/**
 ** Copyright (c) 2007-2009 Illumina, Inc.
 **
 ** This software is covered by the "Illumina Genome Analyzer Software
 ** License Agreement" and the "Illumina Source Code License Agreement",
 ** and certain third party copyright/licenses, and any user of this
 ** source file is bound by the terms therein (see accompanying files
 ** Illumina_Genome_Analyzer_Software_License_Agreement.pdf and
 ** Illumina_Source_Code_License_Agreement.pdf and third party
 ** copyright/license notices).
 **
 ** This file is part of the Consensus Assessment of Sequence And VAriation
 ** (CASAVA) software package.
 **
 ** \file AlignStatsXmlWriter.hh
 **
 ** \brief Writes BCL files and other associated files (filter, position).
 **
 ** \author Roman Petrovski
 **/

#ifndef CASAVA_STATISTICS_ALIGN_STATS_XML_WRITER_H
#define CASAVA_STATISTICS_ALIGN_STATS_XML_WRITER_H

#include <fstream>

#include <boost/filesystem.hpp>
#include <boost/noncopyable.hpp>
#include <boost/property_tree/ptree.hpp>

#include "Stats_Set.h"

namespace casava
{
namespace statistics{

namespace fs=boost::filesystem;

class AlignStatsXmlWriter : public boost::noncopyable
{
    fs::path statsFilePath_;
    std::ofstream os_;
    boost::property_tree::ptree tree_;
public:
    AlignStatsXmlWriter(const fs::path &statsFilePath);
    void addTile(const std::string &sampleName, const std::string &barcode,
                 const unsigned int lane, const unsigned int read,
                 const unsigned int tile, const Stats_Set& tileStats);
    void close();
};

} //namespace statistics
} //namespace casava

#endif //CASAVA_STATISTICS_ALIGN_STATS_XML_WRITER_H