# CMAKE generated file: DO NOT EDIT! # Generated by "Unix Makefiles" Generator, CMake Version 2.8 # Default target executed when no arguments are given to make. default_target: all .PHONY : default_target #============================================================================= # Special targets provided by cmake. # Disable implicit rules so canoncical targets will work. .SUFFIXES: # Remove some rules from gmake that .SUFFIXES does not remove. SUFFIXES = .SUFFIXES: .hpux_make_needs_suffix_list # Suppress display of executed commands. $(VERBOSE).SILENT: # A target that is always out of date. cmake_force: .PHONY : cmake_force #============================================================================= # Set environment variables for the build. # The shell in which to execute make rules. SHELL = /bin/sh # The CMake executable. CMAKE_COMMAND = /home/psgendb/local/pkg/CASAVA_v1.8.2-build/bootstrap/bin/cmake # The command to remove a file. RM = /home/psgendb/local/pkg/CASAVA_v1.8.2-build/bootstrap/bin/cmake -E remove -f # The program to use to edit the cache. CMAKE_EDIT_COMMAND = /home/psgendb/local/pkg/CASAVA_v1.8.2-build/bootstrap/bin/ccmake # The top-level source directory on which CMake was run. CMAKE_SOURCE_DIR = /home/psgendb/local/pkg/CASAVA_v1.8.2/src # The top-level build directory on which CMake was run. CMAKE_BINARY_DIR = /home/psgendb/local/pkg/CASAVA_v1.8.2-build #============================================================================= # Targets provided globally by CMake. # Special rule for the target edit_cache edit_cache: @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --cyan "Running CMake cache editor..." ../../../bootstrap/bin/ccmake -H$(CMAKE_SOURCE_DIR) -B$(CMAKE_BINARY_DIR) .PHONY : edit_cache # Special rule for the target edit_cache edit_cache/fast: edit_cache .PHONY : edit_cache/fast # Special rule for the target install install: preinstall @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --cyan "Install the project..." ../../../bootstrap/bin/cmake -P cmake_install.cmake .PHONY : install # Special rule for the target install install/fast: preinstall/fast @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --cyan "Install the project..." ../../../bootstrap/bin/cmake -P cmake_install.cmake .PHONY : install/fast # Special rule for the target install/local install/local: preinstall @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --cyan "Installing only the local directory..." ../../../bootstrap/bin/cmake -DCMAKE_INSTALL_LOCAL_ONLY=1 -P cmake_install.cmake .PHONY : install/local # Special rule for the target install/local install/local/fast: install/local .PHONY : install/local/fast # Special rule for the target install/strip install/strip: preinstall @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --cyan "Installing the project stripped..." ../../../bootstrap/bin/cmake -DCMAKE_INSTALL_DO_STRIP=1 -P cmake_install.cmake .PHONY : install/strip # Special rule for the target install/strip install/strip/fast: install/strip .PHONY : install/strip/fast # Special rule for the target list_install_components list_install_components: @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --cyan "Available install components are: \"Unspecified\"" .PHONY : list_install_components # Special rule for the target list_install_components list_install_components/fast: list_install_components .PHONY : list_install_components/fast # Special rule for the target rebuild_cache rebuild_cache: @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --cyan "Running CMake to regenerate build system..." ../../../bootstrap/bin/cmake -H$(CMAKE_SOURCE_DIR) -B$(CMAKE_BINARY_DIR) .PHONY : rebuild_cache # Special rule for the target rebuild_cache rebuild_cache/fast: rebuild_cache .PHONY : rebuild_cache/fast # Special rule for the target test test: @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --cyan "Running tests..." ../../../bootstrap/bin/ctest --force-new-ctest-process $(ARGS) .PHONY : test # Special rule for the target test test/fast: test .PHONY : test/fast # The main all target all: cmake_check_build_system cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(CMAKE_COMMAND) -E cmake_progress_start /home/psgendb/local/pkg/CASAVA_v1.8.2-build/CMakeFiles /home/psgendb/local/pkg/CASAVA_v1.8.2-build/c++/lib/SamMD/CMakeFiles/progress.marks cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(MAKE) -f CMakeFiles/Makefile2 c++/lib/SamMD/all $(CMAKE_COMMAND) -E cmake_progress_start /home/psgendb/local/pkg/CASAVA_v1.8.2-build/CMakeFiles 0 .PHONY : all # The main clean target clean: cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(MAKE) -f CMakeFiles/Makefile2 c++/lib/SamMD/clean .PHONY : clean # The main clean target clean/fast: clean .PHONY : clean/fast # Prepare targets for installation. preinstall: all cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(MAKE) -f CMakeFiles/Makefile2 c++/lib/SamMD/preinstall .PHONY : preinstall # Prepare targets for installation. preinstall/fast: cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(MAKE) -f CMakeFiles/Makefile2 c++/lib/SamMD/preinstall .PHONY : preinstall/fast # clear depends depend: cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(CMAKE_COMMAND) -H$(CMAKE_SOURCE_DIR) -B$(CMAKE_BINARY_DIR) --check-build-system CMakeFiles/Makefile.cmake 1 .PHONY : depend # Convenience name for target. c++/lib/SamMD/CMakeFiles/casava_SamMD.dir/rule: cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(MAKE) -f CMakeFiles/Makefile2 c++/lib/SamMD/CMakeFiles/casava_SamMD.dir/rule .PHONY : c++/lib/SamMD/CMakeFiles/casava_SamMD.dir/rule # Convenience name for target. casava_SamMD: c++/lib/SamMD/CMakeFiles/casava_SamMD.dir/rule .PHONY : casava_SamMD # fast build rule for target. casava_SamMD/fast: cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(MAKE) -f c++/lib/SamMD/CMakeFiles/casava_SamMD.dir/build.make c++/lib/SamMD/CMakeFiles/casava_SamMD.dir/build .PHONY : casava_SamMD/fast fastaReader.o: fastaReader.cpp.o .PHONY : fastaReader.o # target to build an object file fastaReader.cpp.o: cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(MAKE) -f c++/lib/SamMD/CMakeFiles/casava_SamMD.dir/build.make c++/lib/SamMD/CMakeFiles/casava_SamMD.dir/fastaReader.cpp.o .PHONY : fastaReader.cpp.o fastaReader.i: fastaReader.cpp.i .PHONY : fastaReader.i # target to preprocess a source file fastaReader.cpp.i: cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(MAKE) -f c++/lib/SamMD/CMakeFiles/casava_SamMD.dir/build.make c++/lib/SamMD/CMakeFiles/casava_SamMD.dir/fastaReader.cpp.i .PHONY : fastaReader.cpp.i fastaReader.s: fastaReader.cpp.s .PHONY : fastaReader.s # target to generate assembly for a file fastaReader.cpp.s: cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(MAKE) -f c++/lib/SamMD/CMakeFiles/casava_SamMD.dir/build.make c++/lib/SamMD/CMakeFiles/casava_SamMD.dir/fastaReader.cpp.s .PHONY : fastaReader.cpp.s log.o: log.cpp.o .PHONY : log.o # target to build an object file log.cpp.o: cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(MAKE) -f c++/lib/SamMD/CMakeFiles/casava_SamMD.dir/build.make c++/lib/SamMD/CMakeFiles/casava_SamMD.dir/log.cpp.o .PHONY : log.cpp.o log.i: log.cpp.i .PHONY : log.i # target to preprocess a source file log.cpp.i: cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(MAKE) -f c++/lib/SamMD/CMakeFiles/casava_SamMD.dir/build.make c++/lib/SamMD/CMakeFiles/casava_SamMD.dir/log.cpp.i .PHONY : log.cpp.i log.s: log.cpp.s .PHONY : log.s # target to generate assembly for a file log.cpp.s: cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(MAKE) -f c++/lib/SamMD/CMakeFiles/casava_SamMD.dir/build.make c++/lib/SamMD/CMakeFiles/casava_SamMD.dir/log.cpp.s .PHONY : log.cpp.s samMDlib.o: samMDlib.cpp.o .PHONY : samMDlib.o # target to build an object file samMDlib.cpp.o: cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(MAKE) -f c++/lib/SamMD/CMakeFiles/casava_SamMD.dir/build.make c++/lib/SamMD/CMakeFiles/casava_SamMD.dir/samMDlib.cpp.o .PHONY : samMDlib.cpp.o samMDlib.i: samMDlib.cpp.i .PHONY : samMDlib.i # target to preprocess a source file samMDlib.cpp.i: cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(MAKE) -f c++/lib/SamMD/CMakeFiles/casava_SamMD.dir/build.make c++/lib/SamMD/CMakeFiles/casava_SamMD.dir/samMDlib.cpp.i .PHONY : samMDlib.cpp.i samMDlib.s: samMDlib.cpp.s .PHONY : samMDlib.s # target to generate assembly for a file samMDlib.cpp.s: cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(MAKE) -f c++/lib/SamMD/CMakeFiles/casava_SamMD.dir/build.make c++/lib/SamMD/CMakeFiles/casava_SamMD.dir/samMDlib.cpp.s .PHONY : samMDlib.cpp.s samReader.o: samReader.cpp.o .PHONY : samReader.o # target to build an object file samReader.cpp.o: cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(MAKE) -f c++/lib/SamMD/CMakeFiles/casava_SamMD.dir/build.make c++/lib/SamMD/CMakeFiles/casava_SamMD.dir/samReader.cpp.o .PHONY : samReader.cpp.o samReader.i: samReader.cpp.i .PHONY : samReader.i # target to preprocess a source file samReader.cpp.i: cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(MAKE) -f c++/lib/SamMD/CMakeFiles/casava_SamMD.dir/build.make c++/lib/SamMD/CMakeFiles/casava_SamMD.dir/samReader.cpp.i .PHONY : samReader.cpp.i samReader.s: samReader.cpp.s .PHONY : samReader.s # target to generate assembly for a file samReader.cpp.s: cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(MAKE) -f c++/lib/SamMD/CMakeFiles/casava_SamMD.dir/build.make c++/lib/SamMD/CMakeFiles/casava_SamMD.dir/samReader.cpp.s .PHONY : samReader.cpp.s stdafx.o: stdafx.cpp.o .PHONY : stdafx.o # target to build an object file stdafx.cpp.o: cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(MAKE) -f c++/lib/SamMD/CMakeFiles/casava_SamMD.dir/build.make c++/lib/SamMD/CMakeFiles/casava_SamMD.dir/stdafx.cpp.o .PHONY : stdafx.cpp.o stdafx.i: stdafx.cpp.i .PHONY : stdafx.i # target to preprocess a source file stdafx.cpp.i: cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(MAKE) -f c++/lib/SamMD/CMakeFiles/casava_SamMD.dir/build.make c++/lib/SamMD/CMakeFiles/casava_SamMD.dir/stdafx.cpp.i .PHONY : stdafx.cpp.i stdafx.s: stdafx.cpp.s .PHONY : stdafx.s # target to generate assembly for a file stdafx.cpp.s: cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(MAKE) -f c++/lib/SamMD/CMakeFiles/casava_SamMD.dir/build.make c++/lib/SamMD/CMakeFiles/casava_SamMD.dir/stdafx.cpp.s .PHONY : stdafx.cpp.s stringSplitter.o: stringSplitter.cpp.o .PHONY : stringSplitter.o # target to build an object file stringSplitter.cpp.o: cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(MAKE) -f c++/lib/SamMD/CMakeFiles/casava_SamMD.dir/build.make c++/lib/SamMD/CMakeFiles/casava_SamMD.dir/stringSplitter.cpp.o .PHONY : stringSplitter.cpp.o stringSplitter.i: stringSplitter.cpp.i .PHONY : stringSplitter.i # target to preprocess a source file stringSplitter.cpp.i: cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(MAKE) -f c++/lib/SamMD/CMakeFiles/casava_SamMD.dir/build.make c++/lib/SamMD/CMakeFiles/casava_SamMD.dir/stringSplitter.cpp.i .PHONY : stringSplitter.cpp.i stringSplitter.s: stringSplitter.cpp.s .PHONY : stringSplitter.s # target to generate assembly for a file stringSplitter.cpp.s: cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(MAKE) -f c++/lib/SamMD/CMakeFiles/casava_SamMD.dir/build.make c++/lib/SamMD/CMakeFiles/casava_SamMD.dir/stringSplitter.cpp.s .PHONY : stringSplitter.cpp.s stringSplitterJet.o: stringSplitterJet.cpp.o .PHONY : stringSplitterJet.o # target to build an object file stringSplitterJet.cpp.o: cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(MAKE) -f c++/lib/SamMD/CMakeFiles/casava_SamMD.dir/build.make c++/lib/SamMD/CMakeFiles/casava_SamMD.dir/stringSplitterJet.cpp.o .PHONY : stringSplitterJet.cpp.o stringSplitterJet.i: stringSplitterJet.cpp.i .PHONY : stringSplitterJet.i # target to preprocess a source file stringSplitterJet.cpp.i: cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(MAKE) -f c++/lib/SamMD/CMakeFiles/casava_SamMD.dir/build.make c++/lib/SamMD/CMakeFiles/casava_SamMD.dir/stringSplitterJet.cpp.i .PHONY : stringSplitterJet.cpp.i stringSplitterJet.s: stringSplitterJet.cpp.s .PHONY : stringSplitterJet.s # target to generate assembly for a file stringSplitterJet.cpp.s: cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(MAKE) -f c++/lib/SamMD/CMakeFiles/casava_SamMD.dir/build.make c++/lib/SamMD/CMakeFiles/casava_SamMD.dir/stringSplitterJet.cpp.s .PHONY : stringSplitterJet.cpp.s utils.o: utils.cpp.o .PHONY : utils.o # target to build an object file utils.cpp.o: cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(MAKE) -f c++/lib/SamMD/CMakeFiles/casava_SamMD.dir/build.make c++/lib/SamMD/CMakeFiles/casava_SamMD.dir/utils.cpp.o .PHONY : utils.cpp.o utils.i: utils.cpp.i .PHONY : utils.i # target to preprocess a source file utils.cpp.i: cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(MAKE) -f c++/lib/SamMD/CMakeFiles/casava_SamMD.dir/build.make c++/lib/SamMD/CMakeFiles/casava_SamMD.dir/utils.cpp.i .PHONY : utils.cpp.i utils.s: utils.cpp.s .PHONY : utils.s # target to generate assembly for a file utils.cpp.s: cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(MAKE) -f c++/lib/SamMD/CMakeFiles/casava_SamMD.dir/build.make c++/lib/SamMD/CMakeFiles/casava_SamMD.dir/utils.cpp.s .PHONY : utils.cpp.s # Help Target help: @echo "The following are some of the valid targets for this Makefile:" @echo "... all (the default if no target is provided)" @echo "... clean" @echo "... depend" @echo "... casava_SamMD" @echo "... edit_cache" @echo "... install" @echo "... install/local" @echo "... install/strip" @echo "... list_install_components" @echo "... rebuild_cache" @echo "... test" @echo "... fastaReader.o" @echo "... fastaReader.i" @echo "... fastaReader.s" @echo "... log.o" @echo "... log.i" @echo "... log.s" @echo "... samMDlib.o" @echo "... samMDlib.i" @echo "... samMDlib.s" @echo "... samReader.o" @echo "... samReader.i" @echo "... samReader.s" @echo "... stdafx.o" @echo "... stdafx.i" @echo "... stdafx.s" @echo "... stringSplitter.o" @echo "... stringSplitter.i" @echo "... stringSplitter.s" @echo "... stringSplitterJet.o" @echo "... stringSplitterJet.i" @echo "... stringSplitterJet.s" @echo "... utils.o" @echo "... utils.i" @echo "... utils.s" .PHONY : help #============================================================================= # Special targets to cleanup operation of make. # Special rule to run CMake to check the build system integrity. # No rule that depends on this can have commands that come from listfiles # because they might be regenerated. cmake_check_build_system: cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(CMAKE_COMMAND) -H$(CMAKE_SOURCE_DIR) -B$(CMAKE_BINARY_DIR) --check-build-system CMakeFiles/Makefile.cmake 0 .PHONY : cmake_check_build_system