########################################
# Program: matcher
# Rundate: Tue  8 Dec 2009 11:48:35
# Commandline: matcher
#    [-asequence] rose.pro
#    [-bsequence] rosemary.pro
#    [-outfile] matcher_simple.txt
#    -auto
#    -sprotein
#    -aformat simple
# Align_format: simple
# Report_file: matcher_simple.txt
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: AF069992_1
# 2: CAA85685.1
# Matrix: EBLOSUM62
# Gap_penalty: 14
# Extend_penalty: 4
#
# Length: 16
# Identity:       7/16 (43.8%)
# Similarity:     8/16 (50.0%)
# Gaps:           0/16 ( 0.0%)
# Score: 29
# 
#
#=======================================

AF069992_1        73 GPPPQSPDENRAGESS     88
                     |.||:......|.|||
CAA85685.1        47 GVPPEEAGAAVAAESS     62


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