/usr/bin/c++    -Wall -Wextra -Wunused -Wno-long-long -Wsign-compare -Wpointer-arith -Wno-unused-parameter  -pedantic  -O2 -g   CMakeFiles/samMD2Export.dir/samMD2Export.cpp.o  -o samMD2Export -rdynamic ../../../lib/smallRna/libcasava_smallRna.a ../../../lib/kagu/libcasava_kagu.a ../../../lib/eland_ms/libcasava_eland_ms.a ../../../lib/SamMD2Export/libcasava_SamMD2Export.a ../../../lib/SamMD/libcasava_SamMD.a ../../../lib/statistics/libcasava_statistics.a ../../../lib/demultiplex/libcasava_demultiplex.a ../../../lib/applications/libcasava_applications.a ../../../lib/variance/libcasava_variance.a ../../../lib/assembly/libcasava_assembly.a ../../../lib/basecalling/libcasava_basecalling.a ../../../lib/alignment/libcasava_alignment.a ../../../lib/io/libcasava_io.a ../../../lib/common/libcasava_common.a ../../../lib/starling/libcasava_starling.a ../../../lib/blt/libcasava_blt.a ../../../lib/blt_common/libcasava_blt_common.a ../../../lib/blt_util/libcasava_blt_util.a ../../../../opt/bootstrap/lib/libboost_date_time.a ../../../../opt/bootstrap/lib/libboost_filesystem.a ../../../../opt/bootstrap/lib/libboost_iostreams.a ../../../../opt/bootstrap/lib/libboost_program_options.a ../../../../opt/bootstrap/lib/libboost_regex.a ../../../../opt/bootstrap/lib/libboost_serialization.a ../../../../opt/bootstrap/lib/libboost_system.a ../../../../opt/bootstrap/lib/libboost_thread.a -lz -lbz2 -lpthread