#------------------------- TESTCODE ( 2/ 8/05) --------------------------
item:Testcode - find protein coding sequences

# The directory fsapdoc must be available in the $GDE_HELP_DIR,
# containing the file testcode.asc from the FSAP package. Again, this
# directory can be implemented as a symbolic link.
itemmethod:testcode.csh in1 in1.out $START $FINISH $WHICH $FORMAT $WINDOW $SKIP;($GDE_TEXTEDIT in1.out; $RM_CMD in1*) &
itemhelp:doc/fsap/testcode.txt
itemopen:gde_help_viewer.csh

arg:START
argtype:slider
arglabel:START
argmin:1
argmax:500000
argvalue:1

arg:FINISH
argtype:slider
arglabel:FINISH
argmin:1
argmax:500000
argvalue:500000

arg:WHICH
arglabel:Which strand?
argtype:chooser
argchoice:original:i
argchoice:opposite:o
argvalue:0

arg:FORMAT
arglabel:Output format
argtype:chooser
argchoice:Histogram:g
argchoice:Table:t
argvalue:0

arg:WINDOW
argtype:slider
arglabel:# codons in search window
argmin:10
argmax:200
argvalue:67

arg:SKIP
argtype:slider
arglabel:# to skip for each window
argmin:1
argmax:200
argvalue:10

in:in1
informat:genbank
insave: