# CMAKE generated file: DO NOT EDIT! # Generated by "Unix Makefiles" Generator, CMake Version 2.8 # Default target executed when no arguments are given to make. default_target: all .PHONY : default_target #============================================================================= # Special targets provided by cmake. # Disable implicit rules so canoncical targets will work. .SUFFIXES: # Remove some rules from gmake that .SUFFIXES does not remove. SUFFIXES = .SUFFIXES: .hpux_make_needs_suffix_list # Suppress display of executed commands. $(VERBOSE).SILENT: # A target that is always out of date. cmake_force: .PHONY : cmake_force #============================================================================= # Set environment variables for the build. # The shell in which to execute make rules. SHELL = /bin/sh # The CMake executable. CMAKE_COMMAND = /home/psgendb/local/pkg/CASAVA_v1.8.2-build/bootstrap/bin/cmake # The command to remove a file. RM = /home/psgendb/local/pkg/CASAVA_v1.8.2-build/bootstrap/bin/cmake -E remove -f # The program to use to edit the cache. CMAKE_EDIT_COMMAND = /home/psgendb/local/pkg/CASAVA_v1.8.2-build/bootstrap/bin/ccmake # The top-level source directory on which CMake was run. CMAKE_SOURCE_DIR = /home/psgendb/local/pkg/CASAVA_v1.8.2/src # The top-level build directory on which CMake was run. CMAKE_BINARY_DIR = /home/psgendb/local/pkg/CASAVA_v1.8.2-build #============================================================================= # Targets provided globally by CMake. # Special rule for the target edit_cache edit_cache: @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --cyan "Running CMake cache editor..." ../../../bootstrap/bin/ccmake -H$(CMAKE_SOURCE_DIR) -B$(CMAKE_BINARY_DIR) .PHONY : edit_cache # Special rule for the target edit_cache edit_cache/fast: edit_cache .PHONY : edit_cache/fast # Special rule for the target install install: preinstall @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --cyan "Install the project..." ../../../bootstrap/bin/cmake -P cmake_install.cmake .PHONY : install # Special rule for the target install install/fast: preinstall/fast @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --cyan "Install the project..." ../../../bootstrap/bin/cmake -P cmake_install.cmake .PHONY : install/fast # Special rule for the target install/local install/local: preinstall @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --cyan "Installing only the local directory..." ../../../bootstrap/bin/cmake -DCMAKE_INSTALL_LOCAL_ONLY=1 -P cmake_install.cmake .PHONY : install/local # Special rule for the target install/local install/local/fast: install/local .PHONY : install/local/fast # Special rule for the target install/strip install/strip: preinstall @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --cyan "Installing the project stripped..." ../../../bootstrap/bin/cmake -DCMAKE_INSTALL_DO_STRIP=1 -P cmake_install.cmake .PHONY : install/strip # Special rule for the target install/strip install/strip/fast: install/strip .PHONY : install/strip/fast # Special rule for the target list_install_components list_install_components: @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --cyan "Available install components are: \"Unspecified\"" .PHONY : list_install_components # Special rule for the target list_install_components list_install_components/fast: list_install_components .PHONY : list_install_components/fast # Special rule for the target rebuild_cache rebuild_cache: @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --cyan "Running CMake to regenerate build system..." ../../../bootstrap/bin/cmake -H$(CMAKE_SOURCE_DIR) -B$(CMAKE_BINARY_DIR) .PHONY : rebuild_cache # Special rule for the target rebuild_cache rebuild_cache/fast: rebuild_cache .PHONY : rebuild_cache/fast # Special rule for the target test test: @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --cyan "Running tests..." ../../../bootstrap/bin/ctest --force-new-ctest-process $(ARGS) .PHONY : test # Special rule for the target test test/fast: test .PHONY : test/fast # The main all target all: cmake_check_build_system cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(CMAKE_COMMAND) -E cmake_progress_start /home/psgendb/local/pkg/CASAVA_v1.8.2-build/CMakeFiles /home/psgendb/local/pkg/CASAVA_v1.8.2-build/c++/lib/blt_common/CMakeFiles/progress.marks cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(MAKE) -f CMakeFiles/Makefile2 c++/lib/blt_common/all $(CMAKE_COMMAND) -E cmake_progress_start /home/psgendb/local/pkg/CASAVA_v1.8.2-build/CMakeFiles 0 .PHONY : all # The main clean target clean: cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(MAKE) -f CMakeFiles/Makefile2 c++/lib/blt_common/clean .PHONY : clean # The main clean target clean/fast: clean .PHONY : clean/fast # Prepare targets for installation. preinstall: all cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(MAKE) -f CMakeFiles/Makefile2 c++/lib/blt_common/preinstall .PHONY : preinstall # Prepare targets for installation. preinstall/fast: cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(MAKE) -f CMakeFiles/Makefile2 c++/lib/blt_common/preinstall .PHONY : preinstall/fast # clear depends depend: cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(CMAKE_COMMAND) -H$(CMAKE_SOURCE_DIR) -B$(CMAKE_BINARY_DIR) --check-build-system CMakeFiles/Makefile.cmake 1 .PHONY : depend # Convenience name for target. c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/rule: cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(MAKE) -f CMakeFiles/Makefile2 c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/rule .PHONY : c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/rule # Convenience name for target. casava_blt_common: c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/rule .PHONY : casava_blt_common # fast build rule for target. casava_blt_common/fast: cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(MAKE) -f c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/build.make c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/build .PHONY : casava_blt_common/fast adjust_joint_eprob.o: adjust_joint_eprob.cpp.o .PHONY : adjust_joint_eprob.o # target to build an object file adjust_joint_eprob.cpp.o: cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(MAKE) -f c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/build.make c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/adjust_joint_eprob.cpp.o .PHONY : adjust_joint_eprob.cpp.o adjust_joint_eprob.i: adjust_joint_eprob.cpp.i .PHONY : adjust_joint_eprob.i # target to preprocess a source file adjust_joint_eprob.cpp.i: cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(MAKE) -f c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/build.make c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/adjust_joint_eprob.cpp.i .PHONY : adjust_joint_eprob.cpp.i adjust_joint_eprob.s: adjust_joint_eprob.cpp.s .PHONY : adjust_joint_eprob.s # target to generate assembly for a file adjust_joint_eprob.cpp.s: cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(MAKE) -f c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/build.make c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/adjust_joint_eprob.cpp.s .PHONY : adjust_joint_eprob.cpp.s blt_arg_parse.o: blt_arg_parse.cpp.o .PHONY : blt_arg_parse.o # target to build an object file blt_arg_parse.cpp.o: cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(MAKE) -f c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/build.make c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/blt_arg_parse.cpp.o .PHONY : blt_arg_parse.cpp.o blt_arg_parse.i: blt_arg_parse.cpp.i .PHONY : blt_arg_parse.i # target to preprocess a source file blt_arg_parse.cpp.i: cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(MAKE) -f c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/build.make c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/blt_arg_parse.cpp.i .PHONY : blt_arg_parse.cpp.i blt_arg_parse.s: blt_arg_parse.cpp.s .PHONY : blt_arg_parse.s # target to generate assembly for a file blt_arg_parse.cpp.s: cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(MAKE) -f c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/build.make c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/blt_arg_parse.cpp.s .PHONY : blt_arg_parse.cpp.s blt_arg_validate.o: blt_arg_validate.cpp.o .PHONY : blt_arg_validate.o # target to build an object file blt_arg_validate.cpp.o: cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(MAKE) -f c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/build.make c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/blt_arg_validate.cpp.o .PHONY : blt_arg_validate.cpp.o blt_arg_validate.i: blt_arg_validate.cpp.i .PHONY : blt_arg_validate.i # target to preprocess a source file blt_arg_validate.cpp.i: cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(MAKE) -f c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/build.make c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/blt_arg_validate.cpp.i .PHONY : blt_arg_validate.cpp.i blt_arg_validate.s: blt_arg_validate.cpp.s .PHONY : blt_arg_validate.s # target to generate assembly for a file blt_arg_validate.cpp.s: cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(MAKE) -f c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/build.make c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/blt_arg_validate.cpp.s .PHONY : blt_arg_validate.cpp.s blt_shared.o: blt_shared.cpp.o .PHONY : blt_shared.o # target to build an object file blt_shared.cpp.o: cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(MAKE) -f c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/build.make c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/blt_shared.cpp.o .PHONY : blt_shared.cpp.o blt_shared.i: blt_shared.cpp.i .PHONY : blt_shared.i # target to preprocess a source file blt_shared.cpp.i: cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(MAKE) -f c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/build.make c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/blt_shared.cpp.i .PHONY : blt_shared.cpp.i blt_shared.s: blt_shared.cpp.s .PHONY : blt_shared.s # target to generate assembly for a file blt_shared.cpp.s: cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(MAKE) -f c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/build.make c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/blt_shared.cpp.s .PHONY : blt_shared.cpp.s blt_streams.o: blt_streams.cpp.o .PHONY : blt_streams.o # target to build an object file blt_streams.cpp.o: cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(MAKE) -f c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/build.make c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/blt_streams.cpp.o .PHONY : blt_streams.cpp.o blt_streams.i: blt_streams.cpp.i .PHONY : blt_streams.i # target to preprocess a source file blt_streams.cpp.i: cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(MAKE) -f c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/build.make c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/blt_streams.cpp.i .PHONY : blt_streams.cpp.i blt_streams.s: blt_streams.cpp.s .PHONY : blt_streams.s # target to generate assembly for a file blt_streams.cpp.s: cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(MAKE) -f c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/build.make c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/blt_streams.cpp.s .PHONY : blt_streams.cpp.s position_loghood_minfunc.o: position_loghood_minfunc.cpp.o .PHONY : position_loghood_minfunc.o # target to build an object file position_loghood_minfunc.cpp.o: cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(MAKE) -f c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/build.make c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/position_loghood_minfunc.cpp.o .PHONY : position_loghood_minfunc.cpp.o position_loghood_minfunc.i: position_loghood_minfunc.cpp.i .PHONY : position_loghood_minfunc.i # target to preprocess a source file position_loghood_minfunc.cpp.i: cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(MAKE) -f c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/build.make c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/position_loghood_minfunc.cpp.i .PHONY : position_loghood_minfunc.cpp.i position_loghood_minfunc.s: position_loghood_minfunc.cpp.s .PHONY : position_loghood_minfunc.s # target to generate assembly for a file position_loghood_minfunc.cpp.s: cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(MAKE) -f c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/build.make c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/position_loghood_minfunc.cpp.s .PHONY : position_loghood_minfunc.cpp.s position_snp_call_bacon.o: position_snp_call_bacon.cpp.o .PHONY : position_snp_call_bacon.o # target to build an object file position_snp_call_bacon.cpp.o: cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(MAKE) -f c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/build.make c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/position_snp_call_bacon.cpp.o .PHONY : position_snp_call_bacon.cpp.o position_snp_call_bacon.i: position_snp_call_bacon.cpp.i .PHONY : position_snp_call_bacon.i # target to preprocess a source file position_snp_call_bacon.cpp.i: cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(MAKE) -f c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/build.make c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/position_snp_call_bacon.cpp.i .PHONY : position_snp_call_bacon.cpp.i position_snp_call_bacon.s: position_snp_call_bacon.cpp.s .PHONY : position_snp_call_bacon.s # target to generate assembly for a file position_snp_call_bacon.cpp.s: cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(MAKE) -f c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/build.make c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/position_snp_call_bacon.cpp.s .PHONY : position_snp_call_bacon.cpp.s position_snp_call_lrt.o: position_snp_call_lrt.cpp.o .PHONY : position_snp_call_lrt.o # target to build an object file position_snp_call_lrt.cpp.o: cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(MAKE) -f c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/build.make c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/position_snp_call_lrt.cpp.o .PHONY : position_snp_call_lrt.cpp.o position_snp_call_lrt.i: position_snp_call_lrt.cpp.i .PHONY : position_snp_call_lrt.i # target to preprocess a source file position_snp_call_lrt.cpp.i: cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(MAKE) -f c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/build.make c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/position_snp_call_lrt.cpp.i .PHONY : position_snp_call_lrt.cpp.i position_snp_call_lrt.s: position_snp_call_lrt.cpp.s .PHONY : position_snp_call_lrt.s # target to generate assembly for a file position_snp_call_lrt.cpp.s: cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(MAKE) -f c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/build.make c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/position_snp_call_lrt.cpp.s .PHONY : position_snp_call_lrt.cpp.s position_snp_call_pprob_digt.o: position_snp_call_pprob_digt.cpp.o .PHONY : position_snp_call_pprob_digt.o # target to build an object file position_snp_call_pprob_digt.cpp.o: cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(MAKE) -f c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/build.make c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/position_snp_call_pprob_digt.cpp.o .PHONY : position_snp_call_pprob_digt.cpp.o position_snp_call_pprob_digt.i: position_snp_call_pprob_digt.cpp.i .PHONY : position_snp_call_pprob_digt.i # target to preprocess a source file position_snp_call_pprob_digt.cpp.i: cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(MAKE) -f c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/build.make c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/position_snp_call_pprob_digt.cpp.i .PHONY : position_snp_call_pprob_digt.cpp.i position_snp_call_pprob_digt.s: position_snp_call_pprob_digt.cpp.s .PHONY : position_snp_call_pprob_digt.s # target to generate assembly for a file position_snp_call_pprob_digt.cpp.s: cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(MAKE) -f c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/build.make c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/position_snp_call_pprob_digt.cpp.s .PHONY : position_snp_call_pprob_digt.cpp.s position_snp_call_pprob_monogt.o: position_snp_call_pprob_monogt.cpp.o .PHONY : position_snp_call_pprob_monogt.o # target to build an object file position_snp_call_pprob_monogt.cpp.o: cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(MAKE) -f c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/build.make c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/position_snp_call_pprob_monogt.cpp.o .PHONY : position_snp_call_pprob_monogt.cpp.o position_snp_call_pprob_monogt.i: position_snp_call_pprob_monogt.cpp.i .PHONY : position_snp_call_pprob_monogt.i # target to preprocess a source file position_snp_call_pprob_monogt.cpp.i: cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(MAKE) -f c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/build.make c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/position_snp_call_pprob_monogt.cpp.i .PHONY : position_snp_call_pprob_monogt.cpp.i position_snp_call_pprob_monogt.s: position_snp_call_pprob_monogt.cpp.s .PHONY : position_snp_call_pprob_monogt.s # target to generate assembly for a file position_snp_call_pprob_monogt.cpp.s: cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(MAKE) -f c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/build.make c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/position_snp_call_pprob_monogt.cpp.s .PHONY : position_snp_call_pprob_monogt.cpp.s position_snp_call_pprob_nploid.o: position_snp_call_pprob_nploid.cpp.o .PHONY : position_snp_call_pprob_nploid.o # target to build an object file position_snp_call_pprob_nploid.cpp.o: cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(MAKE) -f c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/build.make c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/position_snp_call_pprob_nploid.cpp.o .PHONY : position_snp_call_pprob_nploid.cpp.o position_snp_call_pprob_nploid.i: position_snp_call_pprob_nploid.cpp.i .PHONY : position_snp_call_pprob_nploid.i # target to preprocess a source file position_snp_call_pprob_nploid.cpp.i: cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(MAKE) -f c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/build.make c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/position_snp_call_pprob_nploid.cpp.i .PHONY : position_snp_call_pprob_nploid.cpp.i position_snp_call_pprob_nploid.s: position_snp_call_pprob_nploid.cpp.s .PHONY : position_snp_call_pprob_nploid.s # target to generate assembly for a file position_snp_call_pprob_nploid.cpp.s: cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(MAKE) -f c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/build.make c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/position_snp_call_pprob_nploid.cpp.s .PHONY : position_snp_call_pprob_nploid.cpp.s position_strand_coverage_anomaly.o: position_strand_coverage_anomaly.cpp.o .PHONY : position_strand_coverage_anomaly.o # target to build an object file position_strand_coverage_anomaly.cpp.o: cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(MAKE) -f c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/build.make c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/position_strand_coverage_anomaly.cpp.o .PHONY : position_strand_coverage_anomaly.cpp.o position_strand_coverage_anomaly.i: position_strand_coverage_anomaly.cpp.i .PHONY : position_strand_coverage_anomaly.i # target to preprocess a source file position_strand_coverage_anomaly.cpp.i: cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(MAKE) -f c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/build.make c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/position_strand_coverage_anomaly.cpp.i .PHONY : position_strand_coverage_anomaly.cpp.i position_strand_coverage_anomaly.s: position_strand_coverage_anomaly.cpp.s .PHONY : position_strand_coverage_anomaly.s # target to generate assembly for a file position_strand_coverage_anomaly.cpp.s: cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(MAKE) -f c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/build.make c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/position_strand_coverage_anomaly.cpp.s .PHONY : position_strand_coverage_anomaly.cpp.s position_strand_distro_anomaly.o: position_strand_distro_anomaly.cpp.o .PHONY : position_strand_distro_anomaly.o # target to build an object file position_strand_distro_anomaly.cpp.o: cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(MAKE) -f c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/build.make c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/position_strand_distro_anomaly.cpp.o .PHONY : position_strand_distro_anomaly.cpp.o position_strand_distro_anomaly.i: position_strand_distro_anomaly.cpp.i .PHONY : position_strand_distro_anomaly.i # target to preprocess a source file position_strand_distro_anomaly.cpp.i: cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(MAKE) -f c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/build.make c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/position_strand_distro_anomaly.cpp.i .PHONY : position_strand_distro_anomaly.cpp.i position_strand_distro_anomaly.s: position_strand_distro_anomaly.cpp.s .PHONY : position_strand_distro_anomaly.s # target to generate assembly for a file position_strand_distro_anomaly.cpp.s: cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(MAKE) -f c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/build.make c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/position_strand_distro_anomaly.cpp.s .PHONY : position_strand_distro_anomaly.cpp.s position_strand_distro_anomaly_lrt.o: position_strand_distro_anomaly_lrt.cpp.o .PHONY : position_strand_distro_anomaly_lrt.o # target to build an object file position_strand_distro_anomaly_lrt.cpp.o: cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(MAKE) -f c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/build.make c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/position_strand_distro_anomaly_lrt.cpp.o .PHONY : position_strand_distro_anomaly_lrt.cpp.o position_strand_distro_anomaly_lrt.i: position_strand_distro_anomaly_lrt.cpp.i .PHONY : position_strand_distro_anomaly_lrt.i # target to preprocess a source file position_strand_distro_anomaly_lrt.cpp.i: cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(MAKE) -f c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/build.make c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/position_strand_distro_anomaly_lrt.cpp.i .PHONY : position_strand_distro_anomaly_lrt.cpp.i position_strand_distro_anomaly_lrt.s: position_strand_distro_anomaly_lrt.cpp.s .PHONY : position_strand_distro_anomaly_lrt.s # target to generate assembly for a file position_strand_distro_anomaly_lrt.cpp.s: cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(MAKE) -f c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/build.make c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/position_strand_distro_anomaly_lrt.cpp.s .PHONY : position_strand_distro_anomaly_lrt.cpp.s report_bacon_calls.o: report_bacon_calls.cpp.o .PHONY : report_bacon_calls.o # target to build an object file report_bacon_calls.cpp.o: cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(MAKE) -f c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/build.make c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/report_bacon_calls.cpp.o .PHONY : report_bacon_calls.cpp.o report_bacon_calls.i: report_bacon_calls.cpp.i .PHONY : report_bacon_calls.i # target to preprocess a source file report_bacon_calls.cpp.i: cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(MAKE) -f c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/build.make c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/report_bacon_calls.cpp.i .PHONY : report_bacon_calls.cpp.i report_bacon_calls.s: report_bacon_calls.cpp.s .PHONY : report_bacon_calls.s # target to generate assembly for a file report_bacon_calls.cpp.s: cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(MAKE) -f c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/build.make c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/report_bacon_calls.cpp.s .PHONY : report_bacon_calls.cpp.s snp_pos_info.o: snp_pos_info.cpp.o .PHONY : snp_pos_info.o # target to build an object file snp_pos_info.cpp.o: cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(MAKE) -f c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/build.make c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/snp_pos_info.cpp.o .PHONY : snp_pos_info.cpp.o snp_pos_info.i: snp_pos_info.cpp.i .PHONY : snp_pos_info.i # target to preprocess a source file snp_pos_info.cpp.i: cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(MAKE) -f c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/build.make c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/snp_pos_info.cpp.i .PHONY : snp_pos_info.cpp.i snp_pos_info.s: snp_pos_info.cpp.s .PHONY : snp_pos_info.s # target to generate assembly for a file snp_pos_info.cpp.s: cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(MAKE) -f c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/build.make c++/lib/blt_common/CMakeFiles/casava_blt_common.dir/snp_pos_info.cpp.s .PHONY : snp_pos_info.cpp.s # Help Target help: @echo "The following are some of the valid targets for this Makefile:" @echo "... all (the default if no target is provided)" @echo "... clean" @echo "... depend" @echo "... casava_blt_common" @echo "... edit_cache" @echo "... install" @echo "... install/local" @echo "... install/strip" @echo "... list_install_components" @echo "... rebuild_cache" @echo "... test" @echo "... adjust_joint_eprob.o" @echo "... adjust_joint_eprob.i" @echo "... adjust_joint_eprob.s" @echo "... blt_arg_parse.o" @echo "... blt_arg_parse.i" @echo "... blt_arg_parse.s" @echo "... blt_arg_validate.o" @echo "... blt_arg_validate.i" @echo "... blt_arg_validate.s" @echo "... blt_shared.o" @echo "... blt_shared.i" @echo "... blt_shared.s" @echo "... blt_streams.o" @echo "... blt_streams.i" @echo "... blt_streams.s" @echo "... position_loghood_minfunc.o" @echo "... position_loghood_minfunc.i" @echo "... position_loghood_minfunc.s" @echo "... position_snp_call_bacon.o" @echo "... position_snp_call_bacon.i" @echo "... position_snp_call_bacon.s" @echo "... position_snp_call_lrt.o" @echo "... position_snp_call_lrt.i" @echo "... position_snp_call_lrt.s" @echo "... position_snp_call_pprob_digt.o" @echo "... position_snp_call_pprob_digt.i" @echo "... position_snp_call_pprob_digt.s" @echo "... position_snp_call_pprob_monogt.o" @echo "... position_snp_call_pprob_monogt.i" @echo "... position_snp_call_pprob_monogt.s" @echo "... position_snp_call_pprob_nploid.o" @echo "... position_snp_call_pprob_nploid.i" @echo "... position_snp_call_pprob_nploid.s" @echo "... position_strand_coverage_anomaly.o" @echo "... position_strand_coverage_anomaly.i" @echo "... position_strand_coverage_anomaly.s" @echo "... position_strand_distro_anomaly.o" @echo "... position_strand_distro_anomaly.i" @echo "... position_strand_distro_anomaly.s" @echo "... position_strand_distro_anomaly_lrt.o" @echo "... position_strand_distro_anomaly_lrt.i" @echo "... position_strand_distro_anomaly_lrt.s" @echo "... report_bacon_calls.o" @echo "... report_bacon_calls.i" @echo "... report_bacon_calls.s" @echo "... snp_pos_info.o" @echo "... snp_pos_info.i" @echo "... snp_pos_info.s" .PHONY : help #============================================================================= # Special targets to cleanup operation of make. # Special rule to run CMake to check the build system integrity. # No rule that depends on this can have commands that come from listfiles # because they might be regenerated. cmake_check_build_system: cd /home/psgendb/local/pkg/CASAVA_v1.8.2-build && $(CMAKE_COMMAND) -H$(CMAKE_SOURCE_DIR) -B$(CMAKE_BINARY_DIR) --check-build-system CMakeFiles/Makefile.cmake 0 .PHONY : cmake_check_build_system