-77
Identities = 198/213 (92%), Gaps = 1/213 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||| ||||||||||||||| | ||| |||||||||||
Sbjct: 815 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccttggaggtggagcccagt 874
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
|| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 875 gacaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccctgaccag 934
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
|||||||| |||||||| |||||||| || ||||||||| |||| ||||||||||||||
Sbjct: 935 cagaggctgatctttgccggcaagcagctagaagatggccgcactctctctgattacaac 994
Query: 243 atccagaaagagtcgaccctgcacctggtcctc 275
|||||||||||||||||||||||||||||||||
Sbjct: 995 atccagaaagagtcgaccctgcacctggtcctc 1027
>ref|XM_122700.1| Mus musculus similar to polyubiquitin 10 - rat (LOC218963), mRNA
Length = 840
Score = 303 bits (153), Expect = 7e-80
Identities = 199/213 (93%), Gaps = 1/213 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||| ||||||||||||||||||||| |||||||||||
Sbjct: 1 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtggagcccagt 60
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
|| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 61 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 120
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
|||||||| |||||||| |||||||| |||||||||||| ||||| ||||||||||||||
Sbjct: 121 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 180
Query: 243 atccagaaagagtcgaccctgcacctggtcctc 275
|||||||| ||||| ||||||||||||||||||
Sbjct: 181 atccagaaggagtcaaccctgcacctggtcctc 213
Score = 303 bits (153), Expect = 7e-80
Identities = 199/213 (93%), Gaps = 1/213 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||| ||||||||||||||||| ||| |||||||||||
Sbjct: 229 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 288
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
|| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 289 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 348
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
|||||||| |||||||| |||||||| |||||||||||| ||||| ||||||||||||||
Sbjct: 349 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 408
Query: 243 atccagaaagagtcgaccctgcacctggtcctc 275
|||||||||||||| ||||||||||||||||||
Sbjct: 409 atccagaaagagtcaaccctgcacctggtcctc 441
Score = 299 bits (151), Expect = 1e-78
Identities = 199/214 (92%), Gaps = 2/214 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 457 atgcagatcttcgtgaagaccctgactggcaagaccatcaccctggaggtggagcccagt 516
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc--gacca 181
|| ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 517 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatccccccctgacca 576
Query: 182 gcagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaa 241
||||||||| |||||||| |||||||| || ||||||||| |||| |||||||||||||
Sbjct: 577 gcagaggctgatctttgccggcaagcagctagaagatggccgcactctctctgattacaa 636
Query: 242 catccagaaagagtcgaccctgcacctggtcctc 275
||||||||||||||||||||||||||||||||||
Sbjct: 637 catccagaaagagtcgaccctgcacctggtcctc 670
>ref|XM_135280.2| Mus musculus similar to polyubiquitin [Rattus norvegicus]
(LOC212125), mRNA
Length = 839
Score = 303 bits (153), Expect = 7e-80
Identities = 199/213 (93%), Gaps = 1/213 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||| ||||||||||||||||||||| |||||||||||
Sbjct: 1 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtggagcccagt 60
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
|| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 61 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 120
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
|||||||| |||||||| |||||||| |||||||||||| ||||| ||||||||||||||
Sbjct: 121 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 180
Query: 243 atccagaaagagtcgaccctgcacctggtcctc 275
|||||||| ||||| ||||||||||||||||||
Sbjct: 181 atccagaaggagtcaaccctgcacctggtcctc 213
Score = 303 bits (153), Expect = 7e-80
Identities = 199/213 (93%), Gaps = 1/213 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||| ||||||||||||||||| ||| |||||||||||
Sbjct: 229 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 288
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
|| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 289 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 348
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
|||||||| |||||||| |||||||| |||||||||||| ||||| ||||||||||||||
Sbjct: 349 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 408
Query: 243 atccagaaagagtcgaccctgcacctggtcctc 275
|||||||||||||| ||||||||||||||||||
Sbjct: 409 atccagaaagagtcaaccctgcacctggtcctc 441
Score = 299 bits (151), Expect = 1e-78
Identities = 194/207 (93%), Gaps = 1/207 (0%)
Strand = Plus / Plus
Query: 70 atcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagtgaaacc 129
||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||| |||
Sbjct: 463 atcttcgtgaagaccctgactggcaagaccatcaccctggaggtggagcccagtgacacc 522
Query: 130 atcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccagcagagg 188
|||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 523 atcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccagcagagg 582
Query: 189 ctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaacatccag 248
|| |||||||| |||||||| || ||||||||| |||| ||||||||||||||||||||
Sbjct: 583 ctgatctttgccggcaagcagctagaagatggccgcactctctctgattacaacatccag 642
Query: 249 aaagagtcgaccctgcacctggtcctc 275
|||||||||||||||||||||||||||
Sbjct: 643 aaagagtcgaccctgcacctggtcctc 669
>emb|X60390.1|CGPOLYUGE C.griseus gene for polyubiquitin
Length = 1603
Score = 303 bits (153), Expect = 7e-80
Identities = 199/213 (93%), Gaps = 1/213 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1089 atgcagatcttcgtgaagaccctgactggcaagaccatcaccctagaggtggagcccagt 1148
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcat-ccccccgaccag 182
|| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1149 gacaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccccgaccag 1208
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
||| | ||||||||||| |||||||| |||||||||||| |||| | ||||||||||||
Sbjct: 1209 cagcgactcatctttgccggcaagcagctggaagatggccgcactctttctgattacaac 1268
Query: 243 atccagaaagagtcgaccctgcacctggtcctc 275
|||||||||||||| ||||||||||||||||||
Sbjct: 1269 atccagaaagagtccaccctgcacctggtcctc 1301
Score = 301 bits (152), Expect = 3e-79
Identities = 204/220 (92%), Gaps = 1/220 (0%)
Strand = Plus / Plus
Query: 57 ggtcaaaatgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatgga 116
|||||||||||||||||||| |||||||||||| ||||||||||||||||||||| ||||
Sbjct: 170 ggtcaaaatgcaaatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtgga 229
Query: 117 gcccagtgaaaccatcgagaatgtgaaggccaagatccaggataaagagggcat-ccccc 175
||||||||| |||||||| ||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 230 gcccagtgacaccatcgaaaatgtcaaggccaagatccaggataaagagggcatcccccc 289
Query: 176 cgaccagcagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctga 235
|||||||||| | ||||||||||| |||||||| |||||||||||| |||| | |||||
Sbjct: 290 cgaccagcagcgactcatctttgccggcaagcagctggaagatggccgcactctttctga 349
Query: 236 ttacaacatccagaaagagtcgaccctgcacctggtcctc 275
||||||||||||||||||||| ||||||||||||||||||
Sbjct: 350 ttacaacatccagaaagagtccaccctgcacctggtcctc 389
Score = 280 bits (141), Expect = 1e-72
Identities = 196/213 (92%), Gaps = 1/213 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||| ||||||||||||||||||||| |||||||||||
Sbjct: 633 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtggagcccagt 692
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcat-ccccccgaccag 182
|| |||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 693 gacaccatcgagaatgtcaaggccaagatccaggataaggagggcatcccccccgaccag 752
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
||| | ||||||||||| |||||||| |||||||||||| |||| | ||||||||||||
Sbjct: 753 cagcgactcatctttgccggcaagcagctggaagatggccgcactctttctgattacaac 812
Query: 243 atccagaaagagtcgaccctgcacctggtcctc 275
|||||||||||||| ||||||||||||||||||
Sbjct: 813 atccagaaagagtccaccctgcacctggtcctc 845
Score = 264 bits (133), Expect = 6e-68
Identities = 194/213 (91%), Gaps = 1/213 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| || |||| |||||||||||| ||||||||||||||||||||| |||| ||||||
Sbjct: 861 atgcagattttcgtgaagaccctgaccggcaagaccatcaccctagaggtggaacccagt 920
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcat-ccccccgaccag 182
|| |||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 921 gacaccatcgagaatgtcaaggccaagatccaggataaggagggcatcccccccgaccag 980
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
||| | ||||||||||| |||||||| |||||||||||| |||| | ||||||||||||
Sbjct: 981 cagcgactcatctttgccggcaagcagctggaagatggccgcactctttctgattacaac 1040
Query: 243 atccagaaagagtcgaccctgcacctggtcctc 275
|||||||||||||| ||||||||||||||||||
Sbjct: 1041 atccagaaagagtccaccctgcacctggtcctc 1073
Score = 264 bits (133), Expect = 6e-68
Identities = 194/213 (91%), Gaps = 1/213 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| || |||| |||||||||||| ||||||||||||||||||||| |||| ||||||
Sbjct: 405 atgcagattttcgtgaagaccctgaccggcaagaccatcaccctagaggtggaacccagt 464
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcat-ccccccgaccag 182
|| |||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 465 gacaccatcgagaatgtcaaggccaagatccaggataaggagggcatcccccccgaccag 524
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
||| | ||||||||||| |||||||| |||||||||||| |||| | ||||||||||||
Sbjct: 525 cagcgactcatctttgccggcaagcagctggaagatggccgcactctttctgattacaac 584
Query: 243 atccagaaagagtcgaccctgcacctggtcctc 275
|||||||||||||| ||||||||||||||||||
Sbjct: 585 atccagaaagagtccaccctgcacctggtcctc 617
>ref|XM_143052.1| Mus musculus similar to fusion protein: ubiquitin (bases 43_513);
ribosomal protein S27a (bases 217_532) [Rattus
norvegicus] (LOC241863), mRNA
Length = 858
Score = 301 bits (152), Expect = 3e-79
Identities = 195/208 (93%), Gaps = 1/208 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||| ||||||||||||||||||||| |||||||||||
Sbjct: 1 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtggagcccagt 60
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
|| ||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 61 gacaccattgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 120
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
|||||||| |||||||| |||||||| |||||||||||| ||||| ||||||||||||||
Sbjct: 121 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 180
Query: 243 atccagaaagagtcgaccctgcacctgg 270
||||||||||||||||||||||||||||
Sbjct: 181 atccagaaagagtcgaccctgcacctgg 208
>emb|X08013.1|CSUBIQ Chinese hamster mRNA for ubiquitin
Length = 752
Score = 301 bits (152), Expect = 3e-79
Identities = 204/220 (92%), Gaps = 1/220 (0%)
Strand = Plus / Plus
Query: 57 ggtcaaaatgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatgga 116
|||||||||||||||||||| |||||||||||| ||||||||||||||||||||| ||||
Sbjct: 78 ggtcaaaatgcaaatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtgga 137
Query: 117 gcccagtgaaaccatcgagaatgtgaaggccaagatccaggataaagagggcat-ccccc 175
||||||||| |||||||| ||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 138 gcccagtgacaccatcgaaaatgtcaaggccaagatccaggataaagagggcatcccccc 197
Query: 176 cgaccagcagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctga 235
|||||||||| | ||||||||||| |||||||| |||||||||||| |||| | |||||
Sbjct: 198 cgaccagcagcgactcatctttgccggcaagcagctggaagatggccgcactctttctga 257
Query: 236 ttacaacatccagaaagagtcgaccctgcacctggtcctc 275
||||||||||||||||||||| ||||||||||||||||||
Sbjct: 258 ttacaacatccagaaagagtccaccctgcacctggtcctc 297
Score = 301 bits (152), Expect = 3e-79
Identities = 198/212 (93%), Gaps = 1/212 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 541 atgcagatcttcgtgaagaccctgactggcaagaccatcaccctagaggtggagcccagt 600
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcat-ccccccgaccag 182
|| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 601 gacaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccccgaccag 660
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
||| | ||||||||||| |||||||| |||||||||||| |||| | ||||||||||||
Sbjct: 661 cagcgactcatctttgccggcaagcagctggaagatggccgcactctttctgattacaac 720
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
|||||||||||||| |||||||||||||||||
Sbjct: 721 atccagaaagagtccaccctgcacctggtcct 752
Score = 264 bits (133), Expect = 6e-68
Identities = 194/213 (91%), Gaps = 1/213 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| || |||| |||||||||||| ||||||||||||||||||||| |||| ||||||
Sbjct: 313 atgcagattttcgtgaagaccctgaccggcaagaccatcaccctagaggtggaacccagt 372
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcat-ccccccgaccag 182
|| |||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 373 gacaccatcgagaatgtcaaggccaagatccaggataaggagggcatcccccccgaccag 432
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
||| | ||||||||||| |||||||| |||||||||||| |||| | ||||||||||||
Sbjct: 433 cagcgactcatctttgccggcaagcagctggaagatggccgcactctttctgattacaac 492
Query: 243 atccagaaagagtcgaccctgcacctggtcctc 275
|||||||||||||| ||||||||||||||||||
Sbjct: 493 atccagaaagagtccaccctgcacctggtcctc 525
>dbj|AK013873.1| Mus musculus 12 days embryo head cDNA, RIKEN full-length enriched
library, clone:3000008M07:ubiquitin B, full insert
sequence
Length = 1162
Score = 301 bits (152), Expect = 3e-79
Identities = 198/212 (93%), Gaps = 1/212 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 554 atgcagatcttcgtgaagaccctgactggcaagaccatcaccctggaggtggagcccagt 613
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
|| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 614 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 673
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
|||||||| |||||||| |||||||| |||||||||||| ||||| ||||||||||||||
Sbjct: 674 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 733
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
|||||||| ||||| |||||||||||||||||
Sbjct: 734 atccagaaggagtcaaccctgcacctggtcct 765
Score = 291 bits (147), Expect = 3e-76
Identities = 202/219 (92%), Gaps = 1/219 (0%)
Strand = Plus / Plus
Query: 57 ggtcaaaatgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatgga 116
|||||||||||| ||||||| |||||||||||| ||||||||||||||||||||| ||||
Sbjct: 91 ggtcaaaatgcagatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtgga 150
Query: 117 gcccagtgaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc 176
||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||
Sbjct: 151 gcccagtgacaccatcgagaacgtgaaggccaagatccgggataaagagggcatcccccc 210
Query: 177 -gaccagcagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctga 235
|||||||||||||| |||||||| |||||||| ||||||||||| ||||| |||||||
Sbjct: 211 tgaccagcagaggctgatctttgccggcaagcagctggaagatggaagcaccctctctga 270
Query: 236 ttacaacatccagaaagagtcgaccctgcacctggtcct 274
|||||||| |||||| ||||| |||||||||||||||||
Sbjct: 271 ttacaacaaccagaaggagtcaaccctgcacctggtcct 309
Score = 287 bits (145), Expect = 4e-75
Identities = 197/213 (92%), Gaps = 1/213 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||| ||||||||||||||| | ||| |||||||||||
Sbjct: 782 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccttggaggtggagcccagt 841
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
|| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 842 gacaccatcgagaatgtgaaggccaagatccaggataaggagggcatcccccctgaccag 901
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
|||||||| |||||||| |||||||| || ||||||||| |||| ||||||||||||||
Sbjct: 902 cagaggctgatctttgccggcaagcagctagaagatggccgcactctctctgattacaac 961
Query: 243 atccagaaagagtcgaccctgcacctggtcctc 275
|||||||||||||||||||||||||||||||||
Sbjct: 962 atccagaaagagtcgaccctgcacctggtcctc 994
Score = 287 bits (145), Expect = 4e-75
Identities = 197/213 (92%), Gaps = 1/213 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| ||||||||| || ||||||||||||||||| | | |||||||||||
Sbjct: 326 atgcagatcttcgtgaagacccttaccggcaagaccatcaccctgggggtggagcccagt 385
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
|| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 386 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 445
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
|||||||| |||||||| |||||||| |||||||||||| ||||| ||||||||||||||
Sbjct: 446 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 505
Query: 243 atccagaaagagtcgaccctgcacctggtcctc 275
|||||||||||||| ||||||||||||||||||
Sbjct: 506 atccagaaagagtcaaccctgcacctggtcctc 538
>gb|M81745.1|MUSUBIQB Mouse 1400 base pair ubiquitin mRNA, 3' end
Length = 329
Score = 291 bits (147), Expect = 3e-76
Identities = 193/207 (93%), Gaps = 1/207 (0%)
Strand = Plus / Plus
Query: 70 atcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagtgaaacc 129
||||||| |||||||||||| ||||||||||||||| | ||| ||||||||||||| |||
Sbjct: 1 atcttcgtgaagaccctgaccggcaagaccatcaccttggaggtggagcccagtgacacc 60
Query: 130 atcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccagcagagg 188
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 61 atcgagaatgtgaaggccaagatccaggataaagagggcatcccccctgaccagcagagg 120
Query: 189 ctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaacatccag 248
|| |||||||| |||||||| || ||||||||| |||| ||||||||||||||||||||
Sbjct: 121 ctgatctttgccggcaagcagctagaagatggccgcactctctctgattacaacatccag 180
Query: 249 aaagagtcgaccctgcacctggtcctc 275
|||||||||||||||||||||||||||
Sbjct: 181 aaagagtcgaccctgcacctggtcctc 207
>gb|AF506969.1| Equus caballus ubiquitin mRNA, complete cds
Length = 1157
Score = 287 bits (145), Expect = 4e-75
Identities = 194/209 (92%), Gaps = 1/209 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| || |||| |||||||||||| ||||||||||||||||| ||| ||||||||||
Sbjct: 803 atgcagattttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagc 862
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
|| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 863 gacaccatcgagaatgtgaaggccaagatccaggataaggagggcatcccccccgaccag 922
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
|||||||||||||||||||||||||| |||||||||||| |||| | ||||||||||||
Sbjct: 923 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgattacaac 982
Query: 243 atccagaaagagtcgaccctgcacctggt 271
|||||||||||||||||||||||||||||
Sbjct: 983 atccagaaagagtcgaccctgcacctggt 1011
Score = 278 bits (140), Expect = 4e-72
Identities = 198/216 (91%), Gaps = 1/216 (0%)
Strand = Plus / Plus
Query: 57 ggtcaaaatgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatgga 116
|||||||||||| ||||| | |||||||||||| ||||||||||||||||| ||| ||||
Sbjct: 112 ggtcaaaatgcagatctttgtgaagaccctgaccggcaagaccatcaccctggaggtgga 171
Query: 117 gcccagtgaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc 176
|||||| || ||||||||||| || |||||||||||||||||||| ||||||||||||||
Sbjct: 172 gcccagcgacaccatcgagaacgtcaaggccaagatccaggataaggagggcatcccccc 231
Query: 177 -gaccagcagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctga 235
|||||||||||||||||||||||||||||||| |||||||||||| |||| | || ||
Sbjct: 232 cgaccagcagaggctcatctttgcaggcaagcagctggaagatggccgcactctttccga 291
Query: 236 ttacaacatccagaaagagtcgaccctgcacctggt 271
||||||||||||||||||||||||||||||||||||
Sbjct: 292 ttacaacatccagaaagagtcgaccctgcacctggt 327
Score = 240 bits (121), Expect = 8e-61
Identities = 188/209 (89%), Gaps = 1/209 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| || |||| |||||||||||| ||||||||||| ||||| ||| ||||||||||
Sbjct: 575 atgcagattttcgtgaagaccctgaccggcaagaccattaccctggaggtggagcccagc 634
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcat-ccccccgaccag 182
|| ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 635 gacaccatcgagaatgtgaaggccaagatccaggataaggagggcatcccccccgaccag 694
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
|||||| ||||||||||||||||||| ||||| ||||| ||||| | ||||||||||||
Sbjct: 695 cagaggttcatctttgcaggcaagcagctggaggatgggcgcaccctgtctgattacaac 754
Query: 243 atccagaaagagtcgaccctgcacctggt 271
|||||||| ||||| || |||||||||||
Sbjct: 755 atccagaaggagtccactctgcacctggt 783
Score = 232 bits (117), Expect = 2e-58
Identities = 187/209 (89%), Gaps = 1/209 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| || |||| |||||||||||| ||||||||||||||||| ||| ||||||||||
Sbjct: 347 atgcagattttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagc 406
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcat-ccccccgaccag 182
|| ||||||||||| || |||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 407 gacaccatcgagaacgtcaaggccaagatccaggataaggagggcatcccccccgaccag 466
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
|||||||||||||||||||||||||| ||||| ||||| ||||| | ||||| ||||||
Sbjct: 467 cagaggctcatctttgcaggcaagcagctggaggatgggcgcaccctgtctgactacaac 526
Query: 243 atccagaaagagtcgaccctgcacctggt 271
|||||||| ||||| || |||||||||||
Sbjct: 527 atccagaaggagtccactctgcacctggt 555
>gb|AF038129.1|AF038129 Ovis aries polyubiquitin mRNA, complete cds
Length = 1102
Score = 285 bits (144), Expect = 2e-74
Identities = 199/216 (92%), Gaps = 1/216 (0%)
Strand = Plus / Plus
Query: 57 ggtcaaaatgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatgga 116
|||||||||||||||||||| ||| |||||||| ||||||||||||||||| ||| ||||
Sbjct: 89 ggtcaaaatgcaaatcttcgtgaaaaccctgaccggcaagaccatcaccctggaggtgga 148
Query: 117 gcccagtgaaaccatcgagaatgtgaaggccaagatccaggataaagagggca-tccccc 175
||||||||| ||||||||||||||||||||||||||||||||||| || |||| ||||||
Sbjct: 149 gcccagtgacaccatcgagaatgtgaaggccaagatccaggataaggaaggcattccccc 208
Query: 176 cgaccagcagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctga 235
||||||||||||||||||||||| |||||||| |||||||||||| |||| | |||||
Sbjct: 209 tgaccagcagaggctcatctttgccggcaagcagctggaagatggccgcactctttctga 268
Query: 236 ttacaacatccagaaagagtcgaccctgcacctggt 271
||||||||||||||| ||||||||||||||||||||
Sbjct: 269 ttacaacatccagaaggagtcgaccctgcacctggt 304
Score = 264 bits (133), Expect = 6e-68
Identities = 191/209 (91%), Gaps = 1/209 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||| ||||||||||||||||| ||| |||||||||||
Sbjct: 324 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 383
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggca-tccccccgaccag 182
|| ||||||||||| ||||||||||||||||||||||| || |||| |||||| ||||||
Sbjct: 384 gacaccatcgagaacgtgaaggccaagatccaggataaggaaggcattccccctgaccag 443
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
||||||||||||||||| |||||||| |||||||||||| |||| | ||||||||||||
Sbjct: 444 cagaggctcatctttgccggcaagcagctggaagatggccgcactctttctgattacaac 503
Query: 243 atccagaaagagtcgaccctgcacctggt 271
|||||||| ||||||||||||||||||||
Sbjct: 504 atccagaaggagtcgaccctgcacctggt 532
Score = 264 bits (133), Expect = 6e-68
Identities = 191/209 (91%), Gaps = 1/209 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||| ||||||||||||||||| ||| |||||||||||
Sbjct: 552 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 611
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggca-tccccccgaccag 182
|| ||||||||||| ||||||||||||||||||||||| || |||| |||||| ||||||
Sbjct: 612 gacaccatcgagaacgtgaaggccaagatccaggataaggaaggcattccccctgaccag 671
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
||||||||||||||||| |||||||| |||||||||||| |||| | ||||||||||||
Sbjct: 672 cagaggctcatctttgccggcaagcagctggaagatggccgcactctttctgattacaac 731
Query: 243 atccagaaagagtcgaccctgcacctggt 271
|||||||| ||||||||||||||||||||
Sbjct: 732 atccagaaggagtcgaccctgcacctggt 760
Score = 262 bits (132), Expect = 2e-67
Identities = 193/212 (91%), Gaps = 1/212 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||| | |||||||||||| ||||||||||||||||| ||| |||||||||||
Sbjct: 780 atgcagatctttgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 839
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
|| ||||||||||| ||||||||||||||||||||||| || ||||| ||||| ||||||
Sbjct: 840 gacaccatcgagaacgtgaaggccaagatccaggataaggaaggcattccccctgaccag 899
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
||||||||||||||||| |||||||| |||||||||||| |||| | ||||||||||||
Sbjct: 900 cagaggctcatctttgccggcaagcagctggaagatggccgcactctttctgattacaac 959
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
|| |||||||||||||||||||||||||||||
Sbjct: 960 attcagaaagagtcgaccctgcacctggtcct 991
>emb|Z18245.1|BTPOLYUB Bos taurus gene for polyubiquitin
Length = 1144
Score = 285 bits (144), Expect = 2e-74
Identities = 202/220 (91%), Gaps = 1/220 (0%)
Strand = Plus / Plus
Query: 57 ggtcaaaatgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatgga 116
|||||||||||| ||||||| ||| |||||||| ||||||||||||||||| ||| ||||
Sbjct: 80 ggtcaaaatgcagatcttcgtgaaaaccctgaccggcaagaccatcaccctggaggtgga 139
Query: 117 gcccagtgaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc 176
||||||||| ||||||||||| ||||||||||||||||||||||| || ||||| |||||
Sbjct: 140 gcccagtgacaccatcgagaacgtgaaggccaagatccaggataaggaaggcattccccc 199
Query: 177 -gaccagcagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctga 235
||||||||||||||||||||||| |||||||| |||||||||||| |||| | |||||
Sbjct: 200 tgaccagcagaggctcatctttgccggcaagcagctggaagatggccgcactctttctga 259
Query: 236 ttacaacatccagaaagagtcgaccctgcacctggtcctc 275
||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ttacaacatccagaaagagtcgaccctgcacctggtcctc 299
Score = 280 bits (141), Expect = 1e-72
Identities = 196/213 (92%), Gaps = 1/213 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||| ||||||||||||||||| ||| |||||||||||
Sbjct: 543 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 602
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
|| ||||||||||| ||||||||||||||||||||||| || ||||| ||||| ||||||
Sbjct: 603 gacaccatcgagaacgtgaaggccaagatccaggataaggaaggcattccccctgaccag 662
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
||||||||||||||||| |||||||| |||||||||||| |||| | ||||||||||||
Sbjct: 663 cagaggctcatctttgccggcaagcagctggaagatggccgcactctttctgattacaac 722
Query: 243 atccagaaagagtcgaccctgcacctggtcctc 275
|||||||||||||||||||||||||||||||||
Sbjct: 723 atccagaaagagtcgaccctgcacctggtcctc 755
Score = 272 bits (137), Expect = 2e-70
Identities = 195/213 (91%), Gaps = 1/213 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| || |||| |||||||||||| ||||||||||||||||| || |||||||||||
Sbjct: 315 atgcagattttcgtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagt 374
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcat-ccccccgaccag 182
|| ||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 375 gacaccatcgagaacgtgaaggccaagatccaggataaggagggcattccccccgaccag 434
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
||||||||||||||||| |||||||| |||||||||||| |||| | | ||||||||||
Sbjct: 435 cagaggctcatctttgccggcaagcagctggaagatggccgcactctttttgattacaac 494
Query: 243 atccagaaagagtcgaccctgcacctggtcctc 275
|||||||||||||||||||||||||||||||||
Sbjct: 495 atccagaaagagtcgaccctgcacctggtcctc 527
Score = 270 bits (136), Expect = 9e-70
Identities = 194/212 (91%), Gaps = 1/212 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||| ||||||||||||||||| || |||||||||||
Sbjct: 771 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagt 830
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
|| ||||||||||| ||||||||||||||||||||||| || ||||| ||||| ||||||
Sbjct: 831 gacaccatcgagaacgtgaaggccaagatccaggataaggaaggcattccccctgaccag 890
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
||||||||||||||||| |||||||| |||||||||||| |||| | ||||||||||||
Sbjct: 891 cagaggctcatctttgccggcaagcagctggaagatggccgcactctttctgattacaac 950
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
||||||||||||||||||||||||||||||||
Sbjct: 951 atccagaaagagtcgaccctgcacctggtcct 982
>dbj|AB071067.1| Macaca fascicularis testis cDNA clone:QtsA-16192, full insert
sequence
Length = 883
Score = 283 bits (143), Expect = 6e-74
Identities = 201/219 (91%), Gaps = 1/219 (0%)
Strand = Plus / Plus
Query: 57 ggtcaaaatgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatgga 116
|||||||||||| ||||||| |||||||||||| ||||||||||||||||| ||| ||||
Sbjct: 30 ggtcaaaatgcagatcttcgtgaagaccctgaccggcaagaccatcacccttgaggtgga 89
Query: 117 gcccagtgaaaccatcgagaatgtgaaggccaagatccaggataaagagggcat-ccccc 175
||||||||| |||||||| |||||||||||||| ||||||||||| || ||||| |||||
Sbjct: 90 gcccagtgacaccatcgaaaatgtgaaggccaaaatccaggataaggaaggcattccccc 149
Query: 176 cgaccagcagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctga 235
||||||||||||||||||||||||||||||||| |||||||||||| |||| | |||||
Sbjct: 150 cgaccagcagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctga 209
Query: 236 ttacaacatccagaaagagtcgaccctgcacctggtcct 274
|||||||||||||||||||||||||||||||| |||||
Sbjct: 210 ctacaacatccagaaagagtcgaccctgcaccttgtcct 248
Score = 278 bits (140), Expect = 4e-72
Identities = 195/212 (91%), Gaps = 1/212 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||| ||||||||||||||||| || |||||||||||
Sbjct: 265 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagt 324
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatccc-cccgaccag 182
|| |||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 325 gacaccatcgaaaatgtgaaggccaagatccaggataaagaaggcatccctcccgaccag 384
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
|||||||||||||||||||||||||| |||||||||||| |||| | ||||| ||||||
Sbjct: 385 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 444
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
|||||||| |||||||||||||||||||||||
Sbjct: 445 atccagaaggagtcgaccctgcacctggtcct 476
Score = 262 bits (132), Expect = 2e-67
Identities = 193/212 (91%), Gaps = 1/212 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| ||| |||||||| ||||||||||||||||| ||| |||||||||||
Sbjct: 493 atgcagatcttcgtgaaaaccctgaccggcaagaccatcaccctggaggtggagcccagt 552
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcat-ccccccgaccag 182
|| |||||||| |||||||||||||||||||| |||||||| ||||| ||||||||||||
Sbjct: 553 gacaccatcgaaaatgtgaaggccaagatccaagataaagaaggcatcccccccgaccag 612
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
|||||||||||||||||||||||||| |||||||||||| |||| | ||||| ||||||
Sbjct: 613 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 672
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
|||||||| ||||| |||||||||||||||||
Sbjct: 673 atccagaaggagtcaaccctgcacctggtcct 704
>emb|Z54175.1|BVDTGACB1 Bovine viral diarrhea virus TGAC-B1 RNA
Length = 984
Score = 280 bits (141), Expect = 1e-72
Identities = 196/213 (92%), Gaps = 1/213 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||| ||||||||||||||||| ||| |||||||||||
Sbjct: 574 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 633
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
|| ||||||||||| ||||||||||||||||||||||| || ||||| ||||| ||||||
Sbjct: 634 gacaccatcgagaacgtgaaggccaagatccaggataaggaaggcattccccctgaccag 693
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
||||||||||||||||| |||||||| |||||||||||| |||| | ||||||||||||
Sbjct: 694 cagaggctcatctttgccggcaagcagctggaagatggccgcactctttctgattacaac 753
Query: 243 atccagaaagagtcgaccctgcacctggtcctc 275
|||||||||||||||||||||||||||||||||
Sbjct: 754 atccagaaagagtcgaccctgcacctggtcctc 786
Score = 56.0 bits (28), Expect = 3e-05
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 244 tccagaaagagtcgaccctgcacctggtcctc 275
|||||||||||||||||||||||| |||||||
Sbjct: 527 tccagaaagagtcgaccctgcacccggtcctc 558
>emb|Z54176.1|BVDCPA2 Bovine viral diarrhea virus cpA2 RNA
Length = 984
Score = 280 bits (141), Expect = 1e-72
Identities = 196/213 (92%), Gaps = 1/213 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||| ||||||||||||||||| ||| |||||||||||
Sbjct: 574 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 633
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
|| ||||||||||| ||||||||||||||||||||||| || ||||| ||||| ||||||
Sbjct: 634 gacaccatcgagaacgtgaaggccaagatccaggataaggaaggcattccccctgaccag 693
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
||||||||||||||||| |||||||| |||||||||||| |||| | ||||||||||||
Sbjct: 694 cagaggctcatctttgccggcaagcagctggaagatggccgcactctttctgattacaac 753
Query: 243 atccagaaagagtcgaccctgcacctggtcctc 275
|||||||||||||||||||||||||||||||||
Sbjct: 754 atccagaaagagtcgaccctgcacctggtcctc 786
Score = 56.0 bits (28), Expect = 3e-05
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 244 tccagaaagagtcgaccctgcacctggtcctc 275
|||||||||||||||||||||||| |||||||
Sbjct: 527 tccagaaagagtcgaccctgcacccggtcctc 558
>gb|M62429.1|BOVPOUBA Bovine polyubiquitin mRNA, 3' end, clone rpub2
Length = 636
Score = 280 bits (141), Expect = 1e-72
Identities = 196/213 (92%), Gaps = 1/213 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||| ||||||||||||||||| ||| |||||||||||
Sbjct: 35 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 94
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
|| ||||||||||| ||||||||||||||||||||||| || ||||| ||||| ||||||
Sbjct: 95 gacaccatcgagaacgtgaaggccaagatccaggataaggaaggcattccccctgaccag 154
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
||||||||||||||||| |||||||| |||||||||||| |||| | ||||||||||||
Sbjct: 155 cagaggctcatctttgccggcaagcagctggaagatggccgcactctttctgattacaac 214
Query: 243 atccagaaagagtcgaccctgcacctggtcctc 275
|||||||||||||||||||||||||||||||||
Sbjct: 215 atccagaaagagtcgaccctgcacctggtcctc 247
Score = 270 bits (136), Expect = 9e-70
Identities = 194/212 (91%), Gaps = 1/212 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||| ||||||||||||||||| || |||||||||||
Sbjct: 263 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagt 322
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
|| ||||||||||| ||||||||||||||||||||||| || ||||| ||||| ||||||
Sbjct: 323 gacaccatcgagaacgtgaaggccaagatccaggataaggaaggcattccccctgaccag 382
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
||||||||||||||||| |||||||| |||||||||||| |||| | ||||||||||||
Sbjct: 383 cagaggctcatctttgccggcaagcagctggaagatggccgcactctttctgattacaac 442
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
||||||||||||||||||||||||||||||||
Sbjct: 443 atccagaaagagtcgaccctgcacctggtcct 474
>gb|BC038999.1| Homo sapiens, ubiquitin B, clone IMAGE:4943285, mRNA
Length = 957
Score = 278 bits (140), Expect = 4e-72
Identities = 195/212 (91%), Gaps = 1/212 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||| ||||||||||||||||| || |||||||||||
Sbjct: 336 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagt 395
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatccc-cccgaccag 182
|| |||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 396 gacaccatcgaaaatgtgaaggccaagatccaggataaagaaggcatccctcccgaccag 455
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
|||||||||||||||||||||||||| |||||||||||| |||| | ||||| ||||||
Sbjct: 456 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 515
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
|||||||| |||||||||||||||||||||||
Sbjct: 516 atccagaaggagtcgaccctgcacctggtcct 547
Score = 278 bits (140), Expect = 4e-72
Identities = 195/212 (91%), Gaps = 1/212 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||| |||||||||||||| || ||| |||||||||||
Sbjct: 564 atgcagatcttcgtgaagaccctgaccggcaagaccatcactctggaggtggagcccagt 623
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
|| |||||||| |||||||||||||||||||| |||||||| ||||||||||| ||||||
Sbjct: 624 gacaccatcgaaaatgtgaaggccaagatccaagataaagaaggcatcccccccgaccag 683
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
|||||||||||||||||||||||||| |||||||||||| |||| | ||||| ||||||
Sbjct: 684 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 743
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
||||||||||||||||||||||||||||||||
Sbjct: 744 atccagaaagagtcgaccctgcacctggtcct 775
Score = 268 bits (135), Expect = 4e-69
Identities = 199/219 (90%), Gaps = 1/219 (0%)
Strand = Plus / Plus
Query: 57 ggtcaaaatgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatgga 116
|||||||||||| ||||||| ||| ||||| || ||||||||||||||||| ||| ||||
Sbjct: 101 ggtcaaaatgcagatcttcgtgaaaacccttaccggcaagaccatcacccttgaggtgga 160
Query: 117 gcccagtgaaaccatcgagaatgtgaaggccaagatccaggataaagagggcat-ccccc 175
||||||||| |||||||| |||||||||||||||||||||||||| || ||||| |||||
Sbjct: 161 gcccagtgacaccatcgaaaatgtgaaggccaagatccaggataaggaaggcattccccc 220
Query: 176 cgaccagcagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctga 235
||||||||||||||||||||||||||||||||| |||||||||||| | || | |||||
Sbjct: 221 cgaccagcagaggctcatctttgcaggcaagcagctggaagatggccgtactctttctga 280
Query: 236 ttacaacatccagaaagagtcgaccctgcacctggtcct 274
|||||||||||||| |||||||||||||||||||||||
Sbjct: 281 ctacaacatccagaaggagtcgaccctgcacctggtcct 319
>ref|NM_018955.2| Homo sapiens ubiquitin B (UBB), mRNA
Length = 971
Score = 278 bits (140), Expect = 4e-72
Identities = 195/212 (91%), Gaps = 1/212 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||| ||||||||||||||||| || |||||||||||
Sbjct: 367 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagt 426
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatccc-cccgaccag 182
|| |||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 427 gacaccatcgaaaatgtgaaggccaagatccaggataaagaaggcatccctcccgaccag 486
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
|||||||||||||||||||||||||| |||||||||||| |||| | ||||| ||||||
Sbjct: 487 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 546
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
|||||||| |||||||||||||||||||||||
Sbjct: 547 atccagaaggagtcgaccctgcacctggtcct 578
Score = 278 bits (140), Expect = 4e-72
Identities = 195/212 (91%), Gaps = 1/212 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||| |||||||||||||| || ||| |||||||||||
Sbjct: 595 atgcagatcttcgtgaagaccctgaccggcaagaccatcactctggaggtggagcccagt 654
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
|| |||||||| |||||||||||||||||||| |||||||| ||||||||||| ||||||
Sbjct: 655 gacaccatcgaaaatgtgaaggccaagatccaagataaagaaggcatcccccccgaccag 714
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
|||||||||||||||||||||||||| |||||||||||| |||| | ||||| ||||||
Sbjct: 715 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 774
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
||||||||||||||||||||||||||||||||
Sbjct: 775 atccagaaagagtcgaccctgcacctggtcct 806
Score = 268 bits (135), Expect = 4e-69
Identities = 199/219 (90%), Gaps = 1/219 (0%)
Strand = Plus / Plus
Query: 57 ggtcaaaatgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatgga 116
|||||||||||| ||||||| ||| ||||| || ||||||||||||||||| ||| ||||
Sbjct: 132 ggtcaaaatgcagatcttcgtgaaaacccttaccggcaagaccatcacccttgaggtgga 191
Query: 117 gcccagtgaaaccatcgagaatgtgaaggccaagatccaggataaagagggcat-ccccc 175
||||||||| |||||||| |||||||||||||||||||||||||| || ||||| |||||
Sbjct: 192 gcccagtgacaccatcgaaaatgtgaaggccaagatccaggataaggaaggcattccccc 251
Query: 176 cgaccagcagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctga 235
||||||||||||||||||||||||||||||||| |||||||||||| | || | |||||
Sbjct: 252 cgaccagcagaggctcatctttgcaggcaagcagctggaagatggccgtactctttctga 311
Query: 236 ttacaacatccagaaagagtcgaccctgcacctggtcct 274
|||||||||||||| |||||||||||||||||||||||
Sbjct: 312 ctacaacatccagaaggagtcgaccctgcacctggtcct 350
>gb|BC031027.1| Homo sapiens, clone MGC:32826 IMAGE:4715377, mRNA, complete cds
Length = 919
Score = 278 bits (140), Expect = 4e-72
Identities = 195/212 (91%), Gaps = 1/212 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||| ||||||||||||||||| || |||||||||||
Sbjct: 327 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagt 386
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatccc-cccgaccag 182
|| |||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 387 gacaccatcgaaaatgtgaaggccaagatccaggataaagaaggcatccctcccgaccag 446
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
|||||||||||||||||||||||||| |||||||||||| |||| | ||||| ||||||
Sbjct: 447 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 506
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
|||||||| |||||||||||||||||||||||
Sbjct: 507 atccagaaggagtcgaccctgcacctggtcct 538
Score = 278 bits (140), Expect = 4e-72
Identities = 195/212 (91%), Gaps = 1/212 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||| |||||||||||||| || ||| |||||||||||
Sbjct: 555 atgcagatcttcgtgaagaccctgaccggcaagaccatcactctggaggtggagcccagt 614
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
|| |||||||| |||||||||||||||||||| |||||||| ||||||||||| ||||||
Sbjct: 615 gacaccatcgaaaatgtgaaggccaagatccaagataaagaaggcatcccccccgaccag 674
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
|||||||||||||||||||||||||| |||||||||||| |||| | ||||| ||||||
Sbjct: 675 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 734
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
||||||||||||||||||||||||||||||||
Sbjct: 735 atccagaaagagtcgaccctgcacctggtcct 766
Score = 268 bits (135), Expect = 4e-69
Identities = 199/219 (90%), Gaps = 1/219 (0%)
Strand = Plus / Plus
Query: 57 ggtcaaaatgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatgga 116
|||||||||||| ||||||| ||| ||||| || ||||||||||||||||| ||| ||||
Sbjct: 92 ggtcaaaatgcagatcttcgtgaaaacccttaccggcaagaccatcacccttgaggtgga 151
Query: 117 gcccagtgaaaccatcgagaatgtgaaggccaagatccaggataaagagggcat-ccccc 175
||||||||| |||||||| |||||||||||||||||||||||||| || ||||| |||||
Sbjct: 152 gcccagtgacaccatcgaaaatgtgaaggccaagatccaggataaggaaggcattccccc 211
Query: 176 cgaccagcagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctga 235
||||||||||||||||||||||||||||||||| |||||||||||| | || | |||||
Sbjct: 212 cgaccagcagaggctcatctttgcaggcaagcagctggaagatggccgtactctttctga 271
Query: 236 ttacaacatccagaaagagtcgaccctgcacctggtcct 274
|||||||||||||| |||||||||||||||||||||||
Sbjct: 272 ctacaacatccagaaggagtcgaccctgcacctggtcct 310
>gb|BC026301.1| Homo sapiens, clone MGC:24729 IMAGE:4280629, mRNA, complete cds
Length = 957
Score = 278 bits (140), Expect = 4e-72
Identities = 195/212 (91%), Gaps = 1/212 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||| ||||||||||||||||| || |||||||||||
Sbjct: 325 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagt 384
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatccc-cccgaccag 182
|| |||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 385 gacaccatcgaaaatgtgaaggccaagatccaggataaagaaggcatccctcccgaccag 444
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
|||||||||||||||||||||||||| |||||||||||| |||| | ||||| ||||||
Sbjct: 445 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 504
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
|||||||| |||||||||||||||||||||||
Sbjct: 505 atccagaaggagtcgaccctgcacctggtcct 536
Score = 278 bits (140), Expect = 4e-72
Identities = 195/212 (91%), Gaps = 1/212 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||| |||||||||||||| || ||| |||||||||||
Sbjct: 553 atgcagatcttcgtgaagaccctgaccggcaagaccatcactctggaggtggagcccagt 612
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
|| |||||||| |||||||||||||||||||| |||||||| ||||||||||| ||||||
Sbjct: 613 gacaccatcgaaaatgtgaaggccaagatccaagataaagaaggcatcccccccgaccag 672
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
|||||||||||||||||||||||||| |||||||||||| |||| | ||||| ||||||
Sbjct: 673 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 732
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
||||||||||||||||||||||||||||||||
Sbjct: 733 atccagaaagagtcgaccctgcacctggtcct 764
Score = 268 bits (135), Expect = 4e-69
Identities = 199/219 (90%), Gaps = 1/219 (0%)
Strand = Plus / Plus
Query: 57 ggtcaaaatgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatgga 116
|||||||||||| ||||||| ||| ||||| || ||||||||||||||||| ||| ||||
Sbjct: 90 ggtcaaaatgcagatcttcgtgaaaacccttaccggcaagaccatcacccttgaggtgga 149
Query: 117 gcccagtgaaaccatcgagaatgtgaaggccaagatccaggataaagagggcat-ccccc 175
||||||||| |||||||| |||||||||||||||||||||||||| || ||||| |||||
Sbjct: 150 gcccagtgacaccatcgaaaatgtgaaggccaagatccaggataaggaaggcattccccc 209
Query: 176 cgaccagcagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctga 235
||||||||||||||||||||||||||||||||| |||||||||||| | || | |||||
Sbjct: 210 cgaccagcagaggctcatctttgcaggcaagcagctggaagatggccgtactctttctga 269
Query: 236 ttacaacatccagaaagagtcgaccctgcacctggtcct 274
|||||||||||||| |||||||||||||||||||||||
Sbjct: 270 ctacaacatccagaaggagtcgaccctgcacctggtcct 308
>gb|AC093484.2| Homo sapiens chromosome , clone RP11-138I1, complete sequence
Length = 170944
Score = 278 bits (140), Expect = 4e-72
Identities = 195/212 (91%), Gaps = 1/212 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||| ||||||||||||||||| || |||||||||||
Sbjct: 102925 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagt 102984
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatccc-cccgaccag 182
|| |||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 102985 gacaccatcgaaaatgtgaaggccaagatccaggataaagaaggcatccctcccgaccag 103044
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
|||||||||||||||||||||||||| |||||||||||| |||| | ||||| ||||||
Sbjct: 103045 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 103104
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
|||||||| |||||||||||||||||||||||
Sbjct: 103105 atccagaaggagtcgaccctgcacctggtcct 103136
Score = 278 bits (140), Expect = 4e-72
Identities = 195/212 (91%), Gaps = 1/212 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||| |||||||||||||| || ||| |||||||||||
Sbjct: 103153 atgcagatcttcgtgaagaccctgaccggcaagaccatcactctggaggtggagcccagt 103212
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
|| |||||||| |||||||||||||||||||| |||||||| ||||||||||| ||||||
Sbjct: 103213 gacaccatcgaaaatgtgaaggccaagatccaagataaagaaggcatcccccccgaccag 103272
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
|||||||||||||||||||||||||| |||||||||||| |||| | ||||| ||||||
Sbjct: 103273 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 103332
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
||||||||||||||||||||||||||||||||
Sbjct: 103333 atccagaaagagtcgaccctgcacctggtcct 103364
Score = 268 bits (135), Expect = 4e-69
Identities = 199/219 (90%), Gaps = 1/219 (0%)
Strand = Plus / Plus
Query: 57 ggtcaaaatgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatgga 116
|||||||||||| ||||||| ||| ||||| || ||||||||||||||||| ||| ||||
Sbjct: 102690 ggtcaaaatgcagatcttcgtgaaaacccttaccggcaagaccatcacccttgaggtgga 102749
Query: 117 gcccagtgaaaccatcgagaatgtgaaggccaagatccaggataaagagggcat-ccccc 175
||||||||| |||||||| |||||||||||||||||||||||||| || ||||| |||||
Sbjct: 102750 gcccagtgacaccatcgaaaatgtgaaggccaagatccaggataaggaaggcattccccc 102809
Query: 176 cgaccagcagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctga 235
||||||||||||||||||||||||||||||||| |||||||||||| | || | |||||
Sbjct: 102810 cgaccagcagaggctcatctttgcaggcaagcagctggaagatggccgtactctttctga 102869
Query: 236 ttacaacatccagaaagagtcgaccctgcacctggtcct 274
|||||||||||||| |||||||||||||||||||||||
Sbjct: 102870 ctacaacatccagaaggagtcgaccctgcacctggtcct 102908
>gb|BC015127.1|BC015127 Homo sapiens, clone MGC:24232 IMAGE:3929901, mRNA, complete cds
Length = 965
Score = 278 bits (140), Expect = 4e-72
Identities = 195/212 (91%), Gaps = 1/212 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||| ||||||||||||||||| || |||||||||||
Sbjct: 329 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagt 388
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatccc-cccgaccag 182
|| |||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 389 gacaccatcgaaaatgtgaaggccaagatccaggataaagaaggcatccctcccgaccag 448
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
|||||||||||||||||||||||||| |||||||||||| |||| | ||||| ||||||
Sbjct: 449 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 508
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
|||||||| |||||||||||||||||||||||
Sbjct: 509 atccagaaggagtcgaccctgcacctggtcct 540
Score = 278 bits (140), Expect = 4e-72
Identities = 195/212 (91%), Gaps = 1/212 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||| |||||||||||||| || ||| |||||||||||
Sbjct: 557 atgcagatcttcgtgaagaccctgaccggcaagaccatcactctggaggtggagcccagt 616
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
|| |||||||| |||||||||||||||||||| |||||||| ||||||||||| ||||||
Sbjct: 617 gacaccatcgaaaatgtgaaggccaagatccaagataaagaaggcatcccccccgaccag 676
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
|||||||||||||||||||||||||| |||||||||||| |||| | ||||| ||||||
Sbjct: 677 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 736
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
||||||||||||||||||||||||||||||||
Sbjct: 737 atccagaaagagtcgaccctgcacctggtcct 768
Score = 268 bits (135), Expect = 4e-69
Identities = 199/219 (90%), Gaps = 1/219 (0%)
Strand = Plus / Plus
Query: 57 ggtcaaaatgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatgga 116
|||||||||||| ||||||| ||| ||||| || ||||||||||||||||| ||| ||||
Sbjct: 94 ggtcaaaatgcagatcttcgtgaaaacccttaccggcaagaccatcacccttgaggtgga 153
Query: 117 gcccagtgaaaccatcgagaatgtgaaggccaagatccaggataaagagggcat-ccccc 175
||||||||| |||||||| |||||||||||||||||||||||||| || ||||| |||||
Sbjct: 154 gcccagtgacaccatcgaaaatgtgaaggccaagatccaggataaggaaggcattccccc 213
Query: 176 cgaccagcagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctga 235
||||||||||||||||||||||||||||||||| |||||||||||| | || | |||||
Sbjct: 214 cgaccagcagaggctcatctttgcaggcaagcagctggaagatggccgtactctttctga 273
Query: 236 ttacaacatccagaaagagtcgaccctgcacctggtcct 274
|||||||||||||| |||||||||||||||||||||||
Sbjct: 274 ctacaacatccagaaggagtcgaccctgcacctggtcct 312
>gb|BC009301.1|BC009301 Homo sapiens, clone MGC:16688 IMAGE:4126622, mRNA, complete cds
Length = 952
Score = 278 bits (140), Expect = 4e-72
Identities = 195/212 (91%), Gaps = 1/212 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||| ||||||||||||||||| || |||||||||||
Sbjct: 322 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagt 381
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatccc-cccgaccag 182
|| |||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 382 gacaccatcgaaaatgtgaaggccaagatccaggataaagaaggcatccctcccgaccag 441
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
|||||||||||||||||||||||||| |||||||||||| |||| | ||||| ||||||
Sbjct: 442 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 501
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
|||||||| |||||||||||||||||||||||
Sbjct: 502 atccagaaggagtcgaccctgcacctggtcct 533
Score = 278 bits (140), Expect = 4e-72
Identities = 195/212 (91%), Gaps = 1/212 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||| |||||||||||||| || ||| |||||||||||
Sbjct: 550 atgcagatcttcgtgaagaccctgaccggcaagaccatcactctggaggtggagcccagt 609
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
|| |||||||| |||||||||||||||||||| |||||||| ||||||||||| ||||||
Sbjct: 610 gacaccatcgaaaatgtgaaggccaagatccaagataaagaaggcatcccccccgaccag 669
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
|||||||||||||||||||||||||| |||||||||||| |||| | ||||| ||||||
Sbjct: 670 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 729
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
||||||||||||||||||||||||||||||||
Sbjct: 730 atccagaaagagtcgaccctgcacctggtcct 761
Score = 268 bits (135), Expect = 4e-69
Identities = 199/219 (90%), Gaps = 1/219 (0%)
Strand = Plus / Plus
Query: 57 ggtcaaaatgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatgga 116
|||||||||||| ||||||| ||| ||||| || ||||||||||||||||| ||| ||||
Sbjct: 87 ggtcaaaatgcagatcttcgtgaaaacccttaccggcaagaccatcacccttgaggtgga 146
Query: 117 gcccagtgaaaccatcgagaatgtgaaggccaagatccaggataaagagggcat-ccccc 175
||||||||| |||||||| |||||||||||||||||||||||||| || ||||| |||||
Sbjct: 147 gcccagtgacaccatcgaaaatgtgaaggccaagatccaggataaggaaggcattccccc 206
Query: 176 cgaccagcagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctga 235
||||||||||||||||||||||||||||||||| |||||||||||| | || | |||||
Sbjct: 207 cgaccagcagaggctcatctttgcaggcaagcagctggaagatggccgtactctttctga 266
Query: 236 ttacaacatccagaaagagtcgaccctgcacctggtcct 274
|||||||||||||| |||||||||||||||||||||||
Sbjct: 267 ctacaacatccagaaggagtcgaccctgcacctggtcct 305
>gb|BC000379.1|BC000379 Homo sapiens, ubiquitin B, clone MGC:8385 IMAGE:2820408, mRNA,
complete cds
Length = 998
Score = 278 bits (140), Expect = 4e-72
Identities = 195/212 (91%), Gaps = 1/212 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||| ||||||||||||||||| || |||||||||||
Sbjct: 376 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagt 435
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatccc-cccgaccag 182
|| |||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 436 gacaccatcgaaaatgtgaaggccaagatccaggataaagaaggcatccctcccgaccag 495
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
|||||||||||||||||||||||||| |||||||||||| |||| | ||||| ||||||
Sbjct: 496 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 555
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
|||||||| |||||||||||||||||||||||
Sbjct: 556 atccagaaggagtcgaccctgcacctggtcct 587
Score = 278 bits (140), Expect = 4e-72
Identities = 195/212 (91%), Gaps = 1/212 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||| |||||||||||||| || ||| |||||||||||
Sbjct: 604 atgcagatcttcgtgaagaccctgaccggcaagaccatcactctggaggtggagcccagt 663
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
|| |||||||| |||||||||||||||||||| |||||||| ||||||||||| ||||||
Sbjct: 664 gacaccatcgaaaatgtgaaggccaagatccaagataaagaaggcatcccccccgaccag 723
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
|||||||||||||||||||||||||| |||||||||||| |||| | ||||| ||||||
Sbjct: 724 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 783
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
||||||||||||||||||||||||||||||||
Sbjct: 784 atccagaaagagtcgaccctgcacctggtcct 815
Score = 260 bits (131), Expect = 9e-67
Identities = 198/219 (90%), Gaps = 1/219 (0%)
Strand = Plus / Plus
Query: 57 ggtcaaaatgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatgga 116
|||||||||||| ||||||| ||| ||||| || ||||||||||||||||| ||| ||||
Sbjct: 141 ggtcaaaatgcagatcttcgtgaaaacccttaccggcaagaccatcacccttgaggtgga 200
Query: 117 gcccagtgaaaccatcgagaatgtgaaggccaagatccaggataaagagggca-tccccc 175
||||||||| |||||||| |||||||||||||||||||||||||| || |||| ||||||
Sbjct: 201 gcccagtgacaccatcgaaaatgtgaaggccaagatccaggataaggaaggcattccccc 260
Query: 176 cgaccagcagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctga 235
||||||||||||||||||||||||||||||||| |||||||| ||| | || | |||||
Sbjct: 261 cgaccagcagaggctcatctttgcaggcaagcagctggaagacggccgtactctttctga 320
Query: 236 ttacaacatccagaaagagtcgaccctgcacctggtcct 274
|||||||||||||| |||||||||||||||||||||||
Sbjct: 321 ctacaacatccagaaggagtcgaccctgcacctggtcct 359
>emb|X04803.2|HSYUBG1 Homo sapiens ubiquitin gene
Length = 3107
Score = 278 bits (140), Expect = 4e-72
Identities = 195/212 (91%), Gaps = 1/212 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||| ||||||||||||||||| || |||||||||||
Sbjct: 2311 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagt 2370
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatccc-cccgaccag 182
|| |||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 2371 gacaccatcgaaaatgtgaaggccaagatccaggataaagaaggcatccctcccgaccag 2430
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
|||||||||||||||||||||||||| |||||||||||| |||| | ||||| ||||||
Sbjct: 2431 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 2490
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
|||||||| |||||||||||||||||||||||
Sbjct: 2491 atccagaaggagtcgaccctgcacctggtcct 2522
Score = 268 bits (135), Expect = 4e-69
Identities = 199/219 (90%), Gaps = 1/219 (0%)
Strand = Plus / Plus
Query: 57 ggtcaaaatgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatgga 116
|||||||||||| ||||||| ||| ||||| || ||||||||||||||||| ||| ||||
Sbjct: 2076 ggtcaaaatgcagatcttcgtgaaaacccttaccggcaagaccatcacccttgaggtgga 2135
Query: 117 gcccagtgaaaccatcgagaatgtgaaggccaagatccaggataaagagggcat-ccccc 175
||||||||| |||||||| |||||||||||||||||||||||||| || ||||| |||||
Sbjct: 2136 gcccagtgacaccatcgaaaatgtgaaggccaagatccaggataaggaaggcattccccc 2195
Query: 176 cgaccagcagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctga 235
||||||||||||||||||||||||||||||||| |||||||||||| | || | |||||
Sbjct: 2196 cgaccagcagaggctcatctttgcaggcaagcagctggaagatggccgtactctttctga 2255
Query: 236 ttacaacatccagaaagagtcgaccctgcacctggtcct 274
|||||||||||||| |||||||||||||||||||||||
Sbjct: 2256 ctacaacatccagaaggagtcgaccctgcacctggtcct 2294
Score = 262 bits (132), Expect = 2e-67
Identities = 193/212 (91%), Gaps = 1/212 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||| |||||||||||||| || || |||||||||||
Sbjct: 2539 atgcagatcttcgtgaagaccctgaccggcaagaccatcactctggaagtggagcccagt 2598
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatccc-cccgaccag 182
|| |||||||| |||||||||||||||||||| |||||||| |||||||| |||||||||
Sbjct: 2599 gacaccatcgaaaatgtgaaggccaagatccaagataaagaaggcatccctcccgaccag 2658
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
|||||||||||||||||||||||||| |||||||||||| |||| | ||||| ||||||
Sbjct: 2659 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 2718
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
|||||||| |||||||||||||||||||||||
Sbjct: 2719 atccagaaggagtcgaccctgcacctggtcct 2750
>emb|AL356460.3|HS84M10 Homo sapiens chromosome 17 from PAC 84M10 map17p11.2 region
D17S842-D17S953, complete sequence
Length = 161943
Score = 278 bits (140), Expect = 4e-72
Identities = 195/212 (91%), Gaps = 1/212 (0%)
Strand = Plus / Minus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||| ||||||||||||||||| || |||||||||||
Sbjct: 7361 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagt 7302
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatccc-cccgaccag 182
|| |||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 7301 gacaccatcgaaaatgtgaaggccaagatccaggataaagaaggcatccctcccgaccag 7242
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
|||||||||||||||||||||||||| |||||||||||| |||| | ||||| ||||||
Sbjct: 7241 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 7182
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
|||||||| |||||||||||||||||||||||
Sbjct: 7181 atccagaaggagtcgaccctgcacctggtcct 7150
Score = 278 bits (140), Expect = 4e-72
Identities = 195/212 (91%), Gaps = 1/212 (0%)
Strand = Plus / Minus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||| |||||||||||||| || ||| |||||||||||
Sbjct: 7133 atgcagatcttcgtgaagaccctgaccggcaagaccatcactctggaggtggagcccagt 7074
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
|| |||||||| |||||||||||||||||||| |||||||| ||||||||||| ||||||
Sbjct: 7073 gacaccatcgaaaatgtgaaggccaagatccaagataaagaaggcatcccccccgaccag 7014
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
|||||||||||||||||||||||||| |||||||||||| |||| | ||||| ||||||
Sbjct: 7013 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 6954
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
||||||||||||||||||||||||||||||||
Sbjct: 6953 atccagaaagagtcgaccctgcacctggtcct 6922
Score = 268 bits (135), Expect = 4e-69
Identities = 199/219 (90%), Gaps = 1/219 (0%)
Strand = Plus / Minus
Query: 57 ggtcaaaatgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatgga 116
|||||||||||| ||||||| ||| ||||| || ||||||||||||||||| ||| ||||
Sbjct: 7596 ggtcaaaatgcagatcttcgtgaaaacccttaccggcaagaccatcacccttgaggtgga 7537
Query: 117 gcccagtgaaaccatcgagaatgtgaaggccaagatccaggataaagagggcat-ccccc 175
||||||||| |||||||| |||||||||||||||||||||||||| || ||||| |||||
Sbjct: 7536 gcccagtgacaccatcgaaaatgtgaaggccaagatccaggataaggaaggcattccccc 7477
Query: 176 cgaccagcagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctga 235
||||||||||||||||||||||||||||||||| |||||||||||| | || | |||||
Sbjct: 7476 cgaccagcagaggctcatctttgcaggcaagcagctggaagatggccgtactctttctga 7417
Query: 236 ttacaacatccagaaagagtcgaccctgcacctggtcct 274
|||||||||||||| |||||||||||||||||||||||
Sbjct: 7416 ctacaacatccagaaggagtcgaccctgcacctggtcct 7378
>gb|AC068902.20| Mus musculus clone rp23-151l10, complete sequence
Length = 199514
Score = 276 bits (139), Expect = 2e-71
Identities = 199/219 (90%)
Strand = Plus / Minus
Query: 57 ggtcaaaatgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatgga 116
|||||||||||| |||||| || ||||||||||||||||||| ||||| ||||| ||||
Sbjct: 191585 ggtcaaaatgcagatcttcacgacgaccctgactggcaagaccctcaccttagaggtgga 191526
Query: 117 gcccagtgaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc 176
||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 191525 gcccagtgacaccatcgagaacgtgaaggccaagatccaggataaagagggcatccccct 191466
Query: 177 gaccagcagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgat 236
|||||||||||||| |||||||| |||||||| || ||||||||| |||| ||||||||
Sbjct: 191465 gaccagcagaggctgatctttgctggcaagcagctagaagatggccgcactctctctgat 191406
Query: 237 tacaacatccagaaagagtcgaccctgcacctggtcctc 275
||||||||||||||||||| |||||||||||||||||
Sbjct: 191405 tacaacatccagaaagagtgagccctgcacctggtcctc 191367
>gb|BC014367.1|BC014367 Homo sapiens, Similar to orosomucoid 1, clone MGC:24263
IMAGE:3934516, mRNA, complete cds
Length = 790
Score = 276 bits (139), Expect = 2e-71
Identities = 200/219 (91%), Gaps = 1/219 (0%)
Strand = Plus / Plus
Query: 57 ggtcaaaatgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatgga 116
|||||||||||| ||||||| ||| ||||| || ||||||||||||||||| ||| ||||
Sbjct: 100 ggtcaaaatgcagatcttcgtgaaaacccttaccggcaagaccatcacccttgaggtgga 159
Query: 117 gcccagtgaaaccatcgagaatgtgaaggccaagatccaggataaagagggcat-ccccc 175
||||||||| |||||||| |||||||||||||||||||||||||| || ||||| |||||
Sbjct: 160 gcccagtgacaccatcgaaaatgtgaaggccaagatccaggataaggaaggcattccccc 219
Query: 176 cgaccagcagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctga 235
||||||||||||||||||||||||||||||||| |||||||||||| |||| | |||||
Sbjct: 220 cgaccagcagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctga 279
Query: 236 ttacaacatccagaaagagtcgaccctgcacctggtcct 274
|||||||||||||| |||||||||||||||||||||||
Sbjct: 280 ctacaacatccagaaggagtcgaccctgcacctggtcct 318
>emb|AL603923.7| Mouse DNA sequence from clone RP23-180L15 on chromosome 11, complete
sequence
Length = 141596
Score = 276 bits (139), Expect = 2e-71
Identities = 199/219 (90%)
Strand = Plus / Plus
Query: 57 ggtcaaaatgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatgga 116
|||||||||||| |||||| || ||||||||||||||||||| ||||| ||||| ||||
Sbjct: 74964 ggtcaaaatgcagatcttcacgacgaccctgactggcaagaccctcaccttagaggtgga 75023
Query: 117 gcccagtgaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc 176
||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 75024 gcccagtgacaccatcgagaacgtgaaggccaagatccaggataaagagggcatccccct 75083
Query: 177 gaccagcagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgat 236
|||||||||||||| |||||||| |||||||| || ||||||||| |||| ||||||||
Sbjct: 75084 gaccagcagaggctgatctttgctggcaagcagctagaagatggccgcactctctctgat 75143
Query: 237 tacaacatccagaaagagtcgaccctgcacctggtcctc 275
||||||||||||||||||| |||||||||||||||||
Sbjct: 75144 tacaacatccagaaagagtgagccctgcacctggtcctc 75182
>gb|M62431.1|BVDCP1 Bovine viral diarrhea virus CP1 putative helcase/protease mRNA,
partial cds
Length = 5688
Score = 270 bits (136), Expect = 9e-70
Identities = 194/212 (91%), Gaps = 1/212 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||| ||||||||||||||||| || |||||||||||
Sbjct: 2968 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagt 3027
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
|| ||||||||||| ||||||||||||||||||||||| || ||||| ||||| ||||||
Sbjct: 3028 gacaccatcgagaacgtgaaggccaagatccaggataaggaaggcattccccctgaccag 3087
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
||||||||||||||||| |||||||| |||||||||||| |||| | ||||||||||||
Sbjct: 3088 cagaggctcatctttgccggcaagcagctggaagatggccgcactctttctgattacaac 3147
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
||||||||||||||||||||||||||||||||
Sbjct: 3148 atccagaaagagtcgaccctgcacctggtcct 3179
Score = 159 bits (80), Expect = 2e-36
Identities = 114/124 (91%), Gaps = 1/124 (0%)
Strand = Plus / Plus
Query: 153 ccaggataaagagggcatcccccc-gaccagcagaggctcatctttgcaggcaagcaact 211
||||||||| || ||||| ||||| ||||||||||||||||||||||| |||||||| ||
Sbjct: 2829 ccaggataaggaaggcattccccctgaccagcagaggctcatctttgccggcaagcagct 2888
Query: 212 ggaagatggctgcaccttctctgattacaacatccagaaagagtcgaccctgcacctggt 271
|||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 2889 ggaagatggccgcactctttctgattacaacatccagaaagagtcgaccctgcacctggt 2948
Query: 272 cctc 275
||||
Sbjct: 2949 cctc 2952
>gb|AC087575.11| Homo sapiens chromosome 17, clone RP11-305L6, complete sequence
Length = 198756
Score = 268 bits (135), Expect = 4e-69
Identities = 192/211 (90%)
Strand = Plus / Minus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||| ||||||||||||||||| || |||||||||||
Sbjct: 167602 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagt 167543
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatccccccgaccagc 183
|| |||||||| |||||||||||||||||||| |||||||| ||||||||||||| ||||
Sbjct: 167542 gacaccatcgaaaatgtgaaggccaagatccaagataaagaaggcatccccccgatcagc 167483
Query: 184 agaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaaca 243
||||||||||||||||||||||||| |||||||||||| | || | ||||| |||||||
Sbjct: 167482 agaggctcatctttgcaggcaagcagctggaagatggcggtactctttctgactacaaca 167423
Query: 244 tccagaaagagtcgaccctgcacctggtcct 274
||||||| |||||||||||||||||||||||
Sbjct: 167422 tccagaaggagtcgaccctgcacctggtcct 167392
Score = 262 bits (132), Expect = 2e-67
Identities = 193/212 (91%), Gaps = 1/212 (0%)
Strand = Plus / Minus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||| ||||||||||||||||| || |||||||||||
Sbjct: 167830 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagt 167771
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcat-ccccccgaccag 182
|| |||||||| |||||||||||||||||||| |||||||| ||||| ||||||||||||
Sbjct: 167770 gacaccatcgaaaatgtgaaggccaagatccaagataaagaaggcatcccccccgaccag 167711
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
|||||||||||||||||||||||||| |||||||||||| ||| | ||||| ||||||
Sbjct: 167710 cagaggctcatctttgcaggcaagcagctggaagatggccgcagtctttctgactacaac 167651
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
||||||||||||||||||||||| ||||||||
Sbjct: 167650 atccagaaagagtcgaccctgcatctggtcct 167619
Score = 242 bits (122), Expect = 2e-61
Identities = 186/206 (90%), Gaps = 1/206 (0%)
Strand = Plus / Minus
Query: 70 atcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagtgaaacc 129
||||||| ||||||||||||||| |||||||||||||| ||| ||||||||||||| |||
Sbjct: 167369 atcttcgtgaagaccctgactggaaagaccatcaccctggaggtggagcccagtgacacc 167310
Query: 130 atcgagaatgtgaaggccaagatccaggataaagagggcat-ccccccgaccagcagagg 188
||||| |||||||| ||||||||||||||| |||| ||||| |||||||| |||||||||
Sbjct: 167309 atcgaaaatgtgaaagccaagatccaggatgaagaaggcatcccccccgatcagcagagg 167250
Query: 189 ctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaacatccag 248
|||||||||||||||||| | ||||||||||| |||| | ||||| |||| |||||||
Sbjct: 167249 ctcatctttgcaggcaagaagttggaagatggccgcactctttctgactacagcatccag 167190
Query: 249 aaagagtcgaccctgcacctggtcct 274
||||||||||||||||||||||||||
Sbjct: 167189 aaagagtcgaccctgcacctggtcct 167164
Score = 172 bits (87), Expect = 2e-40
Identities = 187/219 (85%), Gaps = 1/219 (0%)
Strand = Plus / Minus
Query: 57 ggtcaaaatgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatgga 116
||||||||||| ||||||| ||| ||||| || ||||||| ||||||||| || ||||
Sbjct: 168065 ggtcaaaatgcggatcttcgtgaaaacccttaccggcaagatcatcacccttgaagtgga 168006
Query: 117 gcccagtgaaaccatcgagaatgtgaaggccaagatccaggataaagagggca-tccccc 175
|||||||| || ||||| ||||| || ||||| ||||| |||||||| |||| ||||
Sbjct: 168005 gcccagtgccactatcgaaaatgtcaaagccaaaatccaagataaagaaggcaatccctg 167946
Query: 176 cgaccagcagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctga 235
|||||||||||||||||||||||||||||||| | |||||||||| ||| | |||||
Sbjct: 167945 tgaccagcagaggctcatctttgcaggcaagcagcgggaagatggccgcagtctttctga 167886
Query: 236 ttacaacatccagaaagagtcgaccctgcacctggtcct 274
||||||||||||||||||||||||||||| ||||||||
Sbjct: 167885 ctacaacatccagaaagagtcgaccctgcatctggtcct 167847
>ref|XM_170833.1| Homo sapiens similar to polyubiquitin (UBQ10) (LOC254746), mRNA
Length = 1153
Score = 268 bits (135), Expect = 4e-69
Identities = 192/211 (90%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||| ||||||||||||||||| || |||||||||||
Sbjct: 552 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagt 611
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatccccccgaccagc 183
|| |||||||| |||||||||||||||||||| |||||||| ||||||||||||| ||||
Sbjct: 612 gacaccatcgaaaatgtgaaggccaagatccaagataaagaaggcatccccccgatcagc 671
Query: 184 agaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaaca 243
||||||||||||||||||||||||| |||||||||||| | || | ||||| |||||||
Sbjct: 672 agaggctcatctttgcaggcaagcagctggaagatggcggtactctttctgactacaaca 731
Query: 244 tccagaaagagtcgaccctgcacctggtcct 274
||||||| |||||||||||||||||||||||
Sbjct: 732 tccagaaggagtcgaccctgcacctggtcct 762
Score = 262 bits (132), Expect = 2e-67
Identities = 193/212 (91%), Gaps = 1/212 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||| ||||||||||||||||| || |||||||||||
Sbjct: 324 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagt 383
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcat-ccccccgaccag 182
|| |||||||| |||||||||||||||||||| |||||||| ||||| ||||||||||||
Sbjct: 384 gacaccatcgaaaatgtgaaggccaagatccaagataaagaaggcatcccccccgaccag 443
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
|||||||||||||||||||||||||| |||||||||||| ||| | ||||| ||||||
Sbjct: 444 cagaggctcatctttgcaggcaagcagctggaagatggccgcagtctttctgactacaac 503
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
||||||||||||||||||||||| ||||||||
Sbjct: 504 atccagaaagagtcgaccctgcatctggtcct 535
Score = 242 bits (122), Expect = 2e-61
Identities = 186/206 (90%), Gaps = 1/206 (0%)
Strand = Plus / Plus
Query: 70 atcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagtgaaacc 129
||||||| ||||||||||||||| |||||||||||||| ||| ||||||||||||| |||
Sbjct: 785 atcttcgtgaagaccctgactggaaagaccatcaccctggaggtggagcccagtgacacc 844
Query: 130 atcgagaatgtgaaggccaagatccaggataaagagggcat-ccccccgaccagcagagg 188
||||| |||||||| ||||||||||||||| |||| ||||| |||||||| |||||||||
Sbjct: 845 atcgaaaatgtgaaagccaagatccaggatgaagaaggcatcccccccgatcagcagagg 904
Query: 189 ctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaacatccag 248
|||||||||||||||||| | ||||||||||| |||| | ||||| |||| |||||||
Sbjct: 905 ctcatctttgcaggcaagaagttggaagatggccgcactctttctgactacagcatccag 964
Query: 249 aaagagtcgaccctgcacctggtcct 274
||||||||||||||||||||||||||
Sbjct: 965 aaagagtcgaccctgcacctggtcct 990
Score = 172 bits (87), Expect = 2e-40
Identities = 187/219 (85%), Gaps = 1/219 (0%)
Strand = Plus / Plus
Query: 57 ggtcaaaatgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatgga 116
||||||||||| ||||||| ||| ||||| || ||||||| ||||||||| || ||||
Sbjct: 89 ggtcaaaatgcggatcttcgtgaaaacccttaccggcaagatcatcacccttgaagtgga 148
Query: 117 gcccagtgaaaccatcgagaatgtgaaggccaagatccaggataaagagggca-tccccc 175
|||||||| || ||||| ||||| || ||||| ||||| |||||||| |||| ||||
Sbjct: 149 gcccagtgccactatcgaaaatgtcaaagccaaaatccaagataaagaaggcaatccctg 208
Query: 176 cgaccagcagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctga 235
|||||||||||||||||||||||||||||||| | |||||||||| ||| | |||||
Sbjct: 209 tgaccagcagaggctcatctttgcaggcaagcagcgggaagatggccgcagtctttctga 268
Query: 236 ttacaacatccagaaagagtcgaccctgcacctggtcct 274
||||||||||||||||||||||||||||| ||||||||
Sbjct: 269 ctacaacatccagaaagagtcgaccctgcatctggtcct 307
>gb|M96687.1|BVDPP Bovine viral diarrhea virus polyprotein gene, complete cds
Length = 12480
Score = 262 bits (132), Expect = 2e-67
Identities = 196/216 (90%), Gaps = 1/216 (0%)
Strand = Plus / Plus
Query: 61 aaaatgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagccc 120
|||||||| ||||||| ||| |||||||| |||| |||||||||||| ||| ||||||||
Sbjct: 5151 aaaatgcagatcttcgtgaaaaccctgaccggcaggaccatcaccctggaggtggagccc 5210
Query: 121 agtgaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gac 179
||||| ||||||||||| ||||||||||||||||||||||| || ||||| ||||| |||
Sbjct: 5211 agtgacaccatcgagaacgtgaaggccaagatccaggataaggaaggcattccccctgac 5270
Query: 180 cagcagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattac 239
|||||||||||||||||||| |||||||| |||||||||||| || | | |||||||||
Sbjct: 5271 cagcagaggctcatctttgccggcaagcagctggaagatggccgctctctttctgattac 5330
Query: 240 aacatccagaaagagtcgaccctgcacctggtcctc 275
||||||||||||||||||||||||||||||||||||
Sbjct: 5331 aacatccagaaagagtcgaccctgcacctggtcctc 5366
>ref|NG_002287.1| Homo sapiens ubiquitin B pseudogene 2 (UBBP2) on chromosome 1
Length = 647
Score = 258 bits (130), Expect = 4e-66
Identities = 197/218 (90%), Gaps = 1/218 (0%)
Strand = Plus / Plus
Query: 57 ggtcaaaatgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatgga 116
|||||||||||| ||||||| |||||||||||||||||||||||||||||| || ||||
Sbjct: 181 ggtcaaaatgcagatcttcgtgaagaccctgactggcaagaccatcacccttgaagtgga 240
Query: 117 gcccagtgaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcc-ccc 175
||||||||| |||||||| |||||||||||||| ||||||||||| || ||||||| |||
Sbjct: 241 gcccagtgacaccatcgaaaatgtgaaggccaatatccaggataaggaaggcatcctccc 300
Query: 176 cgaccagcagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctga 235
||||||||||||||||||||||||||||| ||| || ||||||||||| || | |||||
Sbjct: 301 cgaccagcagaggctcatctttgcaggcatgcagctagaagatggctgtactctttctga 360
Query: 236 ttacaacatccagaaagagtcgaccctgcacctggtcc 273
||||||||||||||||||| ||||||| |||||||||
Sbjct: 361 ctacaacatccagaaagagttgaccctgtacctggtcc 398
>emb|X04802.1|HSUBPSE2 Homo sapiens UBBP2 pseudogene for ubiquitin UBB
Length = 647
Score = 258 bits (130), Expect = 4e-66
Identities = 197/218 (90%), Gaps = 1/218 (0%)
Strand = Plus / Plus
Query: 57 ggtcaaaatgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatgga 116
|||||||||||| ||||||| |||||||||||||||||||||||||||||| || ||||
Sbjct: 181 ggtcaaaatgcagatcttcgtgaagaccctgactggcaagaccatcacccttgaagtgga 240
Query: 117 gcccagtgaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcc-ccc 175
||||||||| |||||||| |||||||||||||| ||||||||||| || ||||||| |||
Sbjct: 241 gcccagtgacaccatcgaaaatgtgaaggccaatatccaggataaggaaggcatcctccc 300
Query: 176 cgaccagcagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctga 235
||||||||||||||||||||||||||||| ||| || ||||||||||| || | |||||
Sbjct: 301 cgaccagcagaggctcatctttgcaggcatgcagctagaagatggctgtactctttctga 360
Query: 236 ttacaacatccagaaagagtcgaccctgcacctggtcc 273
||||||||||||||||||| ||||||| |||||||||
Sbjct: 361 ctacaacatccagaaagagttgaccctgtacctggtcc 398
>gb|M87812.1|BVDMSEQH Bovine viral diarrhea virus mRNA sequence
Length = 768
Score = 254 bits (128), Expect = 6e-65
Identities = 192/212 (90%), Gaps = 1/212 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||| ||||||||||||||||| || |||||||||||
Sbjct: 282 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagt 341
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
|| ||||||||||| ||||||||||||||||||||||| || ||||| ||||| ||||||
Sbjct: 342 gacaccatcgagaacgtgaaggccaagatccaggataaggaaggcattccccctgaccag 401
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
|||||||| | |||||| |||||||| |||||||||||| |||| | ||||||||||||
Sbjct: 402 cagaggcttacctttgccggcaagcagctggaagatggccgcactctttctgattacaac 461
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
||||||||||||||||||||||||||||||||
Sbjct: 462 atccagaaagagtcgaccctgcacctggtcct 493
Score = 56.0 bits (28), Expect = 3e-05
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 248 gaaagagtcgaccctgcacctggtcctc 275
||||||||||||||||||||||||||||
Sbjct: 239 gaaagagtcgaccctgcacctggtcctc 266
>gb|AF285161.1|AF285161 Mus musculus cell-line C3H/He polyubiquitin C (Ubc) gene, complete
cds
Length = 3756
Score = 246 bits (124), Expect = 1e-62
Identities = 191/212 (90%), Gaps = 1/212 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||| | |||||||||||| ||||||||||||||||| ||| |||||||||||
Sbjct: 3067 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtggagcccagt 3126
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
|| ||||| |||||||| ||||| ||||||||||| || |||||||||||||| ||||||
Sbjct: 3127 gacaccattgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 3186
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
|||||||| ||||||||||||||||| |||||||||||| ||||| | || || ||||||
Sbjct: 3187 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 3246
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
|||||||||||||| |||||||||||||||||
Sbjct: 3247 atccagaaagagtccaccctgcacctggtcct 3278
Score = 246 bits (124), Expect = 1e-62
Identities = 191/212 (90%), Gaps = 1/212 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||| | |||||||||||| ||||||||||||||||| ||| |||||||||||
Sbjct: 3295 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtggagcccagt 3354
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
|| ||||| |||||||| ||||| ||||||||||| || |||||||||||||| ||||||
Sbjct: 3355 gacaccattgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 3414
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
|||||||| ||||||||||||||||| |||||||||||| ||||| | || || ||||||
Sbjct: 3415 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 3474
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
|||||||||||||| |||||||||||||||||
Sbjct: 3475 atccagaaagagtccaccctgcacctggtcct 3506
Score = 246 bits (124), Expect = 1e-62
Identities = 191/212 (90%), Gaps = 1/212 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||| | |||||||||||| ||||||||||||||||| ||| |||||||||||
Sbjct: 2611 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtggagcccagt 2670
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
|| ||||| |||||||| ||||| ||||||||||| || |||||||||||||| ||||||
Sbjct: 2671 gacaccattgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 2730
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
|||||||| ||||||||||||||||| |||||||||||| ||||| | || || ||||||
Sbjct: 2731 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 2790
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
|||||||||||||| |||||||||||||||||
Sbjct: 2791 atccagaaagagtccaccctgcacctggtcct 2822
Score = 238 bits (120), Expect = 3e-60
Identities = 190/212 (89%), Gaps = 1/212 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||| | |||||||||||| ||||||||||||||||| ||| | |||||||||
Sbjct: 1699 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 1758
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
|| ||||| |||||||| ||||| ||||||||||| || |||||||||||||| ||||||
Sbjct: 1759 gacaccattgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 1818
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
|||||||| ||||||||||||||||| |||||||||||| ||||| | || || ||||||
Sbjct: 1819 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 1878
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
|||||||||||||| |||||||||||||||||
Sbjct: 1879 atccagaaagagtccaccctgcacctggtcct 1910
Score = 238 bits (120), Expect = 3e-60
Identities = 190/212 (89%), Gaps = 1/212 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||| | |||||||||||| ||||||||||||||||| ||| | |||||||||
Sbjct: 2839 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 2898
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
|| ||||| |||||||| ||||| ||||||||||| || |||||||||||||| ||||||
Sbjct: 2899 gacaccattgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 2958
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
|||||||| ||||||||||||||||| |||||||||||| ||||| | || || ||||||
Sbjct: 2959 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 3018
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
|||||||||||||| |||||||||||||||||
Sbjct: 3019 atccagaaagagtccaccctgcacctggtcct 3050
Score = 230 bits (116), Expect = 8e-58
Identities = 189/212 (89%), Gaps = 1/212 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||| | ||| |||||||| ||||||||||||||||| ||| | |||||||||
Sbjct: 2383 atgcagatctttgtgaaaaccctgacaggcaagaccatcaccctggaggtcgagcccagt 2442
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
|| ||||| |||||||| ||||| ||||||||||| || |||||||||||||| ||||||
Sbjct: 2443 gacaccatagagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 2502
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
|||||||| ||||||||||||||||| |||||||||||| ||||| | || || ||||||
Sbjct: 2503 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 2562
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
|||||||||||||| |||||||||||||||||
Sbjct: 2563 atccagaaagagtccaccctgcacctggtcct 2594
Score = 230 bits (116), Expect = 8e-58
Identities = 189/212 (89%), Gaps = 1/212 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||| | |||||||||||| ||||||||||||||||| ||| | |||||||||
Sbjct: 2155 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 2214
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
|| ||||| |||||||| ||||| ||||||||||| || ||||||||| |||| ||||||
Sbjct: 2215 gacaccatagagaatgtcaaggcaaagatccaggacaaggagggcatctcccctgaccag 2274
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
|||||||| ||||||||||||||||| |||||||||||| ||||| | || || ||||||
Sbjct: 2275 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 2334
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
|||||||||||||| |||||||||||||||||
Sbjct: 2335 atccagaaagagtccaccctgcacctggtcct 2366
Score = 230 bits (116), Expect = 8e-58
Identities = 189/212 (89%), Gaps = 1/212 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||| | |||||||||||| ||||||||||||||||| ||| | |||||||||
Sbjct: 1927 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 1986
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccc-gaccag 182
|| || || |||||||| ||||| ||||||||||| || |||||||||||||| ||||||
Sbjct: 1987 gacactatagagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 2046
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
|||||||| ||||||||||||||||| |||||||||||| ||||| | || || ||||||
Sbjct: 2047 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 2106
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
|||||||||||||| |||||||||||||||||
Sbjct: 2107 atccagaaagagtccaccctgcacctggtcct 2138
Score = 214 bits (108), Expect = 5e-53
Identities = 169/188 (89%), Gaps = 1/188 (0%)
Strand = Plus / Plus
Query: 88 actggcaagaccatcaccctagagatggagcccagtgaaaccatcgagaatgtgaaggcc 147
||||| |||||||||||||| ||| | ||||||||||| ||||| |||||||| |||||
Sbjct: 1495 actggtaagaccatcaccctggaggtcgagcccagtgacaccattgagaatgtcaaggca 1554
Query: 148 aagatccaggataaagagggcatcccccc-gaccagcagaggctcatctttgcaggcaag 206
||||||||||| || |||||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 1555 aagatccaggacaaggagggcatcccccctgaccagcagaggctgatctttgcaggcaag 1614
Query: 207 caactggaagatggctgcaccttctctgattacaacatccagaaagagtcgaccctgcac 266
|| |||||||||||| ||||| | || || |||||||||||||||||||| |||||||||
Sbjct: 1615 cagctggaagatggccgcaccctgtcagactacaacatccagaaagagtccaccctgcac 1674
Query: 267 ctggtcct 274
||||||||
Sbjct: 1675 ctggtcct 1682
Score = 52.0 bits (26), Expect = 4e-04
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcacc 105
||||| ||||| | |||||||||||| |||||||||||||||
Sbjct: 3523 atgcagatctttgtgaagaccctgacaggcaagaccatcacc 3564
>ref|NG_002285.1| Homo sapiens ubiquitin B pseudogene 4 (UBBP4) on chromosome 17
Length = 1335
Score = 242 bits (122), Expect = 2e-61
Identities = 186/206 (90%), Gaps = 1/206 (0%)
Strand = Plus / Plus
Query: 70 atcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagtgaaacc 129
||||||| ||||||||||||||| |||||||||||||| ||| ||||||||||||| |||
Sbjct: 782 atcttcgtgaagaccctgactggaaagaccatcaccctggaggtggagcccagtgacacc 841
Query: 130 atcgagaatgtgaaggccaagatccaggataaagagggcat-ccccccgaccagcagagg 188
||||| |||||||| ||||||||||||||| |||| ||||| |||||||| |||||||||
Sbjct: 842 atcgaaaatgtgaaagccaagatccaggatgaagaaggcatcccccccgatcagcagagg 901
Query: 189 ctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaacatccag 248
|||||||||||||||||| | ||||||||||| |||| | ||||| |||| |||||||
Sbjct: 902 ctcatctttgcaggcaagaagttggaagatggccgcactctttctgactacagcatccag 961
Query: 249 aaagagtcgaccctgcacctggtcct 274
||||||||||||||||||||||||||
Sbjct: 962 aaagagtcgaccctgcacctggtcct 987
Score = 240 bits (121), Expect = 8e-61
Identities = 188/209 (89%), Gaps = 1/209 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||| ||||||||||||||||| || |||||||||||
Sbjct: 548 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagt 607
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggca-tccccccgaccag 182
|| |||||||| |||||||||||||||||||| |||||||| |||| ||||||||| |||
Sbjct: 608 gacaccatcgaaaatgtgaaggccaagatccaagataaagaaggcantccccccgatcag 667
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
|||||||||||||||||||||||||| |||||||||||| | || | ||||| ||||||
Sbjct: 668 cagaggctcatctttgcaggcaagcagctggaagatggccgtactctttctgactacaac 727
Query: 243 atccagaaagagtcgaccctgcacctggt 271
|| ||||| ||||||||||||||||||||
Sbjct: 728 attcagaaggagtcgaccctgcacctggt 756
Score = 238 bits (120), Expect = 3e-60
Identities = 190/212 (89%), Gaps = 1/212 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||| ||||||||||||||||| || |||||||||||
Sbjct: 320 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagt 379
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcat-ccccccgaccag 182
|| |||||||| |||||||||||||||||||| |||||||| ||||| ||||||| || |
Sbjct: 380 gacaccatcgaaaatgtgaaggccaagatccaagataaagaaggcatcccccccggccgg 439
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
||||||||||||| |||||||||||| |||||||||||| ||| | ||||| ||||||
Sbjct: 440 cagaggctcatctctgcaggcaagcagctggaagatggccgcagtctttctgactacaac 499
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
||||||||||||||||||||||| ||||||||
Sbjct: 500 atccagaaagagtcgaccctgcatctggtcct 531
Score = 167 bits (84), Expect = 1e-38
Identities = 184/216 (85%), Gaps = 1/216 (0%)
Strand = Plus / Plus
Query: 57 ggtcaaaatgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatgga 116
||||||||||| |||||||| ||| ||||| || ||||||| ||||||||| || ||||
Sbjct: 85 ggtcaaaatgcgaatcttcgtgaaaacccttaccggcaagatcatcacccttgaagtgga 144
Query: 117 gcccagtgaaaccatcgagaatgtgaaggccaagatccaggataaagagggca-tccccc 175
|||||||| || ||||| ||||| || ||||| ||||| |||||||| |||| ||||
Sbjct: 145 gcccagtgccactatcgaaaatgtcaaagccaaaatccaagataaagaaggcaatccctg 204
Query: 176 cgaccagcagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctga 235
|||||||||||||||||||||||||||||||| | |||||||||| ||| | |||||
Sbjct: 205 tgaccagcagaggctcatctttgcaggcaagcagcgggaagatggccgcagtctttctga 264
Query: 236 ttacaacatccagaaagagtcgaccctgcacctggt 271
|| |||||||||||||||||||||||||| |||||
Sbjct: 265 ctagaacatccagaaagagtcgaccctgcatctggt 300
>emb|X07499.1|HSUBBP Homo sapiens UBBP4 pseudogene for ubiquitin UBB
Length = 1335
Score = 242 bits (122), Expect = 2e-61
Identities = 186/206 (90%), Gaps = 1/206 (0%)
Strand = Plus / Plus
Query: 70 atcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagtgaaacc 129
||||||| ||||||||||||||| |||||||||||||| ||| ||||||||||||| |||
Sbjct: 782 atcttcgtgaagaccctgactggaaagaccatcaccctggaggtggagcccagtgacacc 841
Query: 130 atcgagaatgtgaaggccaagatccaggataaagagggcat-ccccccgaccagcagagg 188
||||| |||||||| ||||||||||||||| |||| ||||| |||||||| |||||||||
Sbjct: 842 atcgaaaatgtgaaagccaagatccaggatgaagaaggcatcccccccgatcagcagagg 901
Query: 189 ctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaacatccag 248
|||||||||||||||||| | ||||||||||| |||| | ||||| |||| |||||||
Sbjct: 902 ctcatctttgcaggcaagaagttggaagatggccgcactctttctgactacagcatccag 961
Query: 249 aaagagtcgaccctgcacctggtcct 274
||||||||||||||||||||||||||
Sbjct: 962 aaagagtcgaccctgcacctggtcct 987
Score = 240 bits (121), Expect = 8e-61
Identities = 188/209 (89%), Gaps = 1/209 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||| ||||||||||||||||| || |||||||||||
Sbjct: 548 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagt 607
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggca-tccccccgaccag 182
|| |||||||| |||||||||||||||||||| |||||||| |||| ||||||||| |||
Sbjct: 608 gacaccatcgaaaatgtgaaggccaagatccaagataaagaaggcantccccccgatcag 667
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
|||||||||||||||||||||||||| |||||||||||| | || | ||||| ||||||
Sbjct: 668 cagaggctcatctttgcaggcaagcagctggaagatggccgtactctttctgactacaac 727
Query: 243 atccagaaagagtcgaccctgcacctggt 271
|| ||||| ||||||||||||||||||||
Sbjct: 728 attcagaaggagtcgaccctgcacctggt 756
Score = 238 bits (120), Expect = 3e-60
Identities = 190/212 (89%), Gaps = 1/212 (0%)
Strand = Plus / Plus
Query: 64 atgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatggagcccagt 123
||||| ||||||| |||||||||||| ||||||||||||||||| || |||||||||||
Sbjct: 320 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagt 379
Query: 124 gaaaccatcgagaatgtgaaggccaagatccaggataaagagggcat-ccccccgaccag 182
|| |||||||| |||||||||||||||||||| |||||||| ||||| ||||||| || |
Sbjct: 380 gacaccatcgaaaatgtgaaggccaagatccaagataaagaaggcatcccccccggccgg 439
Query: 183 cagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctgattacaac 242
||||||||||||| |||||||||||| |||||||||||| ||| | ||||| ||||||
Sbjct: 440 cagaggctcatctctgcaggcaagcagctggaagatggccgcagtctttctgactacaac 499
Query: 243 atccagaaagagtcgaccctgcacctggtcct 274
||||||||||||||||||||||| ||||||||
Sbjct: 500 atccagaaagagtcgaccctgcatctggtcct 531
Score = 167 bits (84), Expect = 1e-38
Identities = 184/216 (85%), Gaps = 1/216 (0%)
Strand = Plus / Plus
Query: 57 ggtcaaaatgcaaatcttcgagaagaccctgactggcaagaccatcaccctagagatgga 116
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Sbjct: 85 ggtcaaaatgcgaatcttcgtgaaaacccttaccggcaagatcatcacccttgaagtgga 144
Query: 117 gcccagtgaaaccatcgagaatgtgaaggccaagatccaggataaagagggca-tccccc 175
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Sbjct: 145 gcccagtgccactatcgaaaatgtcaaagccaaaatccaagataaagaaggcaatccctg 204
Query: 176 cgaccagcagaggctcatctttgcaggcaagcaactggaagatggctgcaccttctctga 235
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Sbjct: 205 tgaccagcagaggctcatctttgcaggcaagcagcgggaagatggccgcagtctttctga 264
Query: 236 ttacaacatccagaaagagtcgaccctgcacctggt 271
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Sbjct: 265 ctagaacatccagaaagagtcgaccctgcatctggt 300