//Parameters for the coalescence simulation program : simcoal.exe 1 samples //Population effective sizes (number of genes 2*diploids) 100 //Samples sizes (number of genes 2*diploids) 30 //Growth rates : negative growth implies population expansion 0 //Number of migration matrices : 0 implies no migration between demes 0 //historical event: time, source, sink, migrants, new deme size, new growth rate, migration matrix index 0 historical events //Number of independent (unlinked) chromosomes, and "chromosome structure" flag: 0 for identical structure across chromosomes, and 1 for different structures on different chromosomes. 1 1 //Number of contiguous linkage blocks in chromosome 1 //Per Block: Data type, No. of loci, Recombination rate to the right-side locus, plus optional parameters SNP 24 0.0005 0.0