This is a sample data set generated by the following command:

run_TA "-s -q 201.qual -C 201.contigs" 201.seq

It represents BAC #201 of Arabidopsis thaliana.

201.pre/	directory before run
201.post/	directory after run

For a "from scratch" run, do the following:

run_TA "-s -q 201.qual" 201.seq

-s turns on singleton reporting in the .asm file
-q specifies which quality file to use; a quality file is optional