//
// Copyright 2009 Illumina, Inc.
//
// This software is covered by the "Illumina Genome Analyzer Software
// License Agreement" and the "Illumina Source Code License Agreement",
// and certain third party copyright/licenses, and any user of this
// source file is bound by the terms therein (see accompanying files
// Illumina_Genome_Analyzer_Software_License_Agreement.pdf and
// Illumina_Source_Code_License_Agreement.pdf and third party
// copyright/license notices).
//
//

/// \file

/// \author Ivan Mikoulitch
///

#ifndef __EXPORT_H
#define __EXPORT_H

#include "SamMD2Export/stdafx.h"

struct Export
{
	string Machine; // 1
	string RunNumber; // 2
	string Lane; // 3
	string Tile; // 4
	string XCoordinateCluster; // 5
	string YCoordinateCluster; // 6
	string Index; // 7
	string ReadNumber; // 8
	string Read; // 9
	string QualityString; // 10
	string MatchChromosome; // 11
	string MatchContig; // 12
	string MatchPosition; // 13
	string MatchStrand; // 14
	string MatchDescriptor; // 15
	string SingleReadAlignmentScore; // 16
	string PairedReadAlignmentScore; // 17
	string PartnerChromosome; // 18
	string PartnerContig; // 19
	string PartnerOffset; // 20
	string PartnerStrand; // 21
	string FilteringYN; // 22
};
#endif