--MAE error log [Thu May 11 15:25:11 CDT 2006]-- ==== T-getData: Startup DB, file=/home/psgendb/local/java/MAExplorer/MAE/Lact1-C57vsStat5a-38probes.mae ==== T-getData: Configuration Parameters, file=/home/psgendb/local/java/MAExplorer/Config/MaExplorerConfig.txt MP-AMA maxSpots=3456 maxGenes=1728 maxFGRC=6750 --------------------------- *** STARTING MAExplorer *** --------------------------- browserTitle=MicroArray Explorer - V.0.96.34.01-Beta - Lactation day 1: C57B6 vs Stat5a (-,-), all 38 public probes verStr=Nov 24, 2003 date=Thu May 11 15:25:11 CDT 2006 Screen (widthXheight)=(1280 X 1024) osName=SunOS codeBase=/home/psgendb/local/java/MAExplorer/ prjListFile=/home/psgendb/local/java/MAExplorer/MAEprojects.txt defSAprjName=Empty database defDir=/home/psgendb/local/java/MAExplorer/MAE/ defStartupFile=Lact1-C57vsStat5a-38probes.mae defSAwebAddr= startupDir=/home/psgendb/local/java/MAExplorer/ fileBasePath=/home/psgendb/local/java/MAExplorer/ maeServerBase=null isWorkingMAE=false fileBasePath=/home/psgendb/local/java/MAExplorer/ sampDBfile=/home/psgendb/local/java/MAExplorer/Config/public-SamplesDB-MGAP.txt gipoFile=/home/psgendb/local/java/MAExplorer/Config/GIPO-MGAP.txt maxPreloadImgs=38 ==== T-getData: Samples Info, file=/home/psgendb/local/java/MAExplorer/Config/public-SamplesDB-MGAP.txt MT-RLSN maName='image1' databaseFile=C57B6-virgin-3hrs-1 MT-RLSN maName='image2' databaseFile=C57B6-virgin-3hrs-2 MT-RLSN maName='image3' databaseFile=C57B6-p13-totalRNA5ug MT-RLSN maName='image4' databaseFile=C57B6-p13.1 MT-RLSN maName='image5' databaseFile=C57B6-p13.2poly-A MT-RLSN maName='image6' databaseFile=C57-p16-2hrs-50 MT-RLSN maName='image7' databaseFile=C57B6-L1-30min MT-RLSN maName='image8' databaseFile=C57B6-L1-3hrs MT-RLSN maName='image9' databaseFile=C57B6-L1-4hrs MT-RLSN maName='image10' databaseFile=C57B6-L1-total MT-RLSN maName='image11' databaseFile=C57B6-L3-1hr MT-RLSN maName='image12' databaseFile=C57B6-L10-29hrs-1 MT-RLSN maName='image13' databaseFile=C57B6-L10-29hrs-2 MT-RLSN maName='image14' databaseFile=C57B6-L10-29hrs-2nd-1 MT-RLSN maName='image15' databaseFile=C57B6-L10-29hrs-2nd-2 MT-RLSN maName='image16' databaseFile=C57B6-L10-6hrs-1 MT-RLSN maName='image17' databaseFile=C57B6-L10-6hrs-2 MT-RLSN maName='image18' databaseFile=C57B6-I4-25hrs MT-RLSN maName='image19' databaseFile=Stat5a.--.p13-15min MT-RLSN maName='image20' databaseFile=Stat5a.--.p13-15min2 MT-RLSN maName='image21' databaseFile=Stat5a.--.p13-1hr2 MT-RLSN maName='image22' databaseFile=Stat5a.--.p13-30min MT-RLSN maName='image23' databaseFile=Stat5a.--.p13-30min2 MT-RLSN maName='image24' databaseFile=Stat5a.--.L1-30min MT-RLSN maName='image25' databaseFile=CEBP-null-virgin-18hrs MT-RLSN maName='image26' databaseFile=CEBP-null-p13-18hrs MT-RLSN maName='image27' databaseFile=CEBP-null-p16-18hrs MT-RLSN maName='image28' databaseFile=CEBP-null-1hr MT-RLSN maName='image29' databaseFile=4A-1hr MT-RLSN maName='image30' databaseFile=4B-1hr MT-RLSN maName='image31' databaseFile=4C-5hrs MT-RLSN maName='image32' databaseFile=8A-1hr MT-RLSN maName='image33' databaseFile=BetaB-Hemo MT-RLSN maName='image34' databaseFile=BetaB-null-1hr MT-RLSN maName='image35' databaseFile=HR1-1hr MT-RLSN maName='image36' databaseFile=HR2-5hrs MT-RLSN maName='image37' databaseFile=Inh-31-null-1hr MT-RLSN maName='image38' databaseFile=WAP-Tag-tumor-1h ==== T-getData: GIPO data, file=/home/psgendb/local/java/MAExplorer/Config/GIPO-MGAP.txt MHP-RHPQF: hpNbr=1 quantFile=/home/psgendb/local/java/MAExplorer/Quant/C57B6-virgin-3hrs-1.quant ==== T-getData: Array Quant Data [C57B6-virgin-3hrs-1], file=/home/psgendb/local/java/MAExplorer/Quant/C57B6-virgin-3hrs-1.quant WARNING: short maQtbl #rows=3264 #spots=3456 MHP-RHPQF: hpNbr=2 quantFile=/home/psgendb/local/java/MAExplorer/Quant/C57B6-virgin-3hrs-2.quant ==== T-getData: Array Quant Data [C57B6-virgin-3hrs-2], file=/home/psgendb/local/java/MAExplorer/Quant/C57B6-virgin-3hrs-2.quant WARNING: short maQtbl #rows=3264 #spots=3456 MHP-RHPQF: hpNbr=3 quantFile=/home/psgendb/local/java/MAExplorer/Quant/C57B6-p13-totalRNA5ug.quant ==== T-getData: Array Quant Data [C57B6-p13-totalRNA5ug], file=/home/psgendb/local/java/MAExplorer/Quant/C57B6-p13-totalRNA5ug.quant WARNING: short maQtbl #rows=3264 #spots=3456 MHP-RHPQF: hpNbr=4 quantFile=/home/psgendb/local/java/MAExplorer/Quant/C57B6-p13.1.quant ==== T-getData: Array Quant Data [C57B6-p13.1], file=/home/psgendb/local/java/MAExplorer/Quant/C57B6-p13.1.quant WARNING: short maQtbl #rows=3264 #spots=3456 MHP-RHPQF: hpNbr=5 quantFile=/home/psgendb/local/java/MAExplorer/Quant/C57B6-p13.2poly-A.quant ==== T-getData: Array Quant Data [C57B6-p13.2poly-A], file=/home/psgendb/local/java/MAExplorer/Quant/C57B6-p13.2poly-A.quant WARNING: short maQtbl #rows=3264 #spots=3456 MHP-RHPQF: hpNbr=6 quantFile=/home/psgendb/local/java/MAExplorer/Quant/C57-p16-2hrs-50.quant ==== T-getData: Array Quant Data [C57-p16-2hrs-50], file=/home/psgendb/local/java/MAExplorer/Quant/C57-p16-2hrs-50.quant WARNING: short maQtbl #rows=3264 #spots=3456 MHP-RHPQF: hpNbr=7 quantFile=/home/psgendb/local/java/MAExplorer/Quant/C57B6-L1-30min.quant ==== T-getData: Array Quant Data [C57B6-L1-30min], file=/home/psgendb/local/java/MAExplorer/Quant/C57B6-L1-30min.quant WARNING: short maQtbl #rows=3264 #spots=3456 MHP-RHPQF: hpNbr=8 quantFile=/home/psgendb/local/java/MAExplorer/Quant/C57B6-L1-3hrs.quant ==== T-getData: Array Quant Data [C57B6-L1-3hrs], file=/home/psgendb/local/java/MAExplorer/Quant/C57B6-L1-3hrs.quant WARNING: short maQtbl #rows=3264 #spots=3456 MHP-RHPQF: hpNbr=9 quantFile=/home/psgendb/local/java/MAExplorer/Quant/C57B6-L1-4hrs.quant ==== T-getData: Array Quant Data [C57B6-L1-4hrs], file=/home/psgendb/local/java/MAExplorer/Quant/C57B6-L1-4hrs.quant WARNING: short maQtbl #rows=3264 #spots=3456 MHP-RHPQF: hpNbr=10 quantFile=/home/psgendb/local/java/MAExplorer/Quant/C57B6-L1-total.quant ==== T-getData: Array Quant Data [C57B6-L1-total], file=/home/psgendb/local/java/MAExplorer/Quant/C57B6-L1-total.quant WARNING: short maQtbl #rows=3264 #spots=3456 MHP-RHPQF: hpNbr=11 quantFile=/home/psgendb/local/java/MAExplorer/Quant/C57B6-L3-1hr.quant ==== T-getData: Array Quant Data [C57B6-L3-1hr], file=/home/psgendb/local/java/MAExplorer/Quant/C57B6-L3-1hr.quant WARNING: short maQtbl #rows=3264 #spots=3456 MHP-RHPQF: hpNbr=12 quantFile=/home/psgendb/local/java/MAExplorer/Quant/C57B6-L10-29hrs-1.quant ==== T-getData: Array Quant Data [C57B6-L10-29hrs-1], file=/home/psgendb/local/java/MAExplorer/Quant/C57B6-L10-29hrs-1.quant WARNING: short maQtbl #rows=3264 #spots=3456 MHP-RHPQF: hpNbr=13 quantFile=/home/psgendb/local/java/MAExplorer/Quant/C57B6-L10-29hrs-2.quant ==== T-getData: Array Quant Data [C57B6-L10-29hrs-2], file=/home/psgendb/local/java/MAExplorer/Quant/C57B6-L10-29hrs-2.quant WARNING: short maQtbl #rows=3264 #spots=3456 MHP-RHPQF: hpNbr=14 quantFile=/home/psgendb/local/java/MAExplorer/Quant/C57B6-L10-29hrs-2nd-1.quant ==== T-getData: Array Quant Data [C57B6-L10-29hrs-2nd-1], file=/home/psgendb/local/java/MAExplorer/Quant/C57B6-L10-29hrs-2nd-1.quant WARNING: short maQtbl #rows=3264 #spots=3456 MHP-RHPQF: hpNbr=15 quantFile=/home/psgendb/local/java/MAExplorer/Quant/C57B6-L10-29hrs-2nd-2.quant ==== T-getData: Array Quant Data [C57B6-L10-29hrs-2nd-2], file=/home/psgendb/local/java/MAExplorer/Quant/C57B6-L10-29hrs-2nd-2.quant WARNING: short maQtbl #rows=3264 #spots=3456 MHP-RHPQF: hpNbr=16 quantFile=/home/psgendb/local/java/MAExplorer/Quant/C57B6-L10-6hrs-1.quant ==== T-getData: Array Quant Data [C57B6-L10-6hrs-1], file=/home/psgendb/local/java/MAExplorer/Quant/C57B6-L10-6hrs-1.quant WARNING: short maQtbl #rows=3264 #spots=3456 MHP-RHPQF: hpNbr=17 quantFile=/home/psgendb/local/java/MAExplorer/Quant/C57B6-L10-6hrs-2.quant ==== T-getData: Array Quant Data [C57B6-L10-6hrs-2], file=/home/psgendb/local/java/MAExplorer/Quant/C57B6-L10-6hrs-2.quant WARNING: short maQtbl #rows=3264 #spots=3456 MHP-RHPQF: hpNbr=18 quantFile=/home/psgendb/local/java/MAExplorer/Quant/C57B6-I4-25hrs.quant ==== T-getData: Array Quant Data [C57B6-I4-25hrs], file=/home/psgendb/local/java/MAExplorer/Quant/C57B6-I4-25hrs.quant WARNING: short maQtbl #rows=3264 #spots=3456 MHP-RHPQF: hpNbr=19 quantFile=/home/psgendb/local/java/MAExplorer/Quant/Stat5a.--.p13-15min.quant ==== T-getData: Array Quant Data [Stat5a.--.p13-15min], file=/home/psgendb/local/java/MAExplorer/Quant/Stat5a.--.p13-15min.quant WARNING: short maQtbl #rows=3264 #spots=3456 MHP-RHPQF: hpNbr=20 quantFile=/home/psgendb/local/java/MAExplorer/Quant/Stat5a.--.p13-15min2.quant ==== T-getData: Array Quant Data [Stat5a.--.p13-15min2], file=/home/psgendb/local/java/MAExplorer/Quant/Stat5a.--.p13-15min2.quant WARNING: short maQtbl #rows=3264 #spots=3456 MHP-RHPQF: hpNbr=21 quantFile=/home/psgendb/local/java/MAExplorer/Quant/Stat5a.--.p13-1hr2.quant ==== T-getData: Array Quant Data [Stat5a.--.p13-1hr2], file=/home/psgendb/local/java/MAExplorer/Quant/Stat5a.--.p13-1hr2.quant WARNING: short maQtbl #rows=3264 #spots=3456 MHP-RHPQF: hpNbr=22 quantFile=/home/psgendb/local/java/MAExplorer/Quant/Stat5a.--.p13-30min.quant ==== T-getData: Array Quant Data [Stat5a.--.p13-30min], file=/home/psgendb/local/java/MAExplorer/Quant/Stat5a.--.p13-30min.quant WARNING: short maQtbl #rows=3264 #spots=3456 MHP-RHPQF: hpNbr=23 quantFile=/home/psgendb/local/java/MAExplorer/Quant/Stat5a.--.p13-30min2.quant ==== T-getData: Array Quant Data [Stat5a.--.p13-30min2], file=/home/psgendb/local/java/MAExplorer/Quant/Stat5a.--.p13-30min2.quant WARNING: short maQtbl #rows=3264 #spots=3456 MHP-RHPQF: hpNbr=24 quantFile=/home/psgendb/local/java/MAExplorer/Quant/Stat5a.--.L1-30min.quant ==== T-getData: Array Quant Data [Stat5a.--.L1-30min], file=/home/psgendb/local/java/MAExplorer/Quant/Stat5a.--.L1-30min.quant WARNING: short maQtbl #rows=3264 #spots=3456 MHP-RHPQF: hpNbr=25 quantFile=/home/psgendb/local/java/MAExplorer/Quant/CEBP-null-virgin-18hrs.quant ==== T-getData: Array Quant Data [CEBP-null-virgin-18hrs], file=/home/psgendb/local/java/MAExplorer/Quant/CEBP-null-virgin-18hrs.quant WARNING: short maQtbl #rows=3264 #spots=3456 MHP-RHPQF: hpNbr=26 quantFile=/home/psgendb/local/java/MAExplorer/Quant/CEBP-null-p13-18hrs.quant ==== T-getData: Array Quant Data [CEBP-null-p13-18hrs], file=/home/psgendb/local/java/MAExplorer/Quant/CEBP-null-p13-18hrs.quant WARNING: short maQtbl #rows=3264 #spots=3456 MHP-RHPQF: hpNbr=27 quantFile=/home/psgendb/local/java/MAExplorer/Quant/CEBP-null-p16-18hrs.quant ==== T-getData: Array Quant Data [CEBP-null-p16-18hrs], file=/home/psgendb/local/java/MAExplorer/Quant/CEBP-null-p16-18hrs.quant WARNING: short maQtbl #rows=3264 #spots=3456 MHP-RHPQF: hpNbr=28 quantFile=/home/psgendb/local/java/MAExplorer/Quant/CEBP-null-1hr.quant ==== T-getData: Array Quant Data [CEBP-null-1hr], file=/home/psgendb/local/java/MAExplorer/Quant/CEBP-null-1hr.quant WARNING: short maQtbl #rows=3264 #spots=3456 MHP-RHPQF: hpNbr=29 quantFile=/home/psgendb/local/java/MAExplorer/Quant/4A-1hr.quant ==== T-getData: Array Quant Data [4A-1hr], file=/home/psgendb/local/java/MAExplorer/Quant/4A-1hr.quant WARNING: short maQtbl #rows=3264 #spots=3456 MHP-RHPQF: hpNbr=30 quantFile=/home/psgendb/local/java/MAExplorer/Quant/4B-1hr.quant ==== T-getData: Array Quant Data [4B-1hr], file=/home/psgendb/local/java/MAExplorer/Quant/4B-1hr.quant WARNING: short maQtbl #rows=3264 #spots=3456 MHP-RHPQF: hpNbr=31 quantFile=/home/psgendb/local/java/MAExplorer/Quant/4C-5hrs.quant ==== T-getData: Array Quant Data [4C-5hrs], file=/home/psgendb/local/java/MAExplorer/Quant/4C-5hrs.quant WARNING: short maQtbl #rows=3264 #spots=3456 MHP-RHPQF: hpNbr=32 quantFile=/home/psgendb/local/java/MAExplorer/Quant/8A-1hr.quant ==== T-getData: Array Quant Data [8A-1hr], file=/home/psgendb/local/java/MAExplorer/Quant/8A-1hr.quant WARNING: short maQtbl #rows=3264 #spots=3456 MHP-RHPQF: hpNbr=33 quantFile=/home/psgendb/local/java/MAExplorer/Quant/BetaB-Hemo.quant ==== T-getData: Array Quant Data [BetaB-Hemo], file=/home/psgendb/local/java/MAExplorer/Quant/BetaB-Hemo.quant WARNING: short maQtbl #rows=3264 #spots=3456 MHP-RHPQF: hpNbr=34 quantFile=/home/psgendb/local/java/MAExplorer/Quant/BetaB-null-1hr.quant ==== T-getData: Array Quant Data [BetaB-null-1hr], file=/home/psgendb/local/java/MAExplorer/Quant/BetaB-null-1hr.quant WARNING: short maQtbl #rows=3264 #spots=3456 MHP-RHPQF: hpNbr=35 quantFile=/home/psgendb/local/java/MAExplorer/Quant/HR1-1hr.quant ==== T-getData: Array Quant Data [HR1-1hr], file=/home/psgendb/local/java/MAExplorer/Quant/HR1-1hr.quant WARNING: short maQtbl #rows=3264 #spots=3456 MHP-RHPQF: hpNbr=36 quantFile=/home/psgendb/local/java/MAExplorer/Quant/HR2-5hrs.quant ==== T-getData: Array Quant Data [HR2-5hrs], file=/home/psgendb/local/java/MAExplorer/Quant/HR2-5hrs.quant WARNING: short maQtbl #rows=3264 #spots=3456 MHP-RHPQF: hpNbr=37 quantFile=/home/psgendb/local/java/MAExplorer/Quant/Inh-31-null-1hr.quant ==== T-getData: Array Quant Data [Inh-31-null-1hr], file=/home/psgendb/local/java/MAExplorer/Quant/Inh-31-null-1hr.quant WARNING: short maQtbl #rows=3264 #spots=3456 MHP-RHPQF: hpNbr=38 quantFile=/home/psgendb/local/java/MAExplorer/Quant/WAP-Tag-tumor-1h.quant ==== T-getData: Array Quant Data [WAP-Tag-tumor-1h], file=/home/psgendb/local/java/MAExplorer/Quant/WAP-Tag-tumor-1h.quant WARNING: short maQtbl #rows=3264 #spots=3456 FIO-WFTD fileNotFound[/home/psgendb/local/java/MAExplorer/Temp/tmp-OCL-PCA-3Dplot-Samples-RLO.R] java.io.FileNotFoundException: /home/psgendb/local/java/MAExplorer/Temp/tmp-OCL-PCA-3Dplot-Samples-RLO.R (Permission denied) FIO-WFTD fileNotFound[/home/psgendb/local/java/MAExplorer/Temp/tmp-OCL-PCA-3Dplot-Samples-RLO.R] java.io.FileNotFoundException: /home/psgendb/local/java/MAExplorer/Temp/tmp-OCL-PCA-3Dplot-Samples-RLO.R (Permission denied)