################################################################################
##
## Copyright (c) 2007-2009 Illumina, Inc.
##
## This software is covered by the "Illumina Genome Analyzer Software
## License Agreement" and the "Illumina Source Code License Agreement",
## and certain third party copyright/licenses, and any user of this
## source file is bound by the terms therein (see accompanying files
## Illumina_Genome_Analyzer_Software_License_Agreement.pdf and
## Illumina_Source_Code_License_Agreement.pdf and third party
## copyright/license notices).
##
## This file is part of the Consensus Assessment of Sequence And VAriation 
## (CASAVA) software package.
##
## file CMakeLists.txt
##
## Configuration file for the opt/RAMM subfolder
##
## author Come Raczy
##
################################################################################

include ("${CASAVA_GLOBALS_CMAKE}")

install(CODE "
    configure_file(\"${CMAKE_CURRENT_SOURCE_DIR}/sendDiagnosticData.sh.in\" \"${CMAKE_CURRENT_BINARY_DIR}/sendDiagnosticData.sh\" @ONLY)
    configure_file(\"${CMAKE_CURRENT_SOURCE_DIR}/gatherDiagnosticData.sh.in\" \"${CMAKE_CURRENT_BINARY_DIR}/gatherDiagnosticData.sh\" @ONLY)
    configure_file(\"${CMAKE_CURRENT_SOURCE_DIR}/sendEmail.pl.in\" \"${CMAKE_CURRENT_BINARY_DIR}/sendEmail.pl\" @ONLY)
    configure_file(\"${CMAKE_CURRENT_SOURCE_DIR}/RAMMSetup.sh.in\" \"${CMAKE_CURRENT_BINARY_DIR}/RAMMSetup.sh\" @ONLY)
    execute_process(COMMAND \"${CMAKE_CURRENT_BINARY_DIR}/RAMMSetup.sh\" default)
    ")
install(PROGRAMS "${CMAKE_CURRENT_BINARY_DIR}/sendDiagnosticData.sh" DESTINATION "${CASAVA_BINDIR}")
install(PROGRAMS "${CMAKE_CURRENT_BINARY_DIR}/gatherDiagnosticData.sh" DESTINATION "${CASAVA_BINDIR}")
install(PROGRAMS "${CMAKE_CURRENT_BINARY_DIR}/sendEmail.pl" DESTINATION "${CASAVA_BINDIR}")
install(PROGRAMS "${CMAKE_CURRENT_BINARY_DIR}/RAMMSetup.sh" DESTINATION "${CASAVA_BINDIR}")
install(FILES "${CMAKE_CURRENT_SOURCE_DIR}/README.txt" DESTINATION "${CASAVA_DATADIR}/RAMM")