### Name: smooth.f ### Title: Smooth Distributions on Data Points ### Aliases: smooth.f ### Keywords: smooth nonparametric ### ** Examples # Example 9.8 of Davison and Hinkley (1997) requires tilting the resampling # distribution of the studentized statistic to be centred at the observed # value of the test statistic 1.84. In the book exponential tilting was used # but it is also possible to use smooth.f. grav1 <- gravity[as.numeric(gravity[,2])>=7,] grav.fun <- function(dat, w, orig) { strata <- tapply(dat[, 2], as.numeric(dat[, 2])) d <- dat[, 1] ns <- tabulate(strata) w <- w/tapply(w, strata, sum)[strata] mns <- tapply(d * w, strata, sum) mn2 <- tapply(d * d * w, strata, sum) s2hat <- sum((mn2 - mns^2)/ns) c(mns[2]-mns[1], s2hat, (mns[2]-mns[1]-orig)/sqrt(s2hat)) } grav.z0 <- grav.fun(grav1,rep(1,26),0) grav.boot <- boot(grav1, grav.fun, R=499, stype="w", strata=grav1[,2], orig=grav.z0[1]) grav.sm <- smooth.f(grav.z0[3], grav.boot, index=3) # Now we can run another bootstrap using these weights grav.boot2 <- boot(grav1, grav.fun, R=499, stype="w", strata=grav1[,2], orig=grav.z0[1], weights=grav.sm) # Estimated p-values can be found from these as follows mean(grav.boot$t[,3] >= grav.z0[3]) imp.prob(grav.boot2,t0=-grav.z0[3],t=-grav.boot2$t[,3]) # Note that for the importance sampling probability we must # multiply everything by -1 to ensure that we find the correct # probability. Raw resampling is not reliable for probabilities # greater than 0.5. Thus 1-imp.prob(grav.boot2,index=3,t0=grav.z0[3])$raw # can give very strange results (negative probabilities).