/*
Copyright @ 2003, The Institute for Genomic Research (TIGR).
All rights reserved.
*/
/*
 * $RCSfile: MevAttributes.java,v $
 * $Revision: 1.7 $
 * $Date: 2005/01/12 20:19:41 $
 * $Author: jli $
 * $State: Exp $
 */

/***************************************************************************
 * Author:  Jianwei(Jerry) Li
 * Name:  MevAttributes (Version 1.4)
 * Date:  Created: 05/06/2003 and modified:  06/28/2004
 * Descp: constant defination for TIGR Mev file.
 ***************************************************************************/

package org.tigr.microarray;

public interface MevAttributes {

  public static final String AMP = "AMP";  // amplified value
  public static final String ANALYSIS_ID = "analysis_id";
  public static final String BKG = "Bkg";
  public static final String BKG_CORRECT = "background_correction";
  public static final String BKG_OLD = "BG";
  public static final String BKGA = "BkgA";
  public static final String BKGA_OLD = "BGA";
  public static final String BKGB = "BkgB";
  public static final String BKGB_OLD = "BGB";
  public static final String C = "C";             // slide column
  public static final String CLONE_NAME = "CloneN";
  public static final String CLUSTER = "Cluster";
  public static final String COLON = ":";
  public static final String COM_NAME = "ComN";
  public static final String CREATED_BY = "created by";
  public static final String CREATOR = "analyst";
  public static final String DATE = "date";
  public static final String DBID = "DBID";
  public static final String FEAT_NAME = "FeatN";
  public static final String FLAG = "Flag";
  public static final String FLAGA = "FlagA";
  public static final String FLAGB = "FlagB";
  public static final String FORMAT_VERSION = "format_version";
  public static final String GB_NUM = "GBNum";
  public static final String GB_NUM_OLD = "GB#";
  public static final String GENE_NAME = "GeneN";
  public static final String IA = "IA";            // intensity for channel 1
  public static final String IB = "IB";            // intensity for channel 2
  public static final String LOCUS = "Locus";
  public static final String MEDA = "MedA";
  public static final String MEDB = "MedB";
  public static final String MC = "MC";            // meta-column (block colunm)
  public static final String MR = "MR";            // meta-row (block row)
  public static final String ON = "ON";
  public static final String OFF = "OFF";
  public static final String QC_SCORE = "QC";
  public static final String QCA = "QCA";
  public static final String QCB = "QCB";
  public static final String R = "R";              // slide row
  public static final String PAN = "#";
  public static final String PLATE_NUM = "PlateNum";
  public static final String PLATE_NUM_OLD = "Plate#";
  public static final String PROD_SIZE = "ProdSize";
  public static final String ROW_COUNT = "row_count";
  public static final String ROLE_GUESS = "RolGus";
  public static final String SA = "SA";            // spot area
  public static final String SAA = "SAA";
  public static final String SAB = "SAB";
  public static final String SAT_A = "SatA";
  public static final String SAT_B = "SatB";
  public static final String SFA = "SFA";         // spot saturation factor
  public static final String SFB = "SFB";
  public static final String SC = "SC";            // sub-colunm
  public static final String SDA = "SDA";
  public static final String SDB = "SDB";
  public static final String SLIDE_TYPE = "slide_type";
  public static final String SPACE = " ";
  public static final String SR = "SR";            // sub-row
  public static final String TAB = "\t";
  public static final String TC_NUM = "TCNum";
  public static final String TC_NUM_OLD = "TC#";
  public static final String UID = "UID";          // unique ID
  public static final String WELL_NUM = "WellNum";   // well number
  public static final String WELL_NUM_OLD = "Well#";   // well number
  public static final String VERSION = "version";
}