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Screen Dumps

Gap4

[gap4 picture]
[Click for full size image]

In clockwise order from the top left, the screendump contains the Contig Comparator containing a variety of search results, the Template Plot and Quality Plot, the Contig Editor, and the Traces windows.


Spin

[spin picture]
[Click for full size image]
Spin is a new combination of the older nip4 and sip4 programs. In the above screendump we see some of spin's nucleotide analysis features. In clockwise order from the top left it contains the main output window (showing the results of a string search), the string search dialogue, a graphical plot of coding likelihood and stop codons, and the scrolling sequence display showing a three phase translation and restriction enzymes.

[spin_sip picture]
[Click for full size image]
This next screendump shows some sequence comparison plots, in this case with proteins (although spin can also compare dna against dna and dna against protein). In clockwise order from the top left, the screendump contains the dotplot containing similarity between two sequences and an alignment, the main menus and output window, and the scrolled sequence comparator.


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This page is maintained by staden-package.
URL: http://www.mrc-lmb.cam.ac.uk/pubseq/screendumps.html