Mase(Defaults) UNIX Programmer's Manual Mase(Defaults) NAME _M_A_S_E default environment settings SYNOPSIS _M_A_S_E provides the user with an easily modified environ- ment. This environment consists of a set of variable values, key mappings, and key bindings. The defaults listed here may be easily overridden by the functions _S_E_T-_V_A_R_I_A_B_L_E, _B_I_N_D, and _M_A_P. They (the defaults) should be viewed as a starting point - some place to be as you start to use _M_A_S_E. If you routinely find yourself making the same modifi- cations to the _M_A_S_E environment, you should consider putting those commands into a batch file for _T_A_K_E, or even putting them into your start up file (see the manual section about _S_T_A_R_T_U_P _F_I_L_E_S for more informa- tion). Additionally, there are several _M_O_D_E functions in _M_A_S_E that will shift your environment to simplify your task. These functions are: _M_O_D_E-_D_N_A, _M_O_D_E-_P_R_O_T_E_I_N, and _M_O_D_E- _A_L_I_G_N_M_E_N_T. DESCRIPTION Default Variable Values Default Variable Value Name -1.0 Column-Correlation-Fixed-P -1 Column-Correlation-Model-Seq 2.0 Column-Correlation-Threshold 0 Column-Highlight 0.0 Consensus-Threshold On Consensus-Use-Gaps On Display-Position 0 Highlight-Differences On Ignore-Case-For-Searches Off Ignore-Selves-In-Similarity On IncrementaL-Complete Off Lock-Windows 15 Output-Characters-Between-Vertical-Breaks 90 Output-Characters-Per-Line On Output-Label-Each-Page 5 Output-Lines-Between-Horizontal-Breaks 55 Output-Lines-Per-Page On Output-Position On Output-Use-Formfeed On Pattern-Ask-Clear Off Pattern-Default-Clear Off Pattern-Ignore-Gaps Printed 11/1/88 DFCI 1 Mase(Defaults) UNIX Programmer's Manual Mase(Defaults) On Protect On Search-Ignore-Case 70 Sequence-Line-Length On Silent Off Similarity-Ignore-Selves Off Stop-At-Borders On Use-Gap-For-Consensus Key Default Binding ^B HIGHLIGHT-POSITION ^D DEL-GAP ^E JUMP-TO-END-OF-SEQUENCE ^H MV-LEFT ^J MV-DOWN ^L REFRESH ^T CURSOR-OTHER-WINDOWS ^X MOUSE-FUNCTIONS ^[ META-NEXT ^_ HELP (Use Control-? for help - see mapping below) \040 MV-RIGHT (space to move right) / SEARCH : COMMAND-MODE < SHIFT-LEFT > SHIFT-RIGHT [ SHIFT-LEFT-BOTH \ LITERAL-NEXT (don't map the next key stroke) ] SHIFT-RIGHT-BOTH { SHIFT-LEFT-BOTH-WIDE } SHIFT-RIGHT-BOTH-WIDE \177 DEL-BACK (delete key to delete backwards) \Z@ MV-UP (up cursor key is bound to this sequence) \ZA MV-DOWN (down cursor key) \ZB MV-RIGHT (right cursor key) \ZC MV-LEFT (left cursor key) \ZF CURSOR-OTHER-WINDOWS \Z[ META-NEXT (esc-esc) \M/ SEARCH-AGAIN \M< SHIFT-LEFT-WIDE \M> SHIFT-RIGHT-WIDE \M? APROPOS \MJ MARK-JUMP \MO META-NEXT (esc-O is alternate cursor prefix) \MS MARK-SET \M[ META-NEXT (esc-[ is cursor prefix) \Mj MARK-JUMP \Ml MOVE-TO-INSIDE-LEFT \Mq QUIT \Mr MOVE-TO-INSIDE-RIGHT \Ms SAVE Default Mappings Printed 11/1/88 DFCI 2 Mase(Defaults) UNIX Programmer's Manual Mase(Defaults) Key Mapping ? ^_ Map question mark into control-question mark. Use ``\?'' to get a question mark into a string \MA \Z@ For cursors \MB \ZA For cursors \MC \ZB For cursors \MD \ZC For cursors SEE ALSO _I_N_T_R_I_N_S_I_C _F_U_N_C_T_I_O_N_S, especially _S_E_T-_V_A_R_I_A_B_L_E, _B_I_N_D, _M_A_P and _T_A_K_E. _I_N_T_E_R_N_A_L-_V_A_R_I_A_B_L_E_S _S_T_A_R_T_U_P _F_I_L_E_S Printed 11/1/88 DFCI 3