// -*- mode: c++; indent-tabs-mode: nil; -*-
//
// Copyright 2009 Illumina, Inc.
//
// This software is covered by the "Illumina Genome Analyzer Software
// License Agreement" and the "Illumina Source Code License Agreement",
// and certain third party copyright/licenses, and any user of this
// source file is bound by the terms therein (see accompanying files
// Illumina_Genome_Analyzer_Software_License_Agreement.pdf and
// Illumina_Source_Code_License_Agreement.pdf and third party
// copyright/license notices).
//
//

/// \file

/// \author Chris Saunders
///
#ifndef __BINOMIAL_TEST_HH
#define __BINOMIAL_TEST_HH


bool
is_reject_binomial_p_exact(const double alpha,
                           const double p,
                           const unsigned n_success,
                           const unsigned n_failure);

bool
is_reject_binomial_p_chi_sqr(const double alpha,
                             const double p,
                             const unsigned n_success,
                             const unsigned n_failure);

/// \brief test to reject a binomial with p='p' at FPR<='alpha'
///
/// chooses the testing method to strike a reasonable compromise
/// between efficiency and accuracy
///
bool
is_reject_binomial_p(const double alpha,
                     const double p,
                     const unsigned n_success,
                     const unsigned n_failure);

#endif