initialize-methods package:methods R Documentation _M_e_t_h_o_d_s _t_o _I_n_i_t_i_a_l_i_z_e _N_e_w _O_b_j_e_c_t_s _f_r_o_m _a _C_l_a_s_s _D_e_s_c_r_i_p_t_i_o_n: The arguments to function 'new' to create an object from a particular class can be interpreted specially for that class, by the definition of a method for function 'initialize' for the class. This documentation describes some existing methods, and also outlines how to write new ones. _M_e_t_h_o_d_s: ._O_b_j_e_c_t = "_A_N_Y" The default method for 'initialize' takes either named or unnamed arguments. Argument names must be the names of slots in this class definition, and the corresponding arguments must be valid objects for the slot (that is, have the same class as specified for the slot, or some superclass of that class). If the object comes from a superclass, it is not coerced strictly, so normally it will retain its current class (specifically, 'as(object, Class, strict = FALSE)'). Unnamed arguments must be objects of this class, of one of its superclasses, or one of its subclasses (from the class, from a class this class extends, or from a class that extends this class). If the object is from a superclass, this normally defines some of the slots in the object. If the object is from a subclass, the new object is that argument, coerced to the current class. Unnamed arguments are processed first, in the order they appear. Then named arguments are processed. Therefore, explicit values for slots always override any values inferred from superclass or subclass arguments. ._O_b_j_e_c_t = "_t_r_a_c_e_a_b_l_e" Objects of a class that extends 'traceable' are used to implement debug tracing (see class traceable and 'trace'). The 'initialize' method for these classes takes special arguments 'def, tracer, exit, at, print'. The first of these is the object to use as the original definition (e.g., a function). The others correspond to the arguments to 'trace'. ._O_b_j_e_c_t = "_e_n_v_i_r_o_n_m_e_n_t" The 'initialize' method for environments takes a named list of objects to be used to initialize the environment. ._O_b_j_e_c_t = "_s_i_g_n_a_t_u_r_e" This is a method for internal use only. It takes an optional 'functionDef' argument to provide a generic function with a 'signature' slot to define the argument names. See Methods for details. _W_r_i_t_i_n_g _I_n_i_t_i_a_l_i_z_a_t_i_o_n _M_e_t_h_o_d_s: Initialization methods provide a general mechanism corresponding to generator functions in other languages. The arguments to 'initialize' are '.Object' and .... Nearly always, 'initialize' is called from 'new', not directly. The '.Object' argument is then the prototype object from the class. Two techniques are often appropriate for 'initialize' methods: special argument names and 'callNextMethod'. You may want argument names that are more natural to your users than the (default) slot names. These will be the formal arguments to your method definition, in addition to '.Object' (always) and ... (optionally). For example, the method for class '"traceable"' documented above would be created by a call to 'setMethod' of the form: setMethod("initialize", "traceable", function(.Object, def, tracer, exit, at, print) ... ) In this example, no other arguments are meaningful, and the resulting method will throw an error if other names are supplied. When your new class extends another class, you may want to call the initialize method for this superclass (either a special method or the default). For example, suppose you want to define a method for your class, with special argument 'x', but you also want users to be able to set slots specifically. If you want 'x' to override the slot information, the beginning of your method definition might look something like this: function(.Object, x, ...) { Object <- callNextMethod(.Object, ...) if(!missing(x)) { # do something with x You could also choose to have the inherited method override, by first interpreting 'x', and then calling the next method.