################################################################################
##
## Copyright (c) 2007-2009 Illumina, Inc.
##
## This software is covered by the "Illumina Genome Analyzer Software
## License Agreement" and the "Illumina Source Code License Agreement",
## and certain third party copyright/licenses, and any user of this
## source file is bound by the terms therein (see accompanying files
## Illumina_Genome_Analyzer_Software_License_Agreement.pdf and
## Illumina_Source_Code_License_Agreement.pdf and third party
## copyright/license notices).
##
## This file is part of the Consensus Assessment of Sequence And VAriation 
## (CASAVA) software package.
##
## file CMakeLists.txt
##
## Configuration file for the lib subfolder
##
## author Roman Petrovski
##
################################################################################

##
## List of CASAVA libraries
##
set (CASAVA_ALL_LIBRARIES blt_util blt_common blt starling
                          common io alignment basecalling assembly variance applications
                          demultiplex statistics SamMD SamMD2Export eland_ms kagu
                          smallRna)

##
## Build all the libraries for the project
## CASAVA_AVAILABLE_LIBRARIES is incrementally updated
##

set (CASAVA_AVAILABLE_LIBRARIES "")
set (CASAVA_ALL_LIBRARY_DIRS "")
foreach (CASAVA_LIB_DIR ${CASAVA_ALL_LIBRARIES})
    add_subdirectory(${CASAVA_LIB_DIR})
    set(CASAVA_AVAILABLE_LIBRARIES casava_${CASAVA_LIB_DIR} ${CASAVA_AVAILABLE_LIBRARIES} )
endforeach (CASAVA_LIB_DIR)

set (CASAVA_AVAILABLE_LIBRARIES ${CASAVA_AVAILABLE_LIBRARIES} PARENT_SCOPE)