#------------------- SeqLength ( 1/23/05) --------------------------

item:gi to Sequence Length
# Problem with Linux-Intel version of GDE (doesn't affect Solaris):
# If we declare an 'out' file, then it must always exist,
# even if we don't use it. Otherwise, gde will look for the file
# after it is done, and crash.
itemmethod:echo '' > out1; (python $BIRCH/script/gi2size.py in1 in1.flat; $WHERE)&
itemhelp:$doc/dGDE/README.Leash

in:in1
informat:flat
insave:

arg:WHERE
arglabel:Send output to
argtype:chooser
argchoice:New GDE window:(dgde in1.flat; $RM_CMD -f in1*)&
argchoice:Current GDE window:mv in1.flat out1; rm in1*
argchoice:Output file:mv in1.flat $OUTFILE; rm in1*; echo ' Get gi to Sequence Length completed'
argvalue:0

arg:OUTFILE
arglabel:Output file name
argtype:text

out:out1
outformat:flat