[.pdMat package:nlme R Documentation _S_u_b_s_c_r_i_p_t _a _p_d_M_a_t _O_b_j_e_c_t _D_e_s_c_r_i_p_t_i_o_n: This method function extracts sub-matrices from the positive-definite matrix represented by 'x'. _U_s_a_g_e: ## S3 method for class 'pdMat': x[i, j, drop = TRUE] ## S3 replacement method for class 'pdMat': x[i, j] <- value _A_r_g_u_m_e_n_t_s: x: an object inheriting from class 'pdMat' representing a positive-definite matrix. i, j: optional subscripts applying respectively to the rows and columns of the positive-definite matrix represented by 'object'. When 'i' ('j') is omitted, all rows (columns) are extracted. drop: a logical value. If 'TRUE', single rows or columns are converted to vectors. If 'FALSE' the returned value retains its matrix representation. value: a vector, or matrix, with the replacement values for the relevant piece of the matrix represented by 'x'. _V_a_l_u_e: if 'i' and 'j' are identical, the returned value will be 'pdMat' object with the same class as 'x'. Otherwise, the returned value will be a matrix. In the case a single row (or column) is selected, the returned value may be converted to a vector, according to the rules above. _A_u_t_h_o_r(_s): Jose Pinheiro Jose.Pinheiro@pharma.novartis.com and Douglas Bates bates@stat.wisc.edu _S_e_e _A_l_s_o: '[', 'pdMat' _E_x_a_m_p_l_e_s: pd1 <- pdSymm(diag(3)) pd1[1, , drop = FALSE] pd1[1:2, 1:2] <- 3 * diag(2)