#!/usr/bin/env python # Copyright 2004 by Michael Hoffman. All rights reserved. This code is # part of the Biopython distribution and governed by its license. # Please see the LICENSE file that should have been included as part # of this package. from Bio import MissingExternalDependencyError import sys if sys.platform=="win32": #Someone needs to find out if dnal works nicely on windows, #and if so where it is typically installed. raise MissingExternalDependencyError(\ "Don't know how to find the Wise2 tool dnal on Windows.") import commands not_found_types = ["command not found", "dnal: not found"] dnal_output = commands.getoutput("dnal") for not_found in not_found_types: if dnal_output.find(not_found) != -1: #raise MissingExternalDependencyError(dnal_output) raise MissingExternalDependencyError(\ "Install Wise2 (dnal) if you want to use Bio.Wise.")